RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 EIF2S3P41091 472 aaKnown RBP11.73□□□□□ -0.53
SMG6-203ENST00000536871 SORDQ00796 357 aa11.73□□□□□ -0.53
SMG6-203ENST00000536871 TSC22D1Q15714 1073 aa11.73□□□□□ -0.53
SMG6-203ENST00000536871 TAF9Q16594 264 aa11.73□□□□□ -0.53
SMG6-203ENST00000536871 NKAPLQ5M9Q1 402 aa11.73□□□□□ -0.53
SMG6-203ENST00000536871 C11orf87Q6NUJ2 197 aa11.73□□□□□ -0.53
SMG6-203ENST00000536871 C6orf201Q7Z4U5 140 aa11.73□□□□□ -0.53
SMG6-203ENST00000536871 ZNF546Q86UE3 836 aa11.73□□□□□ -0.53
SMG6-203ENST00000536871 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.73□□□□□ -0.53
SMG6-203ENST00000536871 OR56B2PQ8NGI1 322 aa11.73□□□□□ -0.53
SMG6-203ENST00000536871 THAP6Q8TBB0 222 aa11.73□□□□□ -0.53
SMG6-203ENST00000536871 BCL2L2Q92843 193 aaPredicted RBP11.73□□□□□ -0.53
SMG6-203ENST00000536871 SARAFQ96BY9 339 aa11.73□□□□□ -0.53
SMG6-203ENST00000536871 PAPOLGQ9BWT3 736 aaKnown RBP11.73□□□□□ -0.53
SMG6-203ENST00000536871 ARL6Q9H0F7 186 aa11.73□□□□□ -0.53
SMG6-203ENST00000536871 C5orf66Q9H5L9 145 aa11.73□□□□□ -0.53
SMG6-203ENST00000536871 SPRR3Q9UBC9 169 aa11.73□□□□□ -0.53
SMG6-203ENST00000536871 DUX4Q9UBX2 424 aa11.73□□□□□ -0.53
SMG6-203ENST00000536871 ST3GAL6Q9Y274 331 aa11.73□□□□□ -0.53
SMG6-203ENST00000536871 LIPGQ9Y5X9 500 aa11.73□□□□□ -0.53
SMG6-203ENST00000536871 hCG_1807616A0A1W2PRN6 198 aa11.72□□□□□ -0.53
SMG6-203ENST00000536871 ZNF850A8MQ14 1090 aa11.72□□□□□ -0.53
SMG6-203ENST00000536871 ABCD4O14678 606 aa11.72□□□□□ -0.53
SMG6-203ENST00000536871 ANGPTL7O43827 346 aa11.72□□□□□ -0.53
SMG6-203ENST00000536871 CEACAM1P13688 526 aa11.72□□□□□ -0.53
SMG6-203ENST00000536871 FUT3P21217 361 aa11.72□□□□□ -0.53
SMG6-203ENST00000536871 CALCRP30988 508 aa11.72□□□□□ -0.53
SMG6-203ENST00000536871 RBM11P57052 281 aaKnown RBP11.72□□□□□ -0.53
SMG6-203ENST00000536871 PRDX4Q13162 271 aa11.72□□□□□ -0.53
SMG6-203ENST00000536871 HLXQ14774 488 aaPredicted RBP11.72□□□□□ -0.53
SMG6-203ENST00000536871 MPV17LQ2QL34 196 aa11.72□□□□□ -0.53
SMG6-203ENST00000536871 ATP1A1-AS1Q5TC04 95 aa11.72□□□□□ -0.53
SMG6-203ENST00000536871 AADACL3Q5VUY0 350 aa11.72□□□□□ -0.53
SMG6-203ENST00000536871 C17orf107Q6ZR85 190 aa11.72□□□□□ -0.53
SMG6-203ENST00000536871 ZNF611Q8N823 705 aa11.72□□□□□ -0.53
SMG6-203ENST00000536871 OR13G1Q8NGZ3 307 aa11.72□□□□□ -0.53
SMG6-203ENST00000536871 ZNF286AQ9HBT8 521 aa11.72□□□□□ -0.53
SMG6-203ENST00000536871 ANKRD30BLA7E2S9 258 aa11.72□□□□□ -0.53
SMG6-203ENST00000536871 POM121CA8CG34 1229 aa11.72□□□□□ -0.53
SMG6-203ENST00000536871 NKX2-8O15522 239 aa11.72□□□□□ -0.53
SMG6-203ENST00000536871 CTSDP07339 412 aaPredicted RBP11.72□□□□□ -0.53
SMG6-203ENST00000536871 CCNOP22674 350 aa11.72□□□□□ -0.53
SMG6-203ENST00000536871 NPY4RP50391 375 aa11.72□□□□□ -0.53
SMG6-203ENST00000536871 CCL11P51671 97 aa11.72□□□□□ -0.53
SMG6-203ENST00000536871 UBA52P62987 128 aaKnown RBP11.72□□□□□ -0.53
SMG6-203ENST00000536871 TBC1D28Q2M2D7 210 aa11.72□□□□□ -0.53
SMG6-203ENST00000536871 Q6ZS49 121 aa11.72□□□□□ -0.53
SMG6-203ENST00000536871 TMPRSS7Q7RTY8 843 aa11.72□□□□□ -0.53
SMG6-203ENST00000536871 FBXL14Q8N1E6 418 aa11.72□□□□□ -0.53
SMG6-203ENST00000536871 ADAD2Q8NCV1 583 aaKnown RBP11.72□□□□□ -0.53
SMG6-203ENST00000536871 SCARB1Q8WTV0 552 aa11.72□□□□□ -0.53
SMG6-203ENST00000536871 BOD1Q96IK1 185 aa11.72□□□□□ -0.53
SMG6-203ENST00000536871 SPACA1Q9HBV2 294 aa11.72□□□□□ -0.53
SMG6-203ENST00000536871 FAM86C1Q9NVL1 165 aa11.72□□□□□ -0.53
SMG6-203ENST00000536871 CLCF1Q9UBD9 225 aa11.72□□□□□ -0.53
SMG6-203ENST00000536871 MEMO1Q9Y316 297 aa11.72□□□□□ -0.53
SMG6-203ENST00000536871 IL18BPO95998 194 aa11.71□□□□□ -0.53
SMG6-203ENST00000536871 GLAP06280 429 aa11.71□□□□□ -0.53
SMG6-203ENST00000536871 FCGR3AP08637 254 aa11.71□□□□□ -0.53
SMG6-203ENST00000536871 PET100P0DJ07 73 aa11.71□□□□□ -0.53
SMG6-203ENST00000536871 TUBG1P23258 451 aa11.71□□□□□ -0.53
SMG6-203ENST00000536871 NUP62P37198 522 aaPredicted RBP11.71□□□□□ -0.53
SMG6-203ENST00000536871 HOXA1P49639 335 aaPredicted RBP11.71□□□□□ -0.53
SMG6-203ENST00000536871 C9orf135Q5VTT2 229 aa11.71□□□□□ -0.53
SMG6-203ENST00000536871 OR2A2Q6IF42 318 aa11.71□□□□□ -0.53
SMG6-203ENST00000536871 DHRS11Q6UWP2 260 aa11.71□□□□□ -0.53
SMG6-203ENST00000536871 UNQ6126/PRO20091Q6UXV3 157 aa11.71□□□□□ -0.53
SMG6-203ENST00000536871 ACOT7LQ6ZUV0 252 aa11.71□□□□□ -0.53
SMG6-203ENST00000536871 ZNF573Q86YE8 665 aa11.71□□□□□ -0.53
SMG6-203ENST00000536871 KCNRGQ8N5I3 272 aa11.71□□□□□ -0.53
SMG6-203ENST00000536871 FDCSPQ8NFU4 85 aa11.71□□□□□ -0.53
SMG6-203ENST00000536871 OR10AD1Q8NGE0 317 aa11.71□□□□□ -0.53
SMG6-203ENST00000536871 CASTOR1Q8WTX7 329 aa11.71□□□□□ -0.53
SMG6-203ENST00000536871 PPP1R1CQ8WVI7 109 aa11.71□□□□□ -0.53
SMG6-203ENST00000536871 WDR89Q96FK6 387 aaPredicted RBP11.71□□□□□ -0.53
SMG6-203ENST00000536871 RIMS4Q9H426 269 aaPredicted RBP11.71□□□□□ -0.53
SMG6-203ENST00000536871 FN3KRPQ9HA64 309 aa11.71□□□□□ -0.53
SMG6-203ENST00000536871 TUBG2Q9NRH3 451 aa11.71□□□□□ -0.53
SMG6-203ENST00000536871 AK3Q9UIJ7 227 aa11.71□□□□□ -0.53
SMG6-203ENST00000536871 LHX6Q9UPM6 363 aa11.71□□□□□ -0.53
SMG6-203ENST00000536871 TRAV14DV4A0A0A6YYC5 116 aa11.7□□□□□ -0.54
SMG6-203ENST00000536871 IGKV1-12A0A0C4DH73 117 aa11.7□□□□□ -0.54
SMG6-203ENST00000536871 CD300LBA8K4G0 201 aa11.7□□□□□ -0.54
SMG6-203ENST00000536871 CEACAM4O75871 244 aa11.7□□□□□ -0.54
SMG6-203ENST00000536871 IGKV1D-12P01611 117 aa11.7□□□□□ -0.54
SMG6-203ENST00000536871 PGAM2P15259 253 aa11.7□□□□□ -0.54
SMG6-203ENST00000536871 UBE2NP61088 152 aaKnown RBP11.7□□□□□ -0.54
SMG6-203ENST00000536871 FGF12P61328 243 aa11.7□□□□□ -0.54
SMG6-203ENST00000536871 DMRTC1Q5HYR2 192 aa11.7□□□□□ -0.54
SMG6-203ENST00000536871 RNFT1Q5M7Z0 435 aa11.7□□□□□ -0.54
SMG6-203ENST00000536871 CLEC18BQ6UXF7 455 aa11.7□□□□□ -0.54
SMG6-203ENST00000536871 VASH2Q86V25 355 aa11.7□□□□□ -0.54
SMG6-203ENST00000536871 SGPP2Q8IWX5 399 aa11.7□□□□□ -0.54
SMG6-203ENST00000536871 INO80EQ8NBZ0 244 aaPredicted RBP11.7□□□□□ -0.54
SMG6-203ENST00000536871 C1orf162Q8NEQ5 155 aaPredicted RBP11.7□□□□□ -0.54
SMG6-203ENST00000536871 GTF3AQ92664 365 aaKnown RBP11.7□□□□□ -0.54
SMG6-203ENST00000536871 MARC2Q969Z3 335 aa11.7□□□□□ -0.54
SMG6-203ENST00000536871 WBP1Q96G27 269 aa11.7□□□□□ -0.54
SMG6-203ENST00000536871 RTBDNQ9BSG5 229 aaPredicted RBP11.7□□□□□ -0.54
SMG6-203ENST00000536871 FAAP24Q9BTP7 215 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms