RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 GPX7Q96SL4 187 aaPredicted RBP12.27□□□□□ -0.44
LIG1-203ENST00000536218 DHDHQ9UQ10 334 aa12.27□□□□□ -0.44
LIG1-203ENST00000536218 MRPS18CQ9Y3D5 142 aaKnown RBP12.27□□□□□ -0.44
LIG1-203ENST00000536218 H3BML4 177 aa12.27□□□□□ -0.45
LIG1-203ENST00000536218 SCGNO76038 276 aa12.27□□□□□ -0.45
LIG1-203ENST00000536218 BGLAPP02818 100 aa12.27□□□□□ -0.45
LIG1-203ENST00000536218 ACKR1Q16570 336 aa12.27□□□□□ -0.45
LIG1-203ENST00000536218 AADACL3Q5VUY0 350 aa12.27□□□□□ -0.45
LIG1-203ENST00000536218 C1orf140Q5VVS0 124 aa12.27□□□□□ -0.45
LIG1-203ENST00000536218 TEX38Q6PEX7 206 aa12.27□□□□□ -0.45
LIG1-203ENST00000536218 SLC35D2Q76EJ3 337 aa12.27□□□□□ -0.45
LIG1-203ENST00000536218 SLC16A9Q7RTY1 509 aa12.27□□□□□ -0.45
LIG1-203ENST00000536218 RTN4RL2Q86UN3 420 aa12.27□□□□□ -0.45
LIG1-203ENST00000536218 MRPL41Q8IXM3 137 aaKnown RBP12.27□□□□□ -0.45
LIG1-203ENST00000536218 FAAP24Q9BTP7 215 aa12.27□□□□□ -0.45
LIG1-203ENST00000536218 ELOVL1Q9BW60 279 aa12.27□□□□□ -0.45
LIG1-203ENST00000536218 ZNF700Q9H0M5 742 aa12.27□□□□□ -0.45
LIG1-203ENST00000536218 KLRF1Q9NZS2 232 aa12.27□□□□□ -0.45
LIG1-203ENST00000536218 MEMO1Q9Y316 297 aa12.27□□□□□ -0.45
LIG1-203ENST00000536218 URB1O60287 2271 aaKnown RBP12.27□□□□□ -0.45
LIG1-203ENST00000536218 DHRS7CA6NNS2 312 aa12.26□□□□□ -0.45
LIG1-203ENST00000536218 SFT2D2O95562 160 aa12.26□□□□□ -0.45
LIG1-203ENST00000536218 CNOT4O95628 575 aaKnown RBP12.26□□□□□ -0.45
LIG1-203ENST00000536218 SCGB1D1O95968 90 aa12.26□□□□□ -0.45
LIG1-203ENST00000536218 KNG1P01042 644 aa12.26□□□□□ -0.45
LIG1-203ENST00000536218 METTL15P1P0C7V9 234 aa12.26□□□□□ -0.45
LIG1-203ENST00000536218 ZNF708P17019 499 aa12.26□□□□□ -0.45
LIG1-203ENST00000536218 THBS4P35443 961 aa12.26□□□□□ -0.45
LIG1-203ENST00000536218 KIR3DL2P43630 455 aa12.26□□□□□ -0.45
LIG1-203ENST00000536218 POLR2HP52434 150 aaKnown RBP12.26□□□□□ -0.45
LIG1-203ENST00000536218 CCL20P78556 96 aa12.26□□□□□ -0.45
LIG1-203ENST00000536218 HNF4GQ14541 408 aa12.26□□□□□ -0.45
LIG1-203ENST00000536218 C1orf87Q8N0U7 546 aa12.26□□□□□ -0.45
LIG1-203ENST00000536218 CPEB3Q8NE35 698 aaKnown RBP12.26□□□□□ -0.45
LIG1-203ENST00000536218 C5orf66Q9H5L9 145 aa12.26□□□□□ -0.45
LIG1-203ENST00000536218 SIAH2O43255 324 aa12.26□□□□□ -0.45
LIG1-203ENST00000536218 AHSA1O95433 338 aa12.26□□□□□ -0.45
LIG1-203ENST00000536218 JMJD7P0C870 316 aa12.26□□□□□ -0.45
LIG1-203ENST00000536218 HLA-DOBP13765 273 aa12.26□□□□□ -0.45
LIG1-203ENST00000536218 SPEM2Q0P670 501 aa12.26□□□□□ -0.45
LIG1-203ENST00000536218 OR5I1Q13606 314 aa12.26□□□□□ -0.45
LIG1-203ENST00000536218 TRIM61Q5EBN2 209 aa12.26□□□□□ -0.45
LIG1-203ENST00000536218 TMEM225Q6GV28 225 aa12.26□□□□□ -0.45
LIG1-203ENST00000536218 ZNF283Q8N7M2 679 aa12.26□□□□□ -0.45
LIG1-203ENST00000536218 POC1AQ8NBT0 407 aa12.26□□□□□ -0.45
LIG1-203ENST00000536218 OR13D1Q8NGV5 346 aa12.26□□□□□ -0.45
LIG1-203ENST00000536218 ADGRG7Q96K78 797 aa12.26□□□□□ -0.45
LIG1-203ENST00000536218 CCNL2Q96S94 520 aaPredicted RBP12.26□□□□□ -0.45
LIG1-203ENST00000536218 OR51B6Q9H340 312 aa12.26□□□□□ -0.45
LIG1-203ENST00000536218 A0A0A6YYH2 397 aa12.26□□□□□ -0.45
LIG1-203ENST00000536218 A0A1W2PQD3 144 aa12.26□□□□□ -0.45
LIG1-203ENST00000536218 A6NJ64 397 aa12.26□□□□□ -0.45
LIG1-203ENST00000536218 SLC16A7O60669 478 aa12.26□□□□□ -0.45
LIG1-203ENST00000536218 PNLIPP16233 465 aa12.26□□□□□ -0.45
LIG1-203ENST00000536218 P4HA3Q7Z4N8 544 aa12.26□□□□□ -0.45
LIG1-203ENST00000536218 TMEM183AQ8IXX5 376 aa12.26□□□□□ -0.45
LIG1-203ENST00000536218 NFAM1Q8NET5 270 aaPredicted RBP12.26□□□□□ -0.45
LIG1-203ENST00000536218 TMEM230Q96A57 120 aa12.26□□□□□ -0.45
LIG1-203ENST00000536218 NIPSNAP3BQ9BS92 247 aa12.26□□□□□ -0.45
LIG1-203ENST00000536218 ACTR3CQ9C0K3 210 aaPredicted RBP12.26□□□□□ -0.45
LIG1-203ENST00000536218 OR2J2O76002 312 aa12.25□□□□□ -0.45
LIG1-203ENST00000536218 ABHD16AO95870 558 aa12.25□□□□□ -0.45
LIG1-203ENST00000536218 LYL1P12980 280 aa12.25□□□□□ -0.45
LIG1-203ENST00000536218 CCL4P13236 92 aa12.25□□□□□ -0.45
LIG1-203ENST00000536218 ASCL1P50553 236 aa12.25□□□□□ -0.45
LIG1-203ENST00000536218 ZNF774Q6NX45 483 aa12.25□□□□□ -0.45
LIG1-203ENST00000536218 GRINAQ7Z429 371 aa12.25□□□□□ -0.45
LIG1-203ENST00000536218 EXD3Q8N9H8 876 aa12.25□□□□□ -0.45
LIG1-203ENST00000536218 LIPHQ8WWY8 451 aa12.25□□□□□ -0.45
LIG1-203ENST00000536218 SLC25A44Q96H78 314 aaPredicted RBP12.25□□□□□ -0.45
LIG1-203ENST00000536218 C4orf45Q96LM5 186 aa12.25□□□□□ -0.45
LIG1-203ENST00000536218 ZNF385AQ96PM9 386 aaKnown RBP12.25□□□□□ -0.45
LIG1-203ENST00000536218 AMELYQ99218 206 aa12.25□□□□□ -0.45
LIG1-203ENST00000536218 BORCS7-ASMTA0A0B4J1R7 106 aa12.25□□□□□ -0.45
LIG1-203ENST00000536218 A8MVM7 634 aa12.25□□□□□ -0.45
LIG1-203ENST00000536218 ERVFC1-1P60608 527 aa12.25□□□□□ -0.45
LIG1-203ENST00000536218 MEP1BQ16820 701 aa12.25□□□□□ -0.45
LIG1-203ENST00000536218 CPEB2Q7Z5Q1 589 aaKnown RBP12.25□□□□□ -0.45
LIG1-203ENST00000536218 CYB561D1Q8N8Q1 229 aa12.25□□□□□ -0.45
LIG1-203ENST00000536218 WFIKKN1Q96NZ8 548 aa12.25□□□□□ -0.45
LIG1-203ENST00000536218 DCBLD2Q96PD2 775 aa12.25□□□□□ -0.45
LIG1-203ENST00000536218 ELOVL3Q9HB03 270 aa12.25□□□□□ -0.45
LIG1-203ENST00000536218 MYOTQ9UBF9 498 aa12.25□□□□□ -0.45
LIG1-203ENST00000536218 FOXD3Q9UJU5 478 aaPredicted RBP12.25□□□□□ -0.45
LIG1-203ENST00000536218 LIPGQ9Y5X9 500 aa12.25□□□□□ -0.45
LIG1-203ENST00000536218 CDRT15L2A8MXV6 281 aa12.24□□□□□ -0.45
LIG1-203ENST00000536218 CRTAPO75718 401 aaPredicted RBP12.24□□□□□ -0.45
LIG1-203ENST00000536218 CST2P09228 141 aa12.24□□□□□ -0.45
LIG1-203ENST00000536218 FUT3P21217 361 aa12.24□□□□□ -0.45
LIG1-203ENST00000536218 TUBG1P23258 451 aa12.24□□□□□ -0.45
LIG1-203ENST00000536218 GLRA1P23415 457 aa12.24□□□□□ -0.45
LIG1-203ENST00000536218 ALDH3B1P43353 468 aa12.24□□□□□ -0.45
LIG1-203ENST00000536218 DNASE1L1P49184 302 aa12.24□□□□□ -0.45
LIG1-203ENST00000536218 ASPHD2Q6ICH7 369 aa12.24□□□□□ -0.45
LIG1-203ENST00000536218 ZNF880Q6PDB4 577 aa12.24□□□□□ -0.45
LIG1-203ENST00000536218 TVP23CQ96ET8 276 aa12.24□□□□□ -0.45
LIG1-203ENST00000536218 PRRX2Q99811 253 aa12.24□□□□□ -0.45
LIG1-203ENST00000536218 KNTC1P50748 2209 aa12.24□□□□□ -0.45
LIG1-203ENST00000536218 RBFOX3A6NFN3 312 aa12.24□□□□□ -0.45
LIG1-203ENST00000536218 MASP2O00187 686 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 110.1 ms