RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 RFT1Q96AA3 541 aa6.89□□□□□ -1.31
SPARC-208ENST00000538026 C8orf4Q9NR00 106 aa6.89□□□□□ -1.31
SPARC-208ENST00000538026 PLCXD1Q9NUJ7 323 aa6.89□□□□□ -1.31
SPARC-208ENST00000538026 RBFOX1Q9NWB1 397 aaKnown RBP6.89□□□□□ -1.31
SPARC-208ENST00000538026 CAB39Q9Y376 341 aaPredicted RBP6.89□□□□□ -1.31
SPARC-208ENST00000538026 HSPE1-MOB4S4R3N1 261 aa6.89□□□□□ -1.31
SPARC-208ENST00000538026 IGHV1-69DA0A0B4J2H0 117 aa6.88□□□□□ -1.31
SPARC-208ENST00000538026 TRBV2A0A0J9YWF9 115 aa6.88□□□□□ -1.31
SPARC-208ENST00000538026 A0A0U1RQK1 487 aa6.88□□□□□ -1.31
SPARC-208ENST00000538026 MEX3AA1L020 520 aaKnown RBP6.88□□□□□ -1.31
SPARC-208ENST00000538026 MEGF11A6BM72 1044 aa6.88□□□□□ -1.31
SPARC-208ENST00000538026 DNAJC9-AS1A6NH13 148 aa6.88□□□□□ -1.31
SPARC-208ENST00000538026 TMEM212A6NML5 194 aa6.88□□□□□ -1.31
SPARC-208ENST00000538026 K7N7A8 449 aa6.88□□□□□ -1.31
SPARC-208ENST00000538026 GATBO75879 557 aaKnown RBP6.88□□□□□ -1.31
SPARC-208ENST00000538026 ALX3O95076 343 aa6.88□□□□□ -1.31
SPARC-208ENST00000538026 NXPH2O95156 264 aa6.88□□□□□ -1.31
SPARC-208ENST00000538026 KNG1P01042 644 aa6.88□□□□□ -1.31
SPARC-208ENST00000538026 IGHV1-69P01742 117 aa6.88□□□□□ -1.31
SPARC-208ENST00000538026 PIPP12273 146 aaPredicted RBP6.88□□□□□ -1.31
SPARC-208ENST00000538026 FPR2P25090 351 aa6.88□□□□□ -1.31
SPARC-208ENST00000538026 RBP2P50120 134 aa6.88□□□□□ -1.31
SPARC-208ENST00000538026 GBX2P52951 348 aaPredicted RBP6.88□□□□□ -1.31
SPARC-208ENST00000538026 MTCP1P56278 107 aa6.88□□□□□ -1.31
SPARC-208ENST00000538026 COL10A1Q03692 680 aa6.88□□□□□ -1.31
SPARC-208ENST00000538026 PDZK1IP1Q13113 114 aa6.88□□□□□ -1.31
SPARC-208ENST00000538026 SLC9A3R2Q15599 337 aa6.88□□□□□ -1.31
SPARC-208ENST00000538026 LRRC10Q5BKY1 277 aa6.88□□□□□ -1.31
SPARC-208ENST00000538026 LDLRAD2Q5SZI1 272 aa6.88□□□□□ -1.31
SPARC-208ENST00000538026 TMEM200BQ69YZ2 307 aa6.88□□□□□ -1.31
SPARC-208ENST00000538026 TEX29Q8N6K0 151 aa6.88□□□□□ -1.31
SPARC-208ENST00000538026 OR4M1Q8NGD0 313 aa6.88□□□□□ -1.31
SPARC-208ENST00000538026 OR13C3Q8NGS6 347 aa6.88□□□□□ -1.31
SPARC-208ENST00000538026 OR13C9Q8NGT0 318 aa6.88□□□□□ -1.31
SPARC-208ENST00000538026 LHX4Q969G2 390 aa6.88□□□□□ -1.31
SPARC-208ENST00000538026 TMEM80Q96HE8 168 aa6.88□□□□□ -1.31
SPARC-208ENST00000538026 MED30Q96HR3 178 aa6.88□□□□□ -1.31
SPARC-208ENST00000538026 CYYR1Q96J86 154 aa6.88□□□□□ -1.31
SPARC-208ENST00000538026 PGLYRP3Q96LB9 341 aa6.88□□□□□ -1.31
SPARC-208ENST00000538026 CEP19Q96LK0 163 aa6.88□□□□□ -1.31
SPARC-208ENST00000538026 SUCNR1Q9BXA5 334 aa6.88□□□□□ -1.31
SPARC-208ENST00000538026 ZCCHC4Q9H5U6 513 aa6.88□□□□□ -1.31
SPARC-208ENST00000538026 UNKLQ9H9P5 680 aaKnown RBP6.88□□□□□ -1.31
SPARC-208ENST00000538026 PLEKHA1Q9HB21 404 aa6.88□□□□□ -1.31
SPARC-208ENST00000538026 SIRT7Q9NRC8 400 aa6.88□□□□□ -1.31
SPARC-208ENST00000538026 BABAM2Q9NXR7 383 aa6.88□□□□□ -1.31
SPARC-208ENST00000538026 ZNF581Q9P0T4 197 aa6.88□□□□□ -1.31
SPARC-208ENST00000538026 OR14J1Q9UGF5 321 aa6.88□□□□□ -1.31
SPARC-208ENST00000538026 SLC7A11Q9UPY5 501 aa6.88□□□□□ -1.31
SPARC-208ENST00000538026 KPTNQ9Y664 436 aa6.88□□□□□ -1.31
SPARC-208ENST00000538026 MEGF8Q7Z7M0 2845 aa6.87□□□□□ -1.31
SPARC-208ENST00000538026 TRBV5-5A0A0J9YX44 114 aa6.87□□□□□ -1.31
SPARC-208ENST00000538026 TMEM89A2RUT3 159 aa6.87□□□□□ -1.31
SPARC-208ENST00000538026 MAGEA13PA6NCF6 341 aa6.87□□□□□ -1.31
SPARC-208ENST00000538026 NKX6-3A6NJ46 265 aa6.87□□□□□ -1.31
SPARC-208ENST00000538026 GPR37O15354 613 aa6.87□□□□□ -1.31
SPARC-208ENST00000538026 PIN1P1O15428 100 aa6.87□□□□□ -1.31
SPARC-208ENST00000538026 PSPNO60542 156 aa6.87□□□□□ -1.31
SPARC-208ENST00000538026 KDM4BO94953 1096 aa6.87□□□□□ -1.31
SPARC-208ENST00000538026 SERPINA3P01011 423 aa6.87□□□□□ -1.31
SPARC-208ENST00000538026 TK1P04183 234 aa6.87□□□□□ -1.31
SPARC-208ENST00000538026 CCL3L1P16619 93 aa6.87□□□□□ -1.31
SPARC-208ENST00000538026 NDUFB7P17568 137 aa6.87□□□□□ -1.31
SPARC-208ENST00000538026 PRTN3P24158 256 aa6.87□□□□□ -1.31
SPARC-208ENST00000538026 PAX6P26367 422 aa6.87□□□□□ -1.31
SPARC-208ENST00000538026 SOX2P48431 317 aa6.87□□□□□ -1.31
SPARC-208ENST00000538026 GP2P55259 537 aaKnown RBP6.87□□□□□ -1.31
SPARC-208ENST00000538026 ZNF273Q14593 569 aa6.87□□□□□ -1.31
SPARC-208ENST00000538026 ZNF146Q15072 292 aa6.87□□□□□ -1.31
SPARC-208ENST00000538026 SMIM21Q3B7S5 101 aa6.87□□□□□ -1.31
SPARC-208ENST00000538026 C6orf141Q5SZD1 244 aa6.87□□□□□ -1.31
SPARC-208ENST00000538026 METTL11BQ5VVY1 283 aa6.87□□□□□ -1.31
SPARC-208ENST00000538026 Q6P435 159 aa6.87□□□□□ -1.31
SPARC-208ENST00000538026 RPL22L1Q6P5R6 122 aaKnown RBP6.87□□□□□ -1.31
SPARC-208ENST00000538026 METAP1DQ6UB28 335 aaPredicted RBP6.87□□□□□ -1.31
SPARC-208ENST00000538026 Q6YL49 198 aa6.87□□□□□ -1.31
SPARC-208ENST00000538026 C1orf122Q6ZSJ8 110 aa6.87□□□□□ -1.31
SPARC-208ENST00000538026 LYPD6Q86Y78 171 aa6.87□□□□□ -1.31
SPARC-208ENST00000538026 C8orf59Q8N0T1 100 aaPredicted RBP6.87□□□□□ -1.31
SPARC-208ENST00000538026 KIR3DL3Q8N743 410 aa6.87□□□□□ -1.31
SPARC-208ENST00000538026 TMEM185AQ8NFB2 350 aa6.87□□□□□ -1.31
SPARC-208ENST00000538026 BPIFB6Q8NFQ5 453 aa6.87□□□□□ -1.31
SPARC-208ENST00000538026 OR5D18Q8NGL1 313 aa6.87□□□□□ -1.31
SPARC-208ENST00000538026 OR52N1Q8NH53 320 aa6.87□□□□□ -1.31
SPARC-208ENST00000538026 OR5AK2Q8NH90 309 aa6.87□□□□□ -1.31
SPARC-208ENST00000538026 ZFAND2BQ8WV99 257 aa6.87□□□□□ -1.31
SPARC-208ENST00000538026 H1FXQ92522 213 aaKnown RBP6.87□□□□□ -1.31
SPARC-208ENST00000538026 GHSRQ92847 366 aa6.87□□□□□ -1.31
SPARC-208ENST00000538026 SPSB1Q96BD6 273 aa6.87□□□□□ -1.31
SPARC-208ENST00000538026 BORCS8Q96FH0 119 aa6.87□□□□□ -1.31
SPARC-208ENST00000538026 DMRTB1Q96MA1 342 aa6.87□□□□□ -1.31
SPARC-208ENST00000538026 OPALINQ96PE5 141 aa6.87□□□□□ -1.31
SPARC-208ENST00000538026 MS4A7Q9GZW8 240 aaPredicted RBP6.87□□□□□ -1.31
SPARC-208ENST00000538026 SEBOXQ9HB31 216 aaPredicted RBP6.87□□□□□ -1.31
SPARC-208ENST00000538026 HMG20AQ9NP66 347 aa6.87□□□□□ -1.31
SPARC-208ENST00000538026 TAS2R4Q9NYW5 299 aa6.87□□□□□ -1.31
SPARC-208ENST00000538026 CNOT2Q9NZN8 540 aaKnown RBP6.87□□□□□ -1.31
SPARC-208ENST00000538026 ONECUT1Q9UBC0 465 aa6.87□□□□□ -1.31
SPARC-208ENST00000538026 POLDIP2Q9Y2S7 368 aa6.87□□□□□ -1.31
SPARC-208ENST00000538026 LSM2Q9Y333 95 aaKnown RBP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms