RNA–Protein interactions for RNA: ENST00000538039.5

CLPB-209, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CLPB, Length 3,078 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-209ENST00000538039 EIF5A2Q9GZV4 153 aaKnown RBP12.23□□□□□ -0.45
CLPB-209ENST00000538039 FREM1Q5H8C1 2179 aa12.23□□□□□ -0.45
CLPB-209ENST00000538039 ZNF850A8MQ14 1090 aa12.23□□□□□ -0.45
CLPB-209ENST00000538039 M0R036 132 aa12.23□□□□□ -0.45
CLPB-209ENST00000538039 M0R135 149 aa12.23□□□□□ -0.45
CLPB-209ENST00000538039 IFNA4P05014 189 aa12.23□□□□□ -0.45
CLPB-209ENST00000538039 SPINK2P20155 84 aa12.23□□□□□ -0.45
CLPB-209ENST00000538039 MSR1P21757 451 aa12.23□□□□□ -0.45
CLPB-209ENST00000538039 SURF2Q15527 256 aaPredicted RBP12.23□□□□□ -0.45
CLPB-209ENST00000538039 NSUN5P2Q63ZY6 315 aa12.23□□□□□ -0.45
CLPB-209ENST00000538039 ZNF385CQ66K41 422 aaPredicted RBP12.23□□□□□ -0.45
CLPB-209ENST00000538039 ADAM5Q6NVV9 412 aa12.23□□□□□ -0.45
CLPB-209ENST00000538039 FADS6Q8N9I5 356 aa12.23□□□□□ -0.45
CLPB-209ENST00000538039 OR10AD1Q8NGE0 317 aa12.23□□□□□ -0.45
CLPB-209ENST00000538039 ZNF799Q96GE5 643 aa12.23□□□□□ -0.45
CLPB-209ENST00000538039 HS3ST6Q96QI5 342 aa12.23□□□□□ -0.45
CLPB-209ENST00000538039 SEBOXQ9HB31 216 aaPredicted RBP12.23□□□□□ -0.45
CLPB-209ENST00000538039 SCRG1O75711 98 aa12.22□□□□□ -0.45
CLPB-209ENST00000538039 HAGHQ16775 308 aa12.22□□□□□ -0.45
CLPB-209ENST00000538039 ODF3L1Q8IXM7 274 aa12.22□□□□□ -0.45
CLPB-209ENST00000538039 TMEM123Q8N131 208 aa12.22□□□□□ -0.45
CLPB-209ENST00000538039 ADPRHL1Q8NDY3 354 aa12.22□□□□□ -0.45
CLPB-209ENST00000538039 C18orf12Q96KH6 178 aa12.22□□□□□ -0.45
CLPB-209ENST00000538039 NELFAQ9H3P2 528 aa12.22□□□□□ -0.45
CLPB-209ENST00000538039 NIT2Q9NQR4 276 aa12.22□□□□□ -0.45
CLPB-209ENST00000538039 PLEK2Q9NYT0 353 aa12.22□□□□□ -0.45
CLPB-209ENST00000538039 PRRC2CQ9Y520 2896 aaKnown RBP12.22□□□□□ -0.45
CLPB-209ENST00000538039 A0A0U1RQV5 110 aa12.22□□□□□ -0.45
CLPB-209ENST00000538039 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.22□□□□□ -0.45
CLPB-209ENST00000538039 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.22□□□□□ -0.45
CLPB-209ENST00000538039 ZNF727A8MUV8 499 aa12.22□□□□□ -0.45
CLPB-209ENST00000538039 RRP8O43159 456 aaKnown RBP12.22□□□□□ -0.45
CLPB-209ENST00000538039 CLN5O75503 358 aa12.22□□□□□ -0.45
CLPB-209ENST00000538039 IGHV2-5P01817 119 aa12.22□□□□□ -0.45
CLPB-209ENST00000538039 RD3LP0DJH9 198 aa12.22□□□□□ -0.45
CLPB-209ENST00000538039 ZNF774Q6NX45 483 aa12.22□□□□□ -0.45
CLPB-209ENST00000538039 GUSBP11Q6P575 273 aa12.22□□□□□ -0.45
CLPB-209ENST00000538039 SUMF1Q8NBK3 374 aa12.22□□□□□ -0.45
CLPB-209ENST00000538039 SPACA9Q96E40 222 aaPredicted RBP12.22□□□□□ -0.45
CLPB-209ENST00000538039 SLC2A9Q9NRM0 540 aa12.22□□□□□ -0.45
CLPB-209ENST00000538039 TRAV20A0A0B4J274 112 aa12.22□□□□□ -0.45
CLPB-209ENST00000538039 CCDC163A0A0D9SF12 145 aa12.22□□□□□ -0.45
CLPB-209ENST00000538039 CDRT15L2A8MXV6 281 aa12.22□□□□□ -0.45
CLPB-209ENST00000538039 FABP1P07148 127 aa12.22□□□□□ -0.45
CLPB-209ENST00000538039 RAB5BP61020 215 aa12.22□□□□□ -0.45
CLPB-209ENST00000538039 HIST1H3AP68431 136 aa12.22□□□□□ -0.45
CLPB-209ENST00000538039 NCMAPQ5T1S8 102 aa12.22□□□□□ -0.45
CLPB-209ENST00000538039 HIST2H3PS2Q5TEC6 136 aa12.22□□□□□ -0.45
CLPB-209ENST00000538039 HIST2H3AQ71DI3 136 aa12.22□□□□□ -0.45
CLPB-209ENST00000538039 TMEM54Q969K7 222 aa12.22□□□□□ -0.45
CLPB-209ENST00000538039 JSRP1Q96MG2 331 aaPredicted RBP12.22□□□□□ -0.45
CLPB-209ENST00000538039 SRXN1Q9BYN0 137 aa12.22□□□□□ -0.45
CLPB-209ENST00000538039 CHRDQ9H2X0 955 aa12.22□□□□□ -0.45
CLPB-209ENST00000538039 NAA60Q9H7X0 242 aa12.22□□□□□ -0.45
CLPB-209ENST00000538039 C19orf12Q9NSK7 152 aa12.22□□□□□ -0.45
CLPB-209ENST00000538039 P4HTMQ9NXG6 502 aa12.22□□□□□ -0.45
CLPB-209ENST00000538039 HSF4Q9ULV5 492 aa12.22□□□□□ -0.45
CLPB-209ENST00000538039 IFITM10A6NMD0 228 aa12.21□□□□□ -0.45
CLPB-209ENST00000538039 C1orf196B1AJZ1 125 aa12.21□□□□□ -0.45
CLPB-209ENST00000538039 TXNL1O43396 289 aa12.21□□□□□ -0.45
CLPB-209ENST00000538039 ZIC3O60481 467 aa12.21□□□□□ -0.45
CLPB-209ENST00000538039 NXPH3O95157 252 aa12.21□□□□□ -0.45
CLPB-209ENST00000538039 CCL3P10147 92 aa12.21□□□□□ -0.45
CLPB-209ENST00000538039 RAB5AP20339 215 aa12.21□□□□□ -0.45
CLPB-209ENST00000538039 SMCO1Q147U7 214 aa12.21□□□□□ -0.45
CLPB-209ENST00000538039 IGSF11Q5DX21 431 aa12.21□□□□□ -0.45
CLPB-209ENST00000538039 ACER2Q5QJU3 275 aa12.21□□□□□ -0.45
CLPB-209ENST00000538039 WDR74Q6RFH5 385 aaPredicted RBP12.21□□□□□ -0.45
CLPB-209ENST00000538039 SLC22A25Q6T423 547 aa12.21□□□□□ -0.45
CLPB-209ENST00000538039 OPN5Q6U736 354 aa12.21□□□□□ -0.45
CLPB-209ENST00000538039 TMEM182Q6ZP80 229 aaPredicted RBP12.21□□□□□ -0.45
CLPB-209ENST00000538039 TMEM171Q8WVE6 324 aa12.21□□□□□ -0.45
CLPB-209ENST00000538039 GINS3Q9BRX5 216 aa12.21□□□□□ -0.45
CLPB-209ENST00000538039 BCL2L14Q9BZR8 327 aa12.21□□□□□ -0.45
CLPB-209ENST00000538039 CRIM1Q9NZV1 1036 aa12.21□□□□□ -0.45
CLPB-209ENST00000538039 MEMO1Q9Y316 297 aa12.21□□□□□ -0.45
CLPB-209ENST00000538039 LOC400499M0QZD8 3231 aa12.21□□□□□ -0.46
CLPB-209ENST00000538039 FAM24AA6NFZ4 105 aa12.21□□□□□ -0.46
CLPB-209ENST00000538039 UMAD1C9J7I0 102 aa12.21□□□□□ -0.46
CLPB-209ENST00000538039 ONECUT2O95948 504 aa12.21□□□□□ -0.46
CLPB-209ENST00000538039 ZNF806P0C7X5 589 aa12.21□□□□□ -0.46
CLPB-209ENST00000538039 ZNF728P0DKX0 622 aa12.21□□□□□ -0.46
CLPB-209ENST00000538039 HOXB1P14653 301 aaPredicted RBP12.21□□□□□ -0.46
CLPB-209ENST00000538039 EPHA1P21709 976 aa12.21□□□□□ -0.46
CLPB-209ENST00000538039 CHATP28329 748 aa12.21□□□□□ -0.46
CLPB-209ENST00000538039 SULT1A1P50225 295 aa12.21□□□□□ -0.46
CLPB-209ENST00000538039 LSM6P62312 80 aaKnown RBP12.21□□□□□ -0.46
CLPB-209ENST00000538039 GJC3Q8NFK1 279 aa12.21□□□□□ -0.46
CLPB-209ENST00000538039 YPEL4Q96NS1 127 aa12.21□□□□□ -0.46
CLPB-209ENST00000538039 S100A13Q99584 98 aa12.21□□□□□ -0.46
CLPB-209ENST00000538039 MTCH2Q9Y6C9 303 aa12.21□□□□□ -0.46
CLPB-209ENST00000538039 PPIHO43447 177 aaKnown RBP12.2□□□□□ -0.46
CLPB-209ENST00000538039 ZFAND5O76080 213 aa12.2□□□□□ -0.46
CLPB-209ENST00000538039 CLINT1Q14677 625 aa12.2□□□□□ -0.46
CLPB-209ENST00000538039 EIF5AL1Q6IS14 154 aaKnown RBP12.2□□□□□ -0.46
CLPB-209ENST00000538039 SLC35G3Q8N808 338 aa12.2□□□□□ -0.46
CLPB-209ENST00000538039 CD300LFQ8TDQ1 290 aa12.2□□□□□ -0.46
CLPB-209ENST00000538039 RGCCQ9H4X1 137 aa12.2□□□□□ -0.46
CLPB-209ENST00000538039 FOXD3Q9UJU5 478 aaPredicted RBP12.2□□□□□ -0.46
CLPB-209ENST00000538039 KIAA1549Q9HCM3 1950 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms