RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 SIGLEC5O15389 551 aa12.66□□□□□ -0.38
CDCA3-207ENST00000538862 SERPINA5P05154 406 aa12.66□□□□□ -0.38
CDCA3-207ENST00000538862 CTSDP07339 412 aaPredicted RBP12.66□□□□□ -0.38
CDCA3-207ENST00000538862 CRYGSP22914 178 aa12.66□□□□□ -0.38
CDCA3-207ENST00000538862 RBMXP38159 391 aaKnown RBP12.66□□□□□ -0.38
CDCA3-207ENST00000538862 RAB35Q15286 201 aa12.66□□□□□ -0.38
CDCA3-207ENST00000538862 EIF5AL1Q6IS14 154 aaKnown RBP12.66□□□□□ -0.38
CDCA3-207ENST00000538862 PLXDC2Q6UX71 529 aa12.66□□□□□ -0.38
CDCA3-207ENST00000538862 IL22RA1Q8N6P7 574 aa12.66□□□□□ -0.38
CDCA3-207ENST00000538862 BOLLQ8N9W6 283 aaKnown RBP12.66□□□□□ -0.38
CDCA3-207ENST00000538862 TMED6Q8WW62 240 aa12.66□□□□□ -0.38
CDCA3-207ENST00000538862 MAFIPQ8WZ33 124 aa12.66□□□□□ -0.38
CDCA3-207ENST00000538862 FBXO17Q96EF6 278 aa12.66□□□□□ -0.38
CDCA3-207ENST00000538862 SPRY4Q9C004 299 aa12.66□□□□□ -0.38
CDCA3-207ENST00000538862 METTL9Q9H1A3 318 aa12.66□□□□□ -0.38
CDCA3-207ENST00000538862 PCDHB16Q9NRJ7 776 aa12.66□□□□□ -0.38
CDCA3-207ENST00000538862 ZNF629Q9UEG4 869 aaPredicted RBP12.66□□□□□ -0.38
CDCA3-207ENST00000538862 PURGQ9UJV8 347 aaKnown RBP12.66□□□□□ -0.38
CDCA3-207ENST00000538862 HSF4Q9ULV5 492 aa12.66□□□□□ -0.38
CDCA3-207ENST00000538862 KIAA1549Q9HCM3 1950 aa12.66□□□□□ -0.38
CDCA3-207ENST00000538862 FAM74A7A6NL05 159 aa12.65□□□□□ -0.38
CDCA3-207ENST00000538862 C9J4A7 227 aa12.65□□□□□ -0.38
CDCA3-207ENST00000538862 KLF7O75840 302 aaPredicted RBP12.65□□□□□ -0.38
CDCA3-207ENST00000538862 DBHP09172 617 aa12.65□□□□□ -0.38
CDCA3-207ENST00000538862 PTGER4P35408 488 aa12.65□□□□□ -0.38
CDCA3-207ENST00000538862 ARHGDIBP52566 201 aa12.65□□□□□ -0.38
CDCA3-207ENST00000538862 MLF1P58340 268 aa12.65□□□□□ -0.38
CDCA3-207ENST00000538862 FAM74A3Q4VXF1 159 aa12.65□□□□□ -0.38
CDCA3-207ENST00000538862 RPUSD3Q6P087 351 aaKnown RBP12.65□□□□□ -0.38
CDCA3-207ENST00000538862 C6orf201Q7Z4U5 140 aa12.65□□□□□ -0.38
CDCA3-207ENST00000538862 RPS19BP1Q86WX3 136 aaKnown RBP12.65□□□□□ -0.38
CDCA3-207ENST00000538862 SGPP2Q8IWX5 399 aa12.65□□□□□ -0.38
CDCA3-207ENST00000538862 GPR137CQ8N3F9 429 aa12.65□□□□□ -0.38
CDCA3-207ENST00000538862 TMEM156Q8N614 296 aa12.65□□□□□ -0.38
CDCA3-207ENST00000538862 BHLHE23Q8NDY6 225 aa12.65□□□□□ -0.38
CDCA3-207ENST00000538862 ADAMTS17Q8TE56 1095 aa12.65□□□□□ -0.38
CDCA3-207ENST00000538862 ZNF701Q9NV72 531 aaPredicted RBP12.65□□□□□ -0.38
CDCA3-207ENST00000538862 LPAR3Q9UBY5 353 aa12.65□□□□□ -0.38
CDCA3-207ENST00000538862 MCTS1Q9ULC4 181 aaKnown RBP12.65□□□□□ -0.38
CDCA3-207ENST00000538862 CARHSP1Q9Y2V2 147 aaKnown RBP12.65□□□□□ -0.38
CDCA3-207ENST00000538862 KLF2Q9Y5W3 355 aaPredicted RBP12.65□□□□□ -0.38
CDCA3-207ENST00000538862 HS3ST3B1Q9Y662 390 aa12.65□□□□□ -0.38
CDCA3-207ENST00000538862 TNFSF11O14788 317 aa12.64□□□□□ -0.39
CDCA3-207ENST00000538862 SGCEO43556 437 aa12.64□□□□□ -0.39
CDCA3-207ENST00000538862 ACTL6AO96019 429 aa12.64□□□□□ -0.39
CDCA3-207ENST00000538862 PLATP00750 562 aa12.64□□□□□ -0.39
CDCA3-207ENST00000538862 KNG1P01042 644 aa12.64□□□□□ -0.39
CDCA3-207ENST00000538862 HOXB5P09067 269 aa12.64□□□□□ -0.39
CDCA3-207ENST00000538862 CST2P09228 141 aa12.64□□□□□ -0.39
CDCA3-207ENST00000538862 H2AFB1P0C5Y9 115 aa12.64□□□□□ -0.39
CDCA3-207ENST00000538862 TMEM225BP0DP42 221 aa12.64□□□□□ -0.39
CDCA3-207ENST00000538862 UCNP55089 124 aa12.64□□□□□ -0.39
CDCA3-207ENST00000538862 MTCP1P56278 107 aa12.64□□□□□ -0.39
CDCA3-207ENST00000538862 RAC3P60763 192 aa12.64□□□□□ -0.39
CDCA3-207ENST00000538862 RELQ04864 619 aaPredicted RBP12.64□□□□□ -0.39
CDCA3-207ENST00000538862 CNN3Q15417 329 aaKnown RBP12.64□□□□□ -0.39
CDCA3-207ENST00000538862 SNAI3Q3KNW1 292 aa12.64□□□□□ -0.39
CDCA3-207ENST00000538862 BBC3Q96PG8 261 aaPredicted RBP12.64□□□□□ -0.39
CDCA3-207ENST00000538862 ZPBPQ9BS86 351 aa12.64□□□□□ -0.39
CDCA3-207ENST00000538862 ZNF2Q9BSG1 426 aaPredicted RBP12.64□□□□□ -0.39
CDCA3-207ENST00000538862 HPF1Q9NWY4 346 aa12.64□□□□□ -0.39
CDCA3-207ENST00000538862 PPP1R14DQ9NXH3 145 aa12.64□□□□□ -0.39
CDCA3-207ENST00000538862 GSKIPQ9P0R6 139 aa12.64□□□□□ -0.39
CDCA3-207ENST00000538862 ANXA10Q9UJ72 324 aa12.64□□□□□ -0.39
CDCA3-207ENST00000538862 IGKV1D-8A0A087WSZ0 117 aa12.64□□□□□ -0.39
CDCA3-207ENST00000538862 ZNF705EA8MWA4 302 aaPredicted RBP12.64□□□□□ -0.39
CDCA3-207ENST00000538862 K7ENP7 123 aa12.64□□□□□ -0.39
CDCA3-207ENST00000538862 SYNGR3O43761 229 aa12.64□□□□□ -0.39
CDCA3-207ENST00000538862 DTYMKP23919 212 aa12.64□□□□□ -0.39
CDCA3-207ENST00000538862 GABRR1P24046 479 aa12.64□□□□□ -0.39
CDCA3-207ENST00000538862 PJVKQ0ZLH3 352 aa12.64□□□□□ -0.39
CDCA3-207ENST00000538862 RBM39Q14498 530 aaKnown RBP12.64□□□□□ -0.39
CDCA3-207ENST00000538862 MST1LQ2TV78 715 aa12.64□□□□□ -0.39
CDCA3-207ENST00000538862 Q3ZCU0 254 aa12.64□□□□□ -0.39
CDCA3-207ENST00000538862 INO80CQ6PI98 192 aaPredicted RBP12.64□□□□□ -0.39
CDCA3-207ENST00000538862 ASCL4Q6XD76 172 aa12.64□□□□□ -0.39
CDCA3-207ENST00000538862 OR2Y1Q8NGV0 311 aa12.64□□□□□ -0.39
CDCA3-207ENST00000538862 OR51F2Q8NH61 342 aa12.64□□□□□ -0.39
CDCA3-207ENST00000538862 SMIM8Q96KF7 97 aa12.64□□□□□ -0.39
CDCA3-207ENST00000538862 JSRP1Q96MG2 331 aaPredicted RBP12.64□□□□□ -0.39
CDCA3-207ENST00000538862 GPR173Q9NS66 373 aa12.64□□□□□ -0.39
CDCA3-207ENST00000538862 KALRNO60229 2985 aa12.63□□□□□ -0.39
CDCA3-207ENST00000538862 RTTNQ86VV8 2226 aa12.63□□□□□ -0.39
CDCA3-207ENST00000538862 CRYM-AS1A6NIL9 109 aa12.63□□□□□ -0.39
CDCA3-207ENST00000538862 SFTPBP07988 381 aa12.63□□□□□ -0.39
CDCA3-207ENST00000538862 HKR1P10072 659 aa12.63□□□□□ -0.39
CDCA3-207ENST00000538862 ADCYAP1P18509 176 aa12.63□□□□□ -0.39
CDCA3-207ENST00000538862 S100A10P60903 97 aa12.63□□□□□ -0.39
CDCA3-207ENST00000538862 DHRS11Q6UWP2 260 aa12.63□□□□□ -0.39
CDCA3-207ENST00000538862 PUSL1Q8N0Z8 303 aaKnown RBP12.63□□□□□ -0.39
CDCA3-207ENST00000538862 ZNF837Q96EG3 531 aaPredicted RBP12.63□□□□□ -0.39
CDCA3-207ENST00000538862 REEP6Q96HR9 211 aa12.63□□□□□ -0.39
CDCA3-207ENST00000538862 SGCZQ96LD1 299 aa12.63□□□□□ -0.39
CDCA3-207ENST00000538862 SEC11CQ9BY50 192 aa12.63□□□□□ -0.39
CDCA3-207ENST00000538862 SRXN1Q9BYN0 137 aa12.63□□□□□ -0.39
CDCA3-207ENST00000538862 TUBD1Q9UJT1 453 aa12.63□□□□□ -0.39
CDCA3-207ENST00000538862 NSG1A0A0A6YYJ2 146 aa12.62□□□□□ -0.39
CDCA3-207ENST00000538862 IFNA21P01568 189 aa12.62□□□□□ -0.39
CDCA3-207ENST00000538862 ACKR3P25106 362 aa12.62□□□□□ -0.39
CDCA3-207ENST00000538862 SRD5A2P31213 254 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms