RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 TMED9Q9BVK6 235 aa14.81□□□□□ -0.04
DDX55-204ENST00000536079 PPIL3Q9H2H8 161 aaKnown RBP14.81□□□□□ -0.04
DDX55-204ENST00000536079 C7orf69Q9H7B7 122 aa14.81□□□□□ -0.04
DDX55-204ENST00000536079 ACOT13Q9NPJ3 140 aa14.81□□□□□ -0.04
DDX55-204ENST00000536079 CDC42EP3Q9UKI2 254 aa14.81□□□□□ -0.04
DDX55-204ENST00000536079 GABRPO00591 440 aa14.8□□□□□ -0.04
DDX55-204ENST00000536079 SFTPBP07988 381 aa14.8□□□□□ -0.04
DDX55-204ENST00000536079 OCMP0CE72 109 aaPredicted RBP14.8□□□□□ -0.04
DDX55-204ENST00000536079 NPY4RP50391 375 aa14.8□□□□□ -0.04
DDX55-204ENST00000536079 GABARAPL2P60520 117 aa14.8□□□□□ -0.04
DDX55-204ENST00000536079 RPS25P62851 125 aaKnown RBP14.8□□□□□ -0.04
DDX55-204ENST00000536079 EMX1Q04741 257 aaPredicted RBP14.8□□□□□ -0.04
DDX55-204ENST00000536079 TPBGQ13641 420 aa14.8□□□□□ -0.04
DDX55-204ENST00000536079 SMIM21Q3B7S5 101 aa14.8□□□□□ -0.04
DDX55-204ENST00000536079 UNQ9370/PRO34162Q6UXP9 181 aa14.8□□□□□ -0.04
DDX55-204ENST00000536079 BTN2A1Q7KYR7 527 aa14.8□□□□□ -0.04
DDX55-204ENST00000536079 SATL1Q86VE3 508 aa14.8□□□□□ -0.04
DDX55-204ENST00000536079 TMEM203Q969S6 136 aa14.8□□□□□ -0.04
DDX55-204ENST00000536079 SDSLQ96GA7 329 aa14.8□□□□□ -0.04
DDX55-204ENST00000536079 NUDT16L1Q9BRJ7 211 aaKnown RBP14.8□□□□□ -0.04
DDX55-204ENST00000536079 DNTTIP1Q9H147 329 aa14.8□□□□□ -0.04
DDX55-204ENST00000536079 NOX4Q9NPH5 578 aa14.8□□□□□ -0.04
DDX55-204ENST00000536079 OR14J1Q9UGF5 321 aa14.8□□□□□ -0.04
DDX55-204ENST00000536079 BLOC1S6Q9UL45 172 aa14.8□□□□□ -0.04
DDX55-204ENST00000536079 KIR2DS1A0A191URI9 304 aa14.79□□□□□ -0.04
DDX55-204ENST00000536079 GPX5O75715 221 aa14.79□□□□□ -0.04
DDX55-204ENST00000536079 KDM4BO94953 1096 aa14.79□□□□□ -0.04
DDX55-204ENST00000536079 CD2P06729 351 aa14.79□□□□□ -0.04
DDX55-204ENST00000536079 PCMT1P22061 227 aa14.79□□□□□ -0.04
DDX55-204ENST00000536079 DUSP1P28562 367 aa14.79□□□□□ -0.04
DDX55-204ENST00000536079 TGFBR2P37173 567 aa14.79□□□□□ -0.04
DDX55-204ENST00000536079 SNU13P55769 128 aaKnown RBP14.79□□□□□ -0.04
DDX55-204ENST00000536079 TBCEQ15813 527 aaPredicted RBP14.79□□□□□ -0.04
DDX55-204ENST00000536079 ACSM3Q53FZ2 586 aa14.79□□□□□ -0.04
DDX55-204ENST00000536079 SLC36A1Q7Z2H8 476 aa14.79□□□□□ -0.04
DDX55-204ENST00000536079 NAV3Q8IVL0 2385 aa14.79□□□□□ -0.04
DDX55-204ENST00000536079 MKXQ8IYA7 352 aa14.79□□□□□ -0.04
DDX55-204ENST00000536079 SPARTQ8N0X7 666 aa14.79□□□□□ -0.04
DDX55-204ENST00000536079 EMG1Q92979 244 aaKnown RBP14.79□□□□□ -0.04
DDX55-204ENST00000536079 ISYNA1Q9NPH2 558 aa14.79□□□□□ -0.04
DDX55-204ENST00000536079 MXRA5Q9NR99 2828 aa14.79□□□□□ -0.04
DDX55-204ENST00000536079 SF3B6Q9Y3B4 125 aaKnown RBP14.79□□□□□ -0.04
DDX55-204ENST00000536079 NKX6-3A6NJ46 265 aa14.78□□□□□ -0.04
DDX55-204ENST00000536079 J3QLI3 93 aa14.78□□□□□ -0.04
DDX55-204ENST00000536079 NDUFB3O43676 98 aa14.78□□□□□ -0.04
DDX55-204ENST00000536079 SC5DO75845 299 aa14.78□□□□□ -0.04
DDX55-204ENST00000536079 KNG1P01042 644 aa14.78□□□□□ -0.04
DDX55-204ENST00000536079 FSHBP01225 129 aa14.78□□□□□ -0.04
DDX55-204ENST00000536079 ALDOBP05062 364 aa14.78□□□□□ -0.04
DDX55-204ENST00000536079 TMEM225BP0DP42 221 aa14.78□□□□□ -0.04
DDX55-204ENST00000536079 FSTP19883 344 aa14.78□□□□□ -0.04
DDX55-204ENST00000536079 OR3A4PP47883 348 aa14.78□□□□□ -0.04
DDX55-204ENST00000536079 RIPPLY3P57055 190 aa14.78□□□□□ -0.04
DDX55-204ENST00000536079 IL13RA1P78552 427 aa14.78□□□□□ -0.04
DDX55-204ENST00000536079 MLLT11Q13015 90 aaPredicted RBP14.78□□□□□ -0.04
DDX55-204ENST00000536079 SSX1Q16384 188 aa14.78□□□□□ -0.04
DDX55-204ENST00000536079 KLF17Q5JT82 389 aaPredicted RBP14.78□□□□□ -0.04
DDX55-204ENST00000536079 TMEM91Q6ZNR0 172 aa14.78□□□□□ -0.04
DDX55-204ENST00000536079 PHC2Q8IXK0 858 aa14.78□□□□□ -0.04
DDX55-204ENST00000536079 FAM58AQ8N1B3 248 aa14.78□□□□□ -0.04
DDX55-204ENST00000536079 UFD1Q92890 307 aa14.78□□□□□ -0.04
DDX55-204ENST00000536079 MGLLQ99685 303 aa14.78□□□□□ -0.04
DDX55-204ENST00000536079 NEK6Q9HC98 313 aa14.78□□□□□ -0.04
DDX55-204ENST00000536079 TMEM138Q9NPI0 162 aa14.78□□□□□ -0.04
DDX55-204ENST00000536079 SLC25A10Q9UBX3 287 aaPredicted RBP14.78□□□□□ -0.04
DDX55-204ENST00000536079 LPAR3Q9UBY5 353 aa14.78□□□□□ -0.04
DDX55-204ENST00000536079 FAM157CP0CG43 387 aa14.77□□□□□ -0.05
DDX55-204ENST00000536079 CPEP16870 476 aa14.77□□□□□ -0.05
DDX55-204ENST00000536079 SRD5A1P18405 259 aa14.77□□□□□ -0.05
DDX55-204ENST00000536079 GATA3P23771 443 aa14.77□□□□□ -0.05
DDX55-204ENST00000536079 BDKRB2P30411 391 aa14.77□□□□□ -0.05
DDX55-204ENST00000536079 PPP3R1P63098 170 aa14.77□□□□□ -0.05
DDX55-204ENST00000536079 COL10A1Q03692 680 aa14.77□□□□□ -0.05
DDX55-204ENST00000536079 GPR50Q13585 617 aa14.77□□□□□ -0.05
DDX55-204ENST00000536079 DDI2Q5TDH0 399 aa14.77□□□□□ -0.05
DDX55-204ENST00000536079 ZNF367Q7RTV3 350 aa14.77□□□□□ -0.05
DDX55-204ENST00000536079 LYPD6Q86Y78 171 aa14.77□□□□□ -0.05
DDX55-204ENST00000536079 LY6G5BQ8NDX9 201 aa14.77□□□□□ -0.05
DDX55-204ENST00000536079 OR10K1Q8NGX5 313 aa14.77□□□□□ -0.05
DDX55-204ENST00000536079 TNFAIP8L1Q8WVP5 186 aa14.77□□□□□ -0.05
DDX55-204ENST00000536079 MED30Q96HR3 178 aa14.77□□□□□ -0.05
DDX55-204ENST00000536079 YTHDF1Q9BYJ9 559 aaKnown RBP14.77□□□□□ -0.05
DDX55-204ENST00000536079 HMG20AQ9NP66 347 aa14.77□□□□□ -0.05
DDX55-204ENST00000536079 RPUSD1Q9UJJ7 312 aaKnown RBP14.77□□□□□ -0.05
DDX55-204ENST00000536079 SOX21Q9Y651 276 aaPredicted RBP14.77□□□□□ -0.05
DDX55-204ENST00000536079 AUP1Q9Y679 476 aa14.77□□□□□ -0.05
DDX55-204ENST00000536079 WNK2Q9Y3S1 2297 aa14.77□□□□□ -0.05
DDX55-204ENST00000536079 TMEM82A0PJX8 343 aa14.76□□□□□ -0.05
DDX55-204ENST00000536079 ENSAO43768 121 aaKnown RBP14.76□□□□□ -0.05
DDX55-204ENST00000536079 CDRT1O95170 752 aa14.76□□□□□ -0.05
DDX55-204ENST00000536079 MAS1P04201 325 aa14.76□□□□□ -0.05
DDX55-204ENST00000536079 NDUFB7P17568 137 aa14.76□□□□□ -0.05
DDX55-204ENST00000536079 PRKACAP17612 351 aa14.76□□□□□ -0.05
DDX55-204ENST00000536079 SRP14P37108 136 aaKnown RBP14.76□□□□□ -0.05
DDX55-204ENST00000536079 FGF12P61328 243 aa14.76□□□□□ -0.05
DDX55-204ENST00000536079 PDCD1Q15116 288 aa14.76□□□□□ -0.05
DDX55-204ENST00000536079 LRRC10Q5BKY1 277 aa14.76□□□□□ -0.05
DDX55-204ENST00000536079 CEACAM19Q7Z692 300 aa14.76□□□□□ -0.05
DDX55-204ENST00000536079 LRRTM1Q86UE6 522 aa14.76□□□□□ -0.05
DDX55-204ENST00000536079 SAXO1Q8IYX7 474 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms