RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 CHATP28329 748 aa12.09□□□□□ -0.47
ACTN1-205ENST00000538545 CEACAM21Q3KPI0 293 aa12.09□□□□□ -0.47
ACTN1-205ENST00000538545 ZNF474Q6S9Z5 364 aaPredicted RBP12.09□□□□□ -0.47
ACTN1-205ENST00000538545 WDR86Q86TI4 376 aa12.09□□□□□ -0.47
ACTN1-205ENST00000538545 CCDC54Q8NEL0 328 aa12.09□□□□□ -0.47
ACTN1-205ENST00000538545 OR6K3Q8NGY3 331 aa12.09□□□□□ -0.47
ACTN1-205ENST00000538545 OR13G1Q8NGZ3 307 aa12.09□□□□□ -0.47
ACTN1-205ENST00000538545 ZNF431Q8TF32 576 aaPredicted RBP12.09□□□□□ -0.47
ACTN1-205ENST00000538545 RAXQ9Y2V3 346 aa12.09□□□□□ -0.47
ACTN1-205ENST00000538545 LRBAP50851 2863 aa12.08□□□□□ -0.48
ACTN1-205ENST00000538545 CECR9P0C854 216 aa12.08□□□□□ -0.48
ACTN1-205ENST00000538545 BMP5P22003 454 aa12.08□□□□□ -0.48
ACTN1-205ENST00000538545 ERP29P30040 261 aaKnown RBP12.08□□□□□ -0.48
ACTN1-205ENST00000538545 FABP6P51161 128 aa12.08□□□□□ -0.48
ACTN1-205ENST00000538545 MECP2P51608 486 aaKnown RBP12.08□□□□□ -0.48
ACTN1-205ENST00000538545 PSG7Q13046 419 aa12.08□□□□□ -0.48
ACTN1-205ENST00000538545 TBR1Q16650 682 aa12.08□□□□□ -0.48
ACTN1-205ENST00000538545 C11orf88Q6PI97 169 aa12.08□□□□□ -0.48
ACTN1-205ENST00000538545 C9orf62Q8N4C0 152 aa12.08□□□□□ -0.48
ACTN1-205ENST00000538545 OR2AK2Q8NG84 335 aa12.08□□□□□ -0.48
ACTN1-205ENST00000538545 OR5H2Q8NGV7 314 aa12.08□□□□□ -0.48
ACTN1-205ENST00000538545 CMSS1Q9BQ75 279 aaKnown RBP12.08□□□□□ -0.48
ACTN1-205ENST00000538545 OCSTAMPQ9BR26 566 aa12.08□□□□□ -0.48
ACTN1-205ENST00000538545 GPN1Q9HCN4 374 aaPredicted RBP12.08□□□□□ -0.48
ACTN1-205ENST00000538545 PLSCR4Q9NRQ2 329 aa12.08□□□□□ -0.48
ACTN1-205ENST00000538545 ANKRD30BLA7E2S9 258 aa12.08□□□□□ -0.48
ACTN1-205ENST00000538545 IL5P05113 134 aa12.08□□□□□ -0.48
ACTN1-205ENST00000538545 COX5AP20674 150 aa12.08□□□□□ -0.48
ACTN1-205ENST00000538545 OR3A3P47888 321 aa12.08□□□□□ -0.48
ACTN1-205ENST00000538545 RBM11P57052 281 aaKnown RBP12.08□□□□□ -0.48
ACTN1-205ENST00000538545 MEF2DQ14814 521 aa12.08□□□□□ -0.48
ACTN1-205ENST00000538545 ZSCAN4Q8NAM6 433 aaPredicted RBP12.08□□□□□ -0.48
ACTN1-205ENST00000538545 DEDD2Q8WXF8 326 aa12.08□□□□□ -0.48
ACTN1-205ENST00000538545 SEC22AQ96IW7 307 aa12.08□□□□□ -0.48
ACTN1-205ENST00000538545 PRRT1Q99946 306 aa12.08□□□□□ -0.48
ACTN1-205ENST00000538545 OR5H14A6NHG9 310 aa12.07□□□□□ -0.48
ACTN1-205ENST00000538545 TFF1P04155 84 aa12.07□□□□□ -0.48
ACTN1-205ENST00000538545 HOXC12P31275 282 aa12.07□□□□□ -0.48
ACTN1-205ENST00000538545 UCP2P55851 309 aa12.07□□□□□ -0.48
ACTN1-205ENST00000538545 ASCL4Q6XD76 172 aa12.07□□□□□ -0.48
ACTN1-205ENST00000538545 HOGA1Q86XE5 327 aa12.07□□□□□ -0.48
ACTN1-205ENST00000538545 ZFAND1Q8TCF1 268 aa12.07□□□□□ -0.48
ACTN1-205ENST00000538545 OR5P3Q8WZ94 311 aa12.07□□□□□ -0.48
ACTN1-205ENST00000538545 SLC25A21Q9BQT8 299 aaPredicted RBP12.07□□□□□ -0.48
ACTN1-205ENST00000538545 NUDT16L1Q9BRJ7 211 aaKnown RBP12.07□□□□□ -0.48
ACTN1-205ENST00000538545 ZNF442Q9H7R0 627 aa12.07□□□□□ -0.48
ACTN1-205ENST00000538545 MBD3L4A6NDZ8 208 aaPredicted RBP12.07□□□□□ -0.48
ACTN1-205ENST00000538545 MBD3L3A6NE82 208 aaPredicted RBP12.07□□□□□ -0.48
ACTN1-205ENST00000538545 MBD3L5A6NJ08 208 aaPredicted RBP12.07□□□□□ -0.48
ACTN1-205ENST00000538545 SLC22A5O76082 557 aa12.07□□□□□ -0.48
ACTN1-205ENST00000538545 GLI4P10075 376 aa12.07□□□□□ -0.48
ACTN1-205ENST00000538545 GLRA1P23415 457 aa12.07□□□□□ -0.48
ACTN1-205ENST00000538545 CALCRP30988 508 aa12.07□□□□□ -0.48
ACTN1-205ENST00000538545 PNLIPRP3Q17RR3 467 aa12.07□□□□□ -0.48
ACTN1-205ENST00000538545 AADACL3Q5VUY0 350 aa12.07□□□□□ -0.48
ACTN1-205ENST00000538545 FAM180AQ6UWF9 173 aa12.07□□□□□ -0.48
ACTN1-205ENST00000538545 KCTD9Q7L273 389 aa12.07□□□□□ -0.48
ACTN1-205ENST00000538545 MBD3L2Q8NHZ7 208 aaPredicted RBP12.07□□□□□ -0.48
ACTN1-205ENST00000538545 C5orf66Q9H5L9 145 aa12.07□□□□□ -0.48
ACTN1-205ENST00000538545 NOP16Q9Y3C1 178 aaKnown RBP12.07□□□□□ -0.48
ACTN1-205ENST00000538545 CST4P01036 141 aa12.06□□□□□ -0.48
ACTN1-205ENST00000538545 PRKACAP17612 351 aa12.06□□□□□ -0.48
ACTN1-205ENST00000538545 ZNF83P51522 516 aa12.06□□□□□ -0.48
ACTN1-205ENST00000538545 FAM27E3Q08E93 113 aa12.06□□□□□ -0.48
ACTN1-205ENST00000538545 CHRFAM7AQ494W8 412 aa12.06□□□□□ -0.48
ACTN1-205ENST00000538545 LRRC37A5PQ49AS3 106 aa12.06□□□□□ -0.48
ACTN1-205ENST00000538545 PXT1Q8NFP0 134 aa12.06□□□□□ -0.48
ACTN1-205ENST00000538545 HIST1H2AAQ96QV6 131 aa12.06□□□□□ -0.48
ACTN1-205ENST00000538545 MSL2Q9HCI7 577 aa12.06□□□□□ -0.48
ACTN1-205ENST00000538545 TRAV39A0A0B4J263 110 aa12.06□□□□□ -0.48
ACTN1-205ENST00000538545 SERPINE3A8MV23 424 aa12.06□□□□□ -0.48
ACTN1-205ENST00000538545 EEF1E1-BLOC1S5C9J1V9 151 aa12.06□□□□□ -0.48
ACTN1-205ENST00000538545 HS3ST1O14792 307 aa12.06□□□□□ -0.48
ACTN1-205ENST00000538545 IL2RAP01589 272 aa12.06□□□□□ -0.48
ACTN1-205ENST00000538545 GRPP07492 148 aa12.06□□□□□ -0.48
ACTN1-205ENST00000538545 SLC9A3R2Q15599 337 aa12.06□□□□□ -0.48
ACTN1-205ENST00000538545 LGALSLQ3ZCW2 172 aaPredicted RBP12.06□□□□□ -0.48
ACTN1-205ENST00000538545 ZNF826PQ6ZT77 177 aa12.06□□□□□ -0.48
ACTN1-205ENST00000538545 TERB2Q8NHR7 220 aa12.06□□□□□ -0.48
ACTN1-205ENST00000538545 KLF14Q8TD94 323 aaPredicted RBP12.06□□□□□ -0.48
ACTN1-205ENST00000538545 PCNPQ8WW12 178 aaKnown RBP12.06□□□□□ -0.48
ACTN1-205ENST00000538545 S100PBPQ96BU1 408 aa12.06□□□□□ -0.48
ACTN1-205ENST00000538545 SLC23A1Q9UHI7 598 aa12.06□□□□□ -0.48
ACTN1-205ENST00000538545 SNRPGP15A8MWD9 76 aa12.06□□□□□ -0.48
ACTN1-205ENST00000538545 FAM25EA8MYX2 175 aa12.06□□□□□ -0.48
ACTN1-205ENST00000538545 KNG1P01042 644 aa12.06□□□□□ -0.48
ACTN1-205ENST00000538545 IGKV3-15P01624 115 aa12.06□□□□□ -0.48
ACTN1-205ENST00000538545 FCGR3AP08637 254 aa12.06□□□□□ -0.48
ACTN1-205ENST00000538545 GSTT2P0CG29 244 aa12.06□□□□□ -0.48
ACTN1-205ENST00000538545 NAT1P18440 290 aa12.06□□□□□ -0.48
ACTN1-205ENST00000538545 MSMPQ1L6U9 139 aa12.06□□□□□ -0.48
ACTN1-205ENST00000538545 OR2A2Q6IF42 318 aa12.06□□□□□ -0.48
ACTN1-205ENST00000538545 FTMTQ8N4E7 242 aa12.06□□□□□ -0.48
ACTN1-205ENST00000538545 ASCC1Q8N9N2 400 aaKnown RBP12.06□□□□□ -0.48
ACTN1-205ENST00000538545 OR5AP2Q8NGF4 316 aa12.06□□□□□ -0.48
ACTN1-205ENST00000538545 RDH5Q92781 318 aa12.06□□□□□ -0.48
ACTN1-205ENST00000538545 TMEM230Q96A57 120 aa12.06□□□□□ -0.48
ACTN1-205ENST00000538545 HYLS1Q96M11 299 aa12.06□□□□□ -0.48
ACTN1-205ENST00000538545 ASF1BQ9NVP2 202 aa12.06□□□□□ -0.48
ACTN1-205ENST00000538545 ANAPC10Q9UM13 185 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms