RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 PDLIM4P50479 330 aa9.61□□□□□ -0.87
CLSTN3-207ENST00000537408 IL24Q13007 206 aa9.61□□□□□ -0.87
CLSTN3-207ENST00000537408 ZNF266Q14584 549 aa9.61□□□□□ -0.87
CLSTN3-207ENST00000537408 PLXDC2Q6UX71 529 aa9.61□□□□□ -0.87
CLSTN3-207ENST00000537408 OR5H2Q8NGV7 314 aa9.61□□□□□ -0.87
CLSTN3-207ENST00000537408 AQP3Q92482 292 aa9.61□□□□□ -0.87
CLSTN3-207ENST00000537408 TMEM14AQ9Y6G1 99 aa9.61□□□□□ -0.87
CLSTN3-207ENST00000537408 KCNE3Q9Y6H6 103 aa9.61□□□□□ -0.87
CLSTN3-207ENST00000537408 SPTA1P02549 2419 aa9.61□□□□□ -0.87
CLSTN3-207ENST00000537408 K7ESM1 405 aa9.61□□□□□ -0.87
CLSTN3-207ENST00000537408 WDR1O75083 606 aa9.61□□□□□ -0.87
CLSTN3-207ENST00000537408 MFGE8Q08431 387 aaPredicted RBP9.61□□□□□ -0.87
CLSTN3-207ENST00000537408 COL9A2Q14055 689 aaPredicted RBP9.61□□□□□ -0.87
CLSTN3-207ENST00000537408 FBLN7Q53RD9 439 aa9.61□□□□□ -0.87
CLSTN3-207ENST00000537408 SFTPA1Q8IWL2 248 aa9.61□□□□□ -0.87
CLSTN3-207ENST00000537408 LILRA3Q8N6C8 439 aaPredicted RBP9.61□□□□□ -0.87
CLSTN3-207ENST00000537408 ZG16BQ96DA0 208 aa9.61□□□□□ -0.87
CLSTN3-207ENST00000537408 PRSS27Q9BQR3 290 aa9.61□□□□□ -0.87
CLSTN3-207ENST00000537408 ALG12Q9BV10 488 aa9.61□□□□□ -0.87
CLSTN3-207ENST00000537408 TBL1XR1Q9BZK7 514 aa9.61□□□□□ -0.87
CLSTN3-207ENST00000537408 GPR35Q9HC97 309 aa9.61□□□□□ -0.87
CLSTN3-207ENST00000537408 Q9N2K0 584 aa9.61□□□□□ -0.87
CLSTN3-207ENST00000537408 ZNF320A2RRD8 509 aa9.6□□□□□ -0.87
CLSTN3-207ENST00000537408 CDC14CA4D256 554 aa9.6□□□□□ -0.87
CLSTN3-207ENST00000537408 ZNF883P0CG24 379 aa9.6□□□□□ -0.87
CLSTN3-207ENST00000537408 TMEM225BP0DP42 221 aa9.6□□□□□ -0.87
CLSTN3-207ENST00000537408 BSGP35613 385 aa9.6□□□□□ -0.87
CLSTN3-207ENST00000537408 TPPP2P59282 170 aa9.6□□□□□ -0.87
CLSTN3-207ENST00000537408 OR4C11Q6IEV9 310 aa9.6□□□□□ -0.87
CLSTN3-207ENST00000537408 ZNF740Q8NDX6 193 aa9.6□□□□□ -0.87
CLSTN3-207ENST00000537408 ZNF701Q9NV72 531 aaPredicted RBP9.6□□□□□ -0.87
CLSTN3-207ENST00000537408 BET1LQ9NYM9 111 aa9.6□□□□□ -0.87
CLSTN3-207ENST00000537408 ADAM29Q9UKF5 820 aa9.6□□□□□ -0.87
CLSTN3-207ENST00000537408 RNF150Q9ULK6 438 aa9.6□□□□□ -0.87
CLSTN3-207ENST00000537408 RNF24Q9Y225 148 aa9.6□□□□□ -0.87
CLSTN3-207ENST00000537408 ZFHX2Q9C0A1 2572 aaPredicted RBP9.6□□□□□ -0.87
CLSTN3-207ENST00000537408 A0A1B0GU03 582 aa9.6□□□□□ -0.87
CLSTN3-207ENST00000537408 HSPB2A8KAH6 182 aa9.6□□□□□ -0.87
CLSTN3-207ENST00000537408 FTH1P19P0C7X4 201 aa9.6□□□□□ -0.87
CLSTN3-207ENST00000537408 CD46P15529 392 aa9.6□□□□□ -0.87
CLSTN3-207ENST00000537408 UCNP55089 124 aa9.6□□□□□ -0.87
CLSTN3-207ENST00000537408 HSPB2Q16082 182 aa9.6□□□□□ -0.87
CLSTN3-207ENST00000537408 ANKRD55Q3KP44 614 aa9.6□□□□□ -0.87
CLSTN3-207ENST00000537408 CST9LP1Q5W188 147 aa9.6□□□□□ -0.87
CLSTN3-207ENST00000537408 ADAMTSL4Q6UY14 1074 aa9.6□□□□□ -0.87
CLSTN3-207ENST00000537408 NMNAT3Q96T66 252 aa9.6□□□□□ -0.87
CLSTN3-207ENST00000537408 ULBP3Q9BZM4 244 aa9.6□□□□□ -0.87
CLSTN3-207ENST00000537408 MRPL22Q9NWU5 206 aaKnown RBP9.6□□□□□ -0.87
CLSTN3-207ENST00000537408 FUT9Q9Y231 359 aa9.6□□□□□ -0.87
CLSTN3-207ENST00000537408 MAP1LC3B2A6NCE7 125 aa9.6□□□□□ -0.87
CLSTN3-207ENST00000537408 H7BYZ3 331 aa9.6□□□□□ -0.87
CLSTN3-207ENST00000537408 C1orf105O95561 183 aa9.6□□□□□ -0.87
CLSTN3-207ENST00000537408 CNN1P51911 297 aaKnown RBP9.6□□□□□ -0.87
CLSTN3-207ENST00000537408 FBXW12Q6X9E4 464 aa9.6□□□□□ -0.87
CLSTN3-207ENST00000537408 CMTM1Q8IZ96 169 aa9.6□□□□□ -0.87
CLSTN3-207ENST00000537408 GVQW1Q8N7I0 195 aa9.6□□□□□ -0.87
CLSTN3-207ENST00000537408 ZFP62Q8NB50 900 aaPredicted RBP9.6□□□□□ -0.87
CLSTN3-207ENST00000537408 KCNE4Q8WWG9 221 aa9.6□□□□□ -0.87
CLSTN3-207ENST00000537408 IL22RA2Q969J5 263 aa9.6□□□□□ -0.87
CLSTN3-207ENST00000537408 BTF3L4Q96K17 158 aa9.6□□□□□ -0.87
CLSTN3-207ENST00000537408 MAP1LC3BQ9GZQ8 125 aa9.6□□□□□ -0.87
CLSTN3-207ENST00000537408 PRR13Q9NZ81 148 aa9.6□□□□□ -0.87
CLSTN3-207ENST00000537408 GPR132Q9UNW8 380 aa9.6□□□□□ -0.87
CLSTN3-207ENST00000537408 KIAA1671Q9BY89 1806 aa9.6□□□□□ -0.87
CLSTN3-207ENST00000537408 PLXNA3P51805 1871 aa9.59□□□□□ -0.87
CLSTN3-207ENST00000537408 CLEC18AA5D8T8 446 aa9.59□□□□□ -0.87
CLSTN3-207ENST00000537408 K7N7A8 449 aa9.59□□□□□ -0.87
CLSTN3-207ENST00000537408 DBIP07108 87 aaKnown RBP9.59□□□□□ -0.87
CLSTN3-207ENST00000537408 LYG1Q8N1E2 194 aa9.59□□□□□ -0.87
CLSTN3-207ENST00000537408 CLEC18CQ8NCF0 446 aa9.59□□□□□ -0.87
CLSTN3-207ENST00000537408 OR4B1Q8NGF8 309 aa9.59□□□□□ -0.87
CLSTN3-207ENST00000537408 RPUSD4Q96CM3 377 aaKnown RBP9.59□□□□□ -0.87
CLSTN3-207ENST00000537408 MS4A8Q9BY19 250 aa9.59□□□□□ -0.87
CLSTN3-207ENST00000537408 MKKSQ9NPJ1 570 aaPredicted RBP9.59□□□□□ -0.87
CLSTN3-207ENST00000537408 MBNL1Q9NR56 388 aaKnown RBP9.59□□□□□ -0.87
CLSTN3-207ENST00000537408 NLRC5Q86WI3 1866 aa9.59□□□□□ -0.87
CLSTN3-207ENST00000537408 GPR18Q14330 331 aa9.59□□□□□ -0.87
CLSTN3-207ENST00000537408 TMEM176BQ3YBM2 270 aaPredicted RBP9.59□□□□□ -0.87
CLSTN3-207ENST00000537408 LINC01551Q86U37 167 aa9.59□□□□□ -0.87
CLSTN3-207ENST00000537408 DYRK2Q92630 601 aa9.59□□□□□ -0.87
CLSTN3-207ENST00000537408 ERGIC1Q969X5 290 aa9.59□□□□□ -0.87
CLSTN3-207ENST00000537408 FGGYQ96C11 551 aa9.59□□□□□ -0.87
CLSTN3-207ENST00000537408 MRM2Q9UI43 246 aaKnown RBP9.59□□□□□ -0.87
CLSTN3-207ENST00000537408 BDP1A6H8Y1 2624 aa9.59□□□□□ -0.87
CLSTN3-207ENST00000537408 TMEM150CB9EJG8 249 aa9.59□□□□□ -0.87
CLSTN3-207ENST00000537408 CSNK1A1P48729 337 aa9.59□□□□□ -0.87
CLSTN3-207ENST00000537408 METAP1P53582 386 aa9.59□□□□□ -0.87
CLSTN3-207ENST00000537408 SPOCK1Q08629 439 aa9.59□□□□□ -0.87
CLSTN3-207ENST00000537408 TCF15Q12870 199 aa9.59□□□□□ -0.87
CLSTN3-207ENST00000537408 ICAM4Q14773 271 aa9.59□□□□□ -0.87
CLSTN3-207ENST00000537408 DEFB134Q4QY38 66 aa9.59□□□□□ -0.87
CLSTN3-207ENST00000537408 HES3Q5TGS1 186 aa9.59□□□□□ -0.87
CLSTN3-207ENST00000537408 PRR27Q6MZM9 219 aa9.59□□□□□ -0.87
CLSTN3-207ENST00000537408 MCEMP1Q8IX19 187 aa9.59□□□□□ -0.87
CLSTN3-207ENST00000537408 OR10G4Q8NGN3 311 aa9.59□□□□□ -0.87
CLSTN3-207ENST00000537408 OR6N2Q8NGY6 317 aa9.59□□□□□ -0.87
CLSTN3-207ENST00000537408 PTX4Q96A99 478 aa9.59□□□□□ -0.87
CLSTN3-207ENST00000537408 SH3BGRL3Q9H299 93 aa9.59□□□□□ -0.87
CLSTN3-207ENST00000537408 AURKAIP1Q9NWT8 199 aaPredicted RBP9.59□□□□□ -0.87
CLSTN3-207ENST00000537408 SERGEFQ9UGK8 458 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms