RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 EIF3IQ13347 325 aaKnown RBP9.97□□□□□ -0.81
C11orf54-214ENST00000540113 PHLDA2Q53GA4 152 aa9.97□□□□□ -0.81
C11orf54-214ENST00000540113 PABPC1L2AQ5JQF8 200 aa9.97□□□□□ -0.81
C11orf54-214ENST00000540113 PLCXD3Q63HM9 321 aa9.97□□□□□ -0.81
C11orf54-214ENST00000540113 RPL7L1Q6DKI1 246 aaKnown RBP9.97□□□□□ -0.81
C11orf54-214ENST00000540113 SLC22A25Q6T423 547 aa9.97□□□□□ -0.81
C11orf54-214ENST00000540113 LRFN1Q9P244 771 aa9.97□□□□□ -0.81
C11orf54-214ENST00000540113 LSM5Q9Y4Y9 91 aaKnown RBP9.97□□□□□ -0.81
C11orf54-214ENST00000540113 TIMM10BQ9Y5J6 103 aa9.97□□□□□ -0.81
C11orf54-214ENST00000540113 R4GN57 208 aa9.97□□□□□ -0.81
C11orf54-214ENST00000540113 DNASE2O00115 360 aaPredicted RBP9.97□□□□□ -0.81
C11orf54-214ENST00000540113 GPR31O00270 319 aa9.97□□□□□ -0.81
C11orf54-214ENST00000540113 ABCD4O14678 606 aa9.97□□□□□ -0.81
C11orf54-214ENST00000540113 NEURL1O76050 574 aa9.97□□□□□ -0.81
C11orf54-214ENST00000540113 FCGR3AP08637 254 aa9.97□□□□□ -0.81
C11orf54-214ENST00000540113 NPBWR2P48146 333 aa9.97□□□□□ -0.81
C11orf54-214ENST00000540113 Q6ZPA2 131 aa9.97□□□□□ -0.81
C11orf54-214ENST00000540113 OR11L1Q8NGX0 322 aa9.97□□□□□ -0.81
C11orf54-214ENST00000540113 LDAHQ9H6V9 325 aa9.97□□□□□ -0.81
C11orf54-214ENST00000540113 ZNF629Q9UEG4 869 aaPredicted RBP9.97□□□□□ -0.81
C11orf54-214ENST00000540113 ST3GAL6Q9Y274 331 aa9.97□□□□□ -0.81
C11orf54-214ENST00000540113 MRPS18CQ9Y3D5 142 aaKnown RBP9.97□□□□□ -0.81
C11orf54-214ENST00000540113 ZNF407Q9C0G0 2248 aa9.96□□□□□ -0.81
C11orf54-214ENST00000540113 hCG_38984A0A1B0GV85 526 aa9.96□□□□□ -0.81
C11orf54-214ENST00000540113 A0A1B0GW55 424 aa9.96□□□□□ -0.81
C11orf54-214ENST00000540113 FGF16O43320 207 aa9.96□□□□□ -0.81
C11orf54-214ENST00000540113 DUX4L2P0CJ85 424 aa9.96□□□□□ -0.81
C11orf54-214ENST00000540113 DUX4L3P0CJ86 424 aa9.96□□□□□ -0.81
C11orf54-214ENST00000540113 DUX4L4P0CJ87 422 aa9.96□□□□□ -0.81
C11orf54-214ENST00000540113 DUX4L5P0CJ88 424 aa9.96□□□□□ -0.81
C11orf54-214ENST00000540113 DUX4L6P0CJ89 424 aa9.96□□□□□ -0.81
C11orf54-214ENST00000540113 DUX4L7P0CJ90 424 aa9.96□□□□□ -0.81
C11orf54-214ENST00000540113 ZNF708P17019 499 aa9.96□□□□□ -0.81
C11orf54-214ENST00000540113 ADCYAP1P18509 176 aa9.96□□□□□ -0.81
C11orf54-214ENST00000540113 CHATP28329 748 aa9.96□□□□□ -0.81
C11orf54-214ENST00000540113 ID4P47928 161 aa9.96□□□□□ -0.81
C11orf54-214ENST00000540113 PIGPP57054 158 aa9.96□□□□□ -0.81
C11orf54-214ENST00000540113 IL15RAQ13261 267 aa9.96□□□□□ -0.81
C11orf54-214ENST00000540113 CNN3Q15417 329 aaKnown RBP9.96□□□□□ -0.81
C11orf54-214ENST00000540113 C3AR1Q16581 482 aa9.96□□□□□ -0.81
C11orf54-214ENST00000540113 GUCA2BQ16661 112 aa9.96□□□□□ -0.81
C11orf54-214ENST00000540113 KRTAP27-1Q3LI81 207 aa9.96□□□□□ -0.81
C11orf54-214ENST00000540113 GGNBP1Q5YKI7 109 aa9.96□□□□□ -0.81
C11orf54-214ENST00000540113 SLC30A7Q8NEW0 376 aa9.96□□□□□ -0.81
C11orf54-214ENST00000540113 LHFPL5Q8TAF8 219 aa9.96□□□□□ -0.81
C11orf54-214ENST00000540113 STOML3Q8TAV4 291 aa9.96□□□□□ -0.81
C11orf54-214ENST00000540113 SPSB1Q96BD6 273 aa9.96□□□□□ -0.81
C11orf54-214ENST00000540113 HS3ST6Q96QI5 342 aa9.96□□□□□ -0.81
C11orf54-214ENST00000540113 SLC5A7Q9GZV3 580 aa9.96□□□□□ -0.81
C11orf54-214ENST00000540113 PARP12Q9H0J9 701 aaKnown RBP9.96□□□□□ -0.81
C11orf54-214ENST00000540113 HRH4Q9H3N8 390 aa9.96□□□□□ -0.81
C11orf54-214ENST00000540113 CALHM2Q9HA72 323 aa9.96□□□□□ -0.81
C11orf54-214ENST00000540113 DUX4Q9UBX2 424 aa9.96□□□□□ -0.81
C11orf54-214ENST00000540113 KMT2EQ8IZD2 1858 aa9.96□□□□□ -0.81
C11orf54-214ENST00000540113 ZNF503-AS2A6NEH8 195 aa9.96□□□□□ -0.82
C11orf54-214ENST00000540113 ZNF705EA8MWA4 302 aaPredicted RBP9.96□□□□□ -0.82
C11orf54-214ENST00000540113 FAM157CP0CG43 387 aa9.96□□□□□ -0.82
C11orf54-214ENST00000540113 LINC00696Q6ZRV3 163 aa9.96□□□□□ -0.82
C11orf54-214ENST00000540113 SGPP2Q8IWX5 399 aa9.96□□□□□ -0.82
C11orf54-214ENST00000540113 OSR2Q8N2R0 312 aa9.96□□□□□ -0.82
C11orf54-214ENST00000540113 C10orf35Q96D05 121 aa9.96□□□□□ -0.82
C11orf54-214ENST00000540113 BSCL2Q96G97 398 aaPredicted RBP9.96□□□□□ -0.82
C11orf54-214ENST00000540113 DNTTIP1Q9H147 329 aa9.96□□□□□ -0.82
C11orf54-214ENST00000540113 SLC7A10Q9NS82 523 aa9.96□□□□□ -0.82
C11orf54-214ENST00000540113 FAM96BQ9Y3D0 163 aa9.96□□□□□ -0.82
C11orf54-214ENST00000540113 DOCK7Q96N67 2140 aa9.96□□□□□ -0.82
C11orf54-214ENST00000540113 CYTIPO60759 359 aa9.95□□□□□ -0.82
C11orf54-214ENST00000540113 FBXO24O75426 580 aa9.95□□□□□ -0.82
C11orf54-214ENST00000540113 HLA-HP01893 362 aa9.95□□□□□ -0.82
C11orf54-214ENST00000540113 OR5AC1P0C628 307 aa9.95□□□□□ -0.82
C11orf54-214ENST00000540113 HKR1P10072 659 aa9.95□□□□□ -0.82
C11orf54-214ENST00000540113 NME2P22392 152 aa9.95□□□□□ -0.82
C11orf54-214ENST00000540113 FCGR2CP31995 323 aa9.95□□□□□ -0.82
C11orf54-214ENST00000540113 ARF1P84077 181 aaKnown RBP9.95□□□□□ -0.82
C11orf54-214ENST00000540113 PDZK1IP1Q13113 114 aa9.95□□□□□ -0.82
C11orf54-214ENST00000540113 IGFBP7Q16270 282 aa9.95□□□□□ -0.82
C11orf54-214ENST00000540113 TMEM88Q6PEY1 159 aa9.95□□□□□ -0.82
C11orf54-214ENST00000540113 TUSC5Q8IXB3 177 aa9.95□□□□□ -0.82
C11orf54-214ENST00000540113 OR2M7Q8NG81 312 aa9.95□□□□□ -0.82
C11orf54-214ENST00000540113 OR5L1Q8NGL2 311 aa9.95□□□□□ -0.82
C11orf54-214ENST00000540113 OR4A4PQ8NGN8 299 aa9.95□□□□□ -0.82
C11orf54-214ENST00000540113 CPNE2Q96FN4 548 aaPredicted RBP9.95□□□□□ -0.82
C11orf54-214ENST00000540113 SLC6A15Q9H2J7 730 aa9.95□□□□□ -0.82
C11orf54-214ENST00000540113 ZNF703Q9H7S9 590 aaPredicted RBP9.95□□□□□ -0.82
C11orf54-214ENST00000540113 C1orf123Q9NWV4 160 aa9.95□□□□□ -0.82
C11orf54-214ENST00000540113 NOSIPQ9Y314 301 aaKnown RBP9.95□□□□□ -0.82
C11orf54-214ENST00000540113 SHANK1Q9Y566 2161 aa9.95□□□□□ -0.82
C11orf54-214ENST00000540113 DNAJC13O75165 2243 aa9.95□□□□□ -0.82
C11orf54-214ENST00000540113 CRYM-AS1A6NIL9 109 aa9.95□□□□□ -0.82
C11orf54-214ENST00000540113 ATP6V1G2-DDX39BF2Z307 99 aa9.95□□□□□ -0.82
C11orf54-214ENST00000540113 HSPB6O14558 160 aa9.95□□□□□ -0.82
C11orf54-214ENST00000540113 AGPAT2O15120 278 aa9.95□□□□□ -0.82
C11orf54-214ENST00000540113 LRP3O75074 770 aa9.95□□□□□ -0.82
C11orf54-214ENST00000540113 DIRAS3O95661 229 aa9.95□□□□□ -0.82
C11orf54-214ENST00000540113 CTSDP07339 412 aaPredicted RBP9.95□□□□□ -0.82
C11orf54-214ENST00000540113 MMP7P09237 267 aaPredicted RBP9.95□□□□□ -0.82
C11orf54-214ENST00000540113 ZNF806P0C7X5 589 aa9.95□□□□□ -0.82
C11orf54-214ENST00000540113 ZNF728P0DKX0 622 aa9.95□□□□□ -0.82
C11orf54-214ENST00000540113 CD79AP11912 226 aa9.95□□□□□ -0.82
C11orf54-214ENST00000540113 LYL1P12980 280 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms