RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 MRAPQ8TCY5 172 aa8.99□□□□□ -0.97
CLSTN3-206ENST00000535668 CANT1Q8WVQ1 401 aa8.99□□□□□ -0.97
CLSTN3-206ENST00000535668 CORO2AQ92828 525 aa8.99□□□□□ -0.97
CLSTN3-206ENST00000535668 R3HDM4Q96D70 268 aa8.99□□□□□ -0.97
CLSTN3-206ENST00000535668 RCC1LQ96I51 464 aaKnown RBP8.99□□□□□ -0.97
CLSTN3-206ENST00000535668 ZNF714Q96N38 554 aa8.99□□□□□ -0.97
CLSTN3-206ENST00000535668 CLN6Q9NWW5 311 aa8.99□□□□□ -0.97
CLSTN3-206ENST00000535668 TAS2R1Q9NYW7 299 aa8.99□□□□□ -0.97
CLSTN3-206ENST00000535668 MTCH1Q9NZJ7 389 aa8.99□□□□□ -0.97
CLSTN3-206ENST00000535668 HHLA2Q9UM44 414 aa8.99□□□□□ -0.97
CLSTN3-206ENST00000535668 COPS3Q9UNS2 423 aa8.99□□□□□ -0.97
CLSTN3-206ENST00000535668 SLC22A13Q9Y226 551 aa8.99□□□□□ -0.97
CLSTN3-206ENST00000535668 SESN1Q9Y6P5 492 aa8.99□□□□□ -0.97
CLSTN3-206ENST00000535668 TCRBV3S1A0A5B6 114 aa8.98□□□□□ -0.97
CLSTN3-206ENST00000535668 F2RL2O00254 374 aa8.98□□□□□ -0.97
CLSTN3-206ENST00000535668 SULT1C4O75897 302 aa8.98□□□□□ -0.97
CLSTN3-206ENST00000535668 CAPZA1P52907 286 aa8.98□□□□□ -0.97
CLSTN3-206ENST00000535668 HCCSP53701 268 aa8.98□□□□□ -0.97
CLSTN3-206ENST00000535668 CDC42P60953 191 aa8.98□□□□□ -0.97
CLSTN3-206ENST00000535668 ISL1P61371 349 aa8.98□□□□□ -0.97
CLSTN3-206ENST00000535668 MFGE8Q08431 387 aaPredicted RBP8.98□□□□□ -0.97
CLSTN3-206ENST00000535668 IL18R1Q13478 541 aa8.98□□□□□ -0.97
CLSTN3-206ENST00000535668 SSX2Q16385 188 aa8.98□□□□□ -0.97
CLSTN3-206ENST00000535668 SNAPC1Q16533 368 aa8.98□□□□□ -0.97
CLSTN3-206ENST00000535668 TCTEX1D4Q5JR98 221 aa8.98□□□□□ -0.97
CLSTN3-206ENST00000535668 SPIN3Q5JUX0 258 aa8.98□□□□□ -0.97
CLSTN3-206ENST00000535668 VAX1Q5SQQ9 334 aa8.98□□□□□ -0.97
CLSTN3-206ENST00000535668 RTN4RL2Q86UN3 420 aa8.98□□□□□ -0.97
CLSTN3-206ENST00000535668 EGFL6Q8IUX8 553 aa8.98□□□□□ -0.97
CLSTN3-206ENST00000535668 OR4P4Q8NGL7 312 aa8.98□□□□□ -0.97
CLSTN3-206ENST00000535668 AKR1E2Q96JD6 320 aa8.98□□□□□ -0.97
CLSTN3-206ENST00000535668 CEP19Q96LK0 163 aa8.98□□□□□ -0.97
CLSTN3-206ENST00000535668 ZNF488Q96MN9 340 aa8.98□□□□□ -0.97
CLSTN3-206ENST00000535668 CNN2Q99439 309 aaKnown RBP8.98□□□□□ -0.97
CLSTN3-206ENST00000535668 CHST5Q9GZS9 411 aa8.98□□□□□ -0.97
CLSTN3-206ENST00000535668 NCOR1P1Q9H4R4 102 aa8.98□□□□□ -0.97
CLSTN3-206ENST00000535668 ADGRL4Q9HBW9 690 aa8.98□□□□□ -0.97
CLSTN3-206ENST00000535668 ABCB10Q9NRK6 738 aa8.98□□□□□ -0.97
CLSTN3-206ENST00000535668 MRM2Q9UI43 246 aaKnown RBP8.98□□□□□ -0.97
CLSTN3-206ENST00000535668 OR52A1Q9UKL2 312 aa8.98□□□□□ -0.97
CLSTN3-206ENST00000535668 UBE2J1Q9Y385 318 aaPredicted RBP8.98□□□□□ -0.97
CLSTN3-206ENST00000535668 RYR3Q15413 4870 aa8.97□□□□□ -0.97
CLSTN3-206ENST00000535668 IGKV1-27A0A075B6S5 117 aa8.97□□□□□ -0.97
CLSTN3-206ENST00000535668 IGHV2-26A0A0B4J1V2 119 aa8.97□□□□□ -0.97
CLSTN3-206ENST00000535668 TMEM82A0PJX8 343 aa8.97□□□□□ -0.97
CLSTN3-206ENST00000535668 OOSP1A8MZH6 123 aa8.97□□□□□ -0.97
CLSTN3-206ENST00000535668 LOC110117498-PIK3R3F6TDL0 507 aa8.97□□□□□ -0.97
CLSTN3-206ENST00000535668 ARG1P05089 322 aa8.97□□□□□ -0.97
CLSTN3-206ENST00000535668 CSN2P05814 226 aa8.97□□□□□ -0.97
CLSTN3-206ENST00000535668 COX7A1P24310 79 aa8.97□□□□□ -0.97
CLSTN3-206ENST00000535668 PAX6P26367 422 aa8.97□□□□□ -0.97
CLSTN3-206ENST00000535668 RAB13P51153 203 aa8.97□□□□□ -0.97
CLSTN3-206ENST00000535668 FUT6P51993 359 aa8.97□□□□□ -0.97
CLSTN3-206ENST00000535668 OR12D2P58182 307 aa8.97□□□□□ -0.97
CLSTN3-206ENST00000535668 PAX5Q02548 391 aa8.97□□□□□ -0.97
CLSTN3-206ENST00000535668 COL10A1Q03692 680 aa8.97□□□□□ -0.97
CLSTN3-206ENST00000535668 TMED1Q13445 227 aa8.97□□□□□ -0.97
CLSTN3-206ENST00000535668 HABP2Q14520 560 aaPredicted RBP8.97□□□□□ -0.97
CLSTN3-206ENST00000535668 PTGES3Q15185 160 aaKnown RBP8.97□□□□□ -0.97
CLSTN3-206ENST00000535668 HEPN1Q6WQI6 88 aa8.97□□□□□ -0.97
CLSTN3-206ENST00000535668 ZNF782Q6ZMW2 699 aaPredicted RBP8.97□□□□□ -0.97
CLSTN3-206ENST00000535668 Q6ZS46 218 aa8.97□□□□□ -0.97
CLSTN3-206ENST00000535668 C11orf44Q8N8P7 122 aa8.97□□□□□ -0.97
CLSTN3-206ENST00000535668 OR5AU1Q8NGC0 362 aa8.97□□□□□ -0.97
CLSTN3-206ENST00000535668 OR4M1Q8NGD0 313 aa8.97□□□□□ -0.97
CLSTN3-206ENST00000535668 PP6455Q8WZ26 134 aa8.97□□□□□ -0.97
CLSTN3-206ENST00000535668 CREB3L1Q96BA8 519 aa8.97□□□□□ -0.97
CLSTN3-206ENST00000535668 OTULINQ96BN8 352 aa8.97□□□□□ -0.97
CLSTN3-206ENST00000535668 PRRG3Q9BZD7 231 aa8.97□□□□□ -0.97
CLSTN3-206ENST00000535668 TMEM133Q9H2Q1 129 aa8.97□□□□□ -0.97
CLSTN3-206ENST00000535668 LINC00574Q9H8X3 128 aa8.97□□□□□ -0.97
CLSTN3-206ENST00000535668 TSSC4Q9Y5U2 329 aaPredicted RBP8.97□□□□□ -0.97
CLSTN3-206ENST00000535668 TRBV2A0A0J9YWF9 115 aa8.96□□□□□ -0.98
CLSTN3-206ENST00000535668 FAM90A18PA6NE21 464 aa8.96□□□□□ -0.98
CLSTN3-206ENST00000535668 FAM90A16PA6NEW6 464 aa8.96□□□□□ -0.98
CLSTN3-206ENST00000535668 FAM90A20PA6NIJ5 464 aa8.96□□□□□ -0.98
CLSTN3-206ENST00000535668 FAM90A9PA6NNJ1 464 aa8.96□□□□□ -0.98
CLSTN3-206ENST00000535668 FAM90A12PA8MX19 464 aa8.96□□□□□ -0.98
CLSTN3-206ENST00000535668 FAM90A5PA8MXJ8 464 aa8.96□□□□□ -0.98
CLSTN3-206ENST00000535668 F8VVB4 439 aa8.96□□□□□ -0.98
CLSTN3-206ENST00000535668 F8VWA3 439 aa8.96□□□□□ -0.98
CLSTN3-206ENST00000535668 LY6LH3BQJ8 138 aa8.96□□□□□ -0.98
CLSTN3-206ENST00000535668 M0QZK8 103 aa8.96□□□□□ -0.98
CLSTN3-206ENST00000535668 MGST3O14880 152 aa8.96□□□□□ -0.98
CLSTN3-206ENST00000535668 PRKYO43930 277 aa8.96□□□□□ -0.98
CLSTN3-206ENST00000535668 GATBO75879 557 aaKnown RBP8.96□□□□□ -0.98
CLSTN3-206ENST00000535668 OR2F2O95006 317 aa8.96□□□□□ -0.98
CLSTN3-206ENST00000535668 PRB2P02812 416 aaPredicted RBP8.96□□□□□ -0.98
CLSTN3-206ENST00000535668 AMY1AP04745 511 aa8.96□□□□□ -0.98
CLSTN3-206ENST00000535668 AMY2AP04746 511 aa8.96□□□□□ -0.98
CLSTN3-206ENST00000535668 FAM90A15PP0C7V4 464 aa8.96□□□□□ -0.98
CLSTN3-206ENST00000535668 FAM90A13PP0C7W8 464 aa8.96□□□□□ -0.98
CLSTN3-206ENST00000535668 FAM90A14PP0C7W9 464 aa8.96□□□□□ -0.98
CLSTN3-206ENST00000535668 FAM90A24PP0C7X0 464 aa8.96□□□□□ -0.98
CLSTN3-206ENST00000535668 HTR1DP28221 377 aa8.96□□□□□ -0.98
CLSTN3-206ENST00000535668 VDAC2P45880 294 aaPredicted RBP8.96□□□□□ -0.98
CLSTN3-206ENST00000535668 CXCR4P61073 352 aa8.96□□□□□ -0.98
CLSTN3-206ENST00000535668 RPS7P62081 194 aaKnown RBP8.96□□□□□ -0.98
CLSTN3-206ENST00000535668 ACTA2P62736 377 aa8.96□□□□□ -0.98
CLSTN3-206ENST00000535668 ACTG2P63267 376 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms