RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 IGSF11Q5DX21 431 aa11.86□□□□□ -0.51
BNIP3-202ENST00000540159 Q6ZRG5 221 aa11.86□□□□□ -0.51
BNIP3-202ENST00000540159 MYPOPQ86VE0 399 aaPredicted RBP11.86□□□□□ -0.51
BNIP3-202ENST00000540159 SVBPQ8N300 66 aa11.86□□□□□ -0.51
BNIP3-202ENST00000540159 SLC30A7Q8NEW0 376 aa11.86□□□□□ -0.51
BNIP3-202ENST00000540159 OR52M1Q8NGK5 317 aa11.86□□□□□ -0.51
BNIP3-202ENST00000540159 RTN4IP1Q8WWV3 396 aaPredicted RBP11.86□□□□□ -0.51
BNIP3-202ENST00000540159 Q96M66 194 aa11.86□□□□□ -0.51
BNIP3-202ENST00000540159 NAA11Q9BSU3 229 aaPredicted RBP11.86□□□□□ -0.51
BNIP3-202ENST00000540159 METTL9Q9H1A3 318 aa11.86□□□□□ -0.51
BNIP3-202ENST00000540159 UQCC1Q9NVA1 299 aa11.86□□□□□ -0.51
BNIP3-202ENST00000540159 FBLN5Q9UBX5 448 aa11.86□□□□□ -0.51
BNIP3-202ENST00000540159 LPAR3Q9UBY5 353 aa11.86□□□□□ -0.51
BNIP3-202ENST00000540159 PILRBQ9UKJ0 227 aa11.86□□□□□ -0.51
BNIP3-202ENST00000540159 DMXL1Q9Y485 3027 aa11.86□□□□□ -0.51
BNIP3-202ENST00000540159 NAT1P18440 290 aa11.86□□□□□ -0.51
BNIP3-202ENST00000540159 ADH6P28332 368 aa11.86□□□□□ -0.51
BNIP3-202ENST00000540159 FOLR3P41439 243 aa11.86□□□□□ -0.51
BNIP3-202ENST00000540159 ACTBL2Q562R1 376 aa11.86□□□□□ -0.51
BNIP3-202ENST00000540159 SLC25A26Q70HW3 274 aa11.86□□□□□ -0.51
BNIP3-202ENST00000540159 UBALD1Q8TB05 177 aa11.86□□□□□ -0.51
BNIP3-202ENST00000540159 PP6455Q8WZ26 134 aa11.86□□□□□ -0.51
BNIP3-202ENST00000540159 TMEM54Q969K7 222 aa11.86□□□□□ -0.51
BNIP3-202ENST00000540159 AKR1E2Q96JD6 320 aa11.86□□□□□ -0.51
BNIP3-202ENST00000540159 ANGPTL4Q9BY76 406 aa11.86□□□□□ -0.51
BNIP3-202ENST00000540159 AMDHD2Q9Y303 409 aa11.86□□□□□ -0.51
BNIP3-202ENST00000540159 V9GYS6 101 aa11.86□□□□□ -0.51
BNIP3-202ENST00000540159 SERPINE3A8MV23 424 aa11.85□□□□□ -0.51
BNIP3-202ENST00000540159 F8VVB4 439 aa11.85□□□□□ -0.51
BNIP3-202ENST00000540159 F8VWA3 439 aa11.85□□□□□ -0.51
BNIP3-202ENST00000540159 H7C2Y5 167 aa11.85□□□□□ -0.51
BNIP3-202ENST00000540159 TNFSF12O43508 249 aa11.85□□□□□ -0.51
BNIP3-202ENST00000540159 CEBPGP53567 150 aa11.85□□□□□ -0.51
BNIP3-202ENST00000540159 GTF3C1Q12789 2109 aa11.85□□□□□ -0.51
BNIP3-202ENST00000540159 SPIN3Q5JUX0 258 aa11.85□□□□□ -0.51
BNIP3-202ENST00000540159 PMS2CLQ68D20 193 aa11.85□□□□□ -0.51
BNIP3-202ENST00000540159 ADPRHL1Q8NDY3 354 aa11.85□□□□□ -0.51
BNIP3-202ENST00000540159 OR1F12Q8NHA8 337 aa11.85□□□□□ -0.51
BNIP3-202ENST00000540159 NEK7Q8TDX7 302 aa11.85□□□□□ -0.51
BNIP3-202ENST00000540159 MAGT1Q9H0U3 335 aa11.85□□□□□ -0.51
BNIP3-202ENST00000540159 SH3BGRL3Q9H299 93 aa11.85□□□□□ -0.51
BNIP3-202ENST00000540159 C1orf123Q9NWV4 160 aa11.85□□□□□ -0.51
BNIP3-202ENST00000540159 FOXD3Q9UJU5 478 aaPredicted RBP11.85□□□□□ -0.51
BNIP3-202ENST00000540159 PHF1O43189 567 aaPredicted RBP11.85□□□□□ -0.51
BNIP3-202ENST00000540159 EIF1BO60739 113 aaKnown RBP11.85□□□□□ -0.51
BNIP3-202ENST00000540159 ZNF728P0DKX0 622 aa11.85□□□□□ -0.51
BNIP3-202ENST00000540159 RBP2P50120 134 aa11.85□□□□□ -0.51
BNIP3-202ENST00000540159 NHLH2Q02577 135 aa11.85□□□□□ -0.51
BNIP3-202ENST00000540159 CLINT1Q14677 625 aa11.85□□□□□ -0.51
BNIP3-202ENST00000540159 SKA3Q8IX90 412 aa11.85□□□□□ -0.51
BNIP3-202ENST00000540159 STOML3Q8TAV4 291 aa11.85□□□□□ -0.51
BNIP3-202ENST00000540159 SECTM1Q8WVN6 248 aa11.85□□□□□ -0.51
BNIP3-202ENST00000540159 NAT6Q93015 286 aa11.85□□□□□ -0.51
BNIP3-202ENST00000540159 SCGB3A2Q96PL1 93 aa11.85□□□□□ -0.51
BNIP3-202ENST00000540159 FOXB1Q99853 325 aa11.85□□□□□ -0.51
BNIP3-202ENST00000540159 A0A0U1RQV5 110 aa11.85□□□□□ -0.51
BNIP3-202ENST00000540159 FAM166BA8MTA8 275 aa11.85□□□□□ -0.51
BNIP3-202ENST00000540159 FGF16O43320 207 aa11.85□□□□□ -0.51
BNIP3-202ENST00000540159 HLA-HP01893 362 aa11.85□□□□□ -0.51
BNIP3-202ENST00000540159 FCGR3AP08637 254 aa11.85□□□□□ -0.51
BNIP3-202ENST00000540159 SFTA3P0C7M3 94 aa11.85□□□□□ -0.51
BNIP3-202ENST00000540159 RAC1P63000 192 aa11.85□□□□□ -0.51
BNIP3-202ENST00000540159 SMCO1Q147U7 214 aa11.85□□□□□ -0.51
BNIP3-202ENST00000540159 KCNMB1Q16558 191 aa11.85□□□□□ -0.51
BNIP3-202ENST00000540159 OR2Y1Q8NGV0 311 aa11.85□□□□□ -0.51
BNIP3-202ENST00000540159 PISDQ9UG56 409 aa11.85□□□□□ -0.51
BNIP3-202ENST00000540159 MGAQ8IWI9 3026 aa11.85□□□□□ -0.51
BNIP3-202ENST00000540159 CACNA1HO95180 2353 aa11.84□□□□□ -0.51
BNIP3-202ENST00000540159 FOXI3A8MTJ6 420 aaPredicted RBP11.84□□□□□ -0.51
BNIP3-202ENST00000540159 CBR3O75828 277 aa11.84□□□□□ -0.51
BNIP3-202ENST00000540159 IFNA21P01568 189 aa11.84□□□□□ -0.51
BNIP3-202ENST00000540159 CLDN15P56746 228 aa11.84□□□□□ -0.51
BNIP3-202ENST00000540159 C10orf128Q5T292 105 aa11.84□□□□□ -0.51
BNIP3-202ENST00000540159 Q6ZPA2 131 aa11.84□□□□□ -0.51
BNIP3-202ENST00000540159 ISOC2Q96AB3 205 aa11.84□□□□□ -0.51
BNIP3-202ENST00000540159 CNTNAP3Q9BZ76 1288 aa11.84□□□□□ -0.51
BNIP3-202ENST00000540159 CALHM2Q9HA72 323 aa11.84□□□□□ -0.51
BNIP3-202ENST00000540159 SYNGR3O43761 229 aa11.84□□□□□ -0.51
BNIP3-202ENST00000540159 ONECUT2O95948 504 aa11.84□□□□□ -0.51
BNIP3-202ENST00000540159 MBPP02686 304 aaPredicted RBP11.84□□□□□ -0.51
BNIP3-202ENST00000540159 PRH1P02810 166 aa11.84□□□□□ -0.51
BNIP3-202ENST00000540159 FGF5P12034 268 aa11.84□□□□□ -0.51
BNIP3-202ENST00000540159 CBR1P16152 277 aa11.84□□□□□ -0.51
BNIP3-202ENST00000540159 CBX5P45973 191 aa11.84□□□□□ -0.51
BNIP3-202ENST00000540159 FAM27BQ5VT28 67 aa11.84□□□□□ -0.51
BNIP3-202ENST00000540159 NSUN5P2Q63ZY6 315 aa11.84□□□□□ -0.51
BNIP3-202ENST00000540159 AIFM2Q9BRQ8 373 aa11.84□□□□□ -0.51
BNIP3-202ENST00000540159 PLA2G3Q9NZ20 509 aa11.84□□□□□ -0.51
BNIP3-202ENST00000540159 PURGQ9UJV8 347 aaKnown RBP11.84□□□□□ -0.51
BNIP3-202ENST00000540159 TRBV6-7A0A0A0MS04 114 aa11.83□□□□□ -0.52
BNIP3-202ENST00000540159 TRAV39A0A0B4J263 110 aa11.83□□□□□ -0.52
BNIP3-202ENST00000540159 CD79AP11912 226 aa11.83□□□□□ -0.52
BNIP3-202ENST00000540159 PJVKQ0ZLH3 352 aa11.83□□□□□ -0.52
BNIP3-202ENST00000540159 SWI5Q1ZZU3 235 aa11.83□□□□□ -0.52
BNIP3-202ENST00000540159 PABPC1L2AQ5JQF8 200 aa11.83□□□□□ -0.52
BNIP3-202ENST00000540159 ZNF488Q96MN9 340 aa11.83□□□□□ -0.52
BNIP3-202ENST00000540159 PRRX2Q99811 253 aa11.83□□□□□ -0.52
BNIP3-202ENST00000540159 SLC2A9Q9NRM0 540 aa11.83□□□□□ -0.52
BNIP3-202ENST00000540159 TMEM38BQ9NVV0 291 aa11.83□□□□□ -0.52
BNIP3-202ENST00000540159 KCNJ3P48549 501 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms