RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 ID4P47928 161 aa5.86□□□□□ -1.47
USP28-207ENST00000538475 UBE2NP61088 152 aaKnown RBP5.86□□□□□ -1.47
USP28-207ENST00000538475 PAFAH1B2P68402 229 aa5.86□□□□□ -1.47
USP28-207ENST00000538475 HIST1H3AP68431 136 aa5.86□□□□□ -1.47
USP28-207ENST00000538475 FOXF1Q12946 379 aa5.86□□□□□ -1.47
USP28-207ENST00000538475 RUNX2Q13950 521 aa5.86□□□□□ -1.47
USP28-207ENST00000538475 KIR2DS3Q14952 304 aa5.86□□□□□ -1.47
USP28-207ENST00000538475 SGCBQ16585 318 aa5.86□□□□□ -1.47
USP28-207ENST00000538475 COL5A1-AS1Q5SY13 56 aa5.86□□□□□ -1.47
USP28-207ENST00000538475 GFI1BQ5VTD9 330 aa5.86□□□□□ -1.47
USP28-207ENST00000538475 FBXW9Q5XUX1 488 aa5.86□□□□□ -1.47
USP28-207ENST00000538475 ZNF774Q6NX45 483 aa5.86□□□□□ -1.47
USP28-207ENST00000538475 CNKSR3Q6P9H4 555 aa5.86□□□□□ -1.47
USP28-207ENST00000538475 UNQ6494/PRO21346Q6UXR6 183 aa5.86□□□□□ -1.47
USP28-207ENST00000538475 TTLL10Q6ZVT0 673 aa5.86□□□□□ -1.47
USP28-207ENST00000538475 VN1R4Q7Z5H5 301 aa5.86□□□□□ -1.47
USP28-207ENST00000538475 LGI3Q8N145 548 aa5.86□□□□□ -1.47
USP28-207ENST00000538475 FBXL14Q8N1E6 418 aa5.86□□□□□ -1.47
USP28-207ENST00000538475 TMEM156Q8N614 296 aa5.86□□□□□ -1.47
USP28-207ENST00000538475 CCDC71LQ8N9Z2 235 aa5.86□□□□□ -1.47
USP28-207ENST00000538475 SEMA6DQ8NFY4 1073 aa5.86□□□□□ -1.47
USP28-207ENST00000538475 OR2G3Q8NGZ4 309 aa5.86□□□□□ -1.47
USP28-207ENST00000538475 CLDND2Q8NHS1 167 aa5.86□□□□□ -1.47
USP28-207ENST00000538475 ZNF519Q8TB69 540 aa5.86□□□□□ -1.47
USP28-207ENST00000538475 MBD3L1Q8WWY6 194 aa5.86□□□□□ -1.47
USP28-207ENST00000538475 ROBO4Q8WZ75 1007 aa5.86□□□□□ -1.47
USP28-207ENST00000538475 ARRDC3Q96B67 414 aa5.86□□□□□ -1.47
USP28-207ENST00000538475 BOD1Q96IK1 185 aa5.86□□□□□ -1.47
USP28-207ENST00000538475 LPAR4Q99677 370 aa5.86□□□□□ -1.47
USP28-207ENST00000538475 ABHD6Q9BV23 337 aa5.86□□□□□ -1.47
USP28-207ENST00000538475 TM2D1Q9BX74 207 aa5.86□□□□□ -1.47
USP28-207ENST00000538475 C6orf106Q9H6K1 298 aaPredicted RBP5.86□□□□□ -1.47
USP28-207ENST00000538475 PLEKHF2Q9H8W4 249 aa5.86□□□□□ -1.47
USP28-207ENST00000538475 MSL2Q9HCI7 577 aa5.86□□□□□ -1.47
USP28-207ENST00000538475 Q9N2K0 584 aa5.86□□□□□ -1.47
USP28-207ENST00000538475 PHPT1Q9NRX4 125 aaPredicted RBP5.86□□□□□ -1.47
USP28-207ENST00000538475 LYRM2Q9NU23 88 aaPredicted RBP5.86□□□□□ -1.47
USP28-207ENST00000538475 FBXO34Q9NWN3 711 aa5.86□□□□□ -1.47
USP28-207ENST00000538475 AK3Q9UIJ7 227 aa5.86□□□□□ -1.47
USP28-207ENST00000538475 ZNF346Q9UL40 294 aaKnown RBP5.86□□□□□ -1.47
USP28-207ENST00000538475 SLC22A13Q9Y226 551 aa5.86□□□□□ -1.47
USP28-207ENST00000538475 ZFP30Q9Y2G7 519 aa5.86□□□□□ -1.47
USP28-207ENST00000538475 LRP12Q9Y561 859 aa5.86□□□□□ -1.47
USP28-207ENST00000538475 ALPK2Q86TB3 2170 aa5.85□□□□□ -1.47
USP28-207ENST00000538475 TRAV9-1A0A075B6T8 112 aa5.85□□□□□ -1.47
USP28-207ENST00000538475 TRAV36DV7A0A075B6V5 113 aa5.85□□□□□ -1.47
USP28-207ENST00000538475 TRAV39A0A0B4J263 110 aa5.85□□□□□ -1.47
USP28-207ENST00000538475 A0A1B0GTH9 108 aa5.85□□□□□ -1.47
USP28-207ENST00000538475 XKRY2A2RUG3 117 aa5.85□□□□□ -1.47
USP28-207ENST00000538475 CLEC18AA5D8T8 446 aa5.85□□□□□ -1.47
USP28-207ENST00000538475 FOXI3A8MTJ6 420 aaPredicted RBP5.85□□□□□ -1.47
USP28-207ENST00000538475 K7ESM1 405 aa5.85□□□□□ -1.47
USP28-207ENST00000538475 CYR61O00622 381 aa5.85□□□□□ -1.47
USP28-207ENST00000538475 SMAD9O15198 467 aaKnown RBP5.85□□□□□ -1.47
USP28-207ENST00000538475 VENTXO95231 258 aa5.85□□□□□ -1.47
USP28-207ENST00000538475 SYNGR4O95473 234 aa5.85□□□□□ -1.47
USP28-207ENST00000538475 PGA4P0DJD7 388 aa5.85□□□□□ -1.47
USP28-207ENST00000538475 PGA5P0DJD9 388 aa5.85□□□□□ -1.47
USP28-207ENST00000538475 FGF5P12034 268 aa5.85□□□□□ -1.47
USP28-207ENST00000538475 NR2C1P13056 603 aa5.85□□□□□ -1.47
USP28-207ENST00000538475 CD99P14209 185 aa5.85□□□□□ -1.47
USP28-207ENST00000538475 ZNF823P16415 610 aa5.85□□□□□ -1.47
USP28-207ENST00000538475 GNB3P16520 340 aa5.85□□□□□ -1.47
USP28-207ENST00000538475 SERPINA2P20848 420 aa5.85□□□□□ -1.47
USP28-207ENST00000538475 DTYMKP23919 212 aa5.85□□□□□ -1.47
USP28-207ENST00000538475 CD82P27701 267 aa5.85□□□□□ -1.47
USP28-207ENST00000538475 EPHA8P29322 1005 aaPredicted RBP5.85□□□□□ -1.47
USP28-207ENST00000538475 PTGER4P35408 488 aa5.85□□□□□ -1.47
USP28-207ENST00000538475 ZNF93P35789 620 aaPredicted RBP5.85□□□□□ -1.47
USP28-207ENST00000538475 PPP1CCP36873 323 aaKnown RBP5.85□□□□□ -1.47
USP28-207ENST00000538475 POLR2HP52434 150 aaKnown RBP5.85□□□□□ -1.47
USP28-207ENST00000538475 ZNF133P52736 654 aaPredicted RBP5.85□□□□□ -1.47
USP28-207ENST00000538475 SOX8P57073 446 aa5.85□□□□□ -1.47
USP28-207ENST00000538475 KLF3P57682 345 aaPredicted RBP5.85□□□□□ -1.47
USP28-207ENST00000538475 RPL23AP62750 156 aaKnown RBP5.85□□□□□ -1.47
USP28-207ENST00000538475 CSNK2A1P68400 391 aaPredicted RBP5.85□□□□□ -1.47
USP28-207ENST00000538475 IGLV3-21P80748 117 aaPredicted RBP5.85□□□□□ -1.47
USP28-207ENST00000538475 PSG6Q00889 435 aa5.85□□□□□ -1.47
USP28-207ENST00000538475 ZP4Q12836 540 aa5.85□□□□□ -1.47
USP28-207ENST00000538475 IL24Q13007 206 aa5.85□□□□□ -1.47
USP28-207ENST00000538475 ARFRP1Q13795 201 aa5.85□□□□□ -1.47
USP28-207ENST00000538475 ELAVL3Q14576 367 aaKnown RBP5.85□□□□□ -1.47
USP28-207ENST00000538475 TMEM187Q14656 261 aa5.85□□□□□ -1.47
USP28-207ENST00000538475 SHHQ15465 462 aa5.85□□□□□ -1.47
USP28-207ENST00000538475 MLF2Q15773 248 aaPredicted RBP5.85□□□□□ -1.47
USP28-207ENST00000538475 MPV17LQ2QL34 196 aa5.85□□□□□ -1.47
USP28-207ENST00000538475 FNDC7Q5VTL7 733 aa5.85□□□□□ -1.47
USP28-207ENST00000538475 FBXO42Q6P3S6 717 aa5.85□□□□□ -1.47
USP28-207ENST00000538475 KLHL24Q6TFL4 600 aa5.85□□□□□ -1.47
USP28-207ENST00000538475 CBLN3Q6UW01 205 aa5.85□□□□□ -1.47
USP28-207ENST00000538475 TMEM25Q86YD3 366 aa5.85□□□□□ -1.47
USP28-207ENST00000538475 CLEC18CQ8NCF0 446 aa5.85□□□□□ -1.47
USP28-207ENST00000538475 CSNK2A3Q8NEV1 391 aa5.85□□□□□ -1.47
USP28-207ENST00000538475 NEK7Q8TDX7 302 aa5.85□□□□□ -1.47
USP28-207ENST00000538475 PTPMT1Q8WUK0 201 aaPredicted RBP5.85□□□□□ -1.47
USP28-207ENST00000538475 ORAOV1Q8WV07 137 aa5.85□□□□□ -1.47
USP28-207ENST00000538475 C22orf15Q8WYQ4 148 aa5.85□□□□□ -1.47
USP28-207ENST00000538475 TSLPQ969D9 159 aa5.85□□□□□ -1.47
USP28-207ENST00000538475 ERGIC1Q969X5 290 aa5.85□□□□□ -1.47
USP28-207ENST00000538475 C10orf35Q96D05 121 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms