RNA–Protein interactions for RNA: ENST00000535038.1

TNFRSF1A-206, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 578 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-206ENST00000535038 VRK1Q99986 396 aaPredicted RBP5.11□□□□□ -1.59
TNFRSF1A-206ENST00000535038 GAL3ST1Q99999 423 aa5.11□□□□□ -1.59
TNFRSF1A-206ENST00000535038 SF3B5Q9BWJ5 86 aaKnown RBP5.11□□□□□ -1.59
TNFRSF1A-206ENST00000535038 TMEM59Q9BXS4 323 aa5.11□□□□□ -1.59
TNFRSF1A-206ENST00000535038 PECRQ9BY49 303 aa5.11□□□□□ -1.59
TNFRSF1A-206ENST00000535038 SLC7A5P2Q9GIP4 190 aa5.11□□□□□ -1.59
TNFRSF1A-206ENST00000535038 RAB18Q9NP72 206 aa5.11□□□□□ -1.59
TNFRSF1A-206ENST00000535038 FARSAQ9Y285 508 aaKnown RBP5.11□□□□□ -1.59
TNFRSF1A-206ENST00000535038 TMA7Q9Y2S6 64 aaKnown RBP5.11□□□□□ -1.59
TNFRSF1A-206ENST00000535038 NOP16Q9Y3C1 178 aaKnown RBP5.11□□□□□ -1.59
TNFRSF1A-206ENST00000535038 MRPS18CQ9Y3D5 142 aaKnown RBP5.11□□□□□ -1.59
TNFRSF1A-206ENST00000535038 TRIOO75962 3097 aa5.11□□□□□ -1.59
TNFRSF1A-206ENST00000535038 A0A0J9YW62 118 aa5.1□□□□□ -1.59
TNFRSF1A-206ENST00000535038 OR5H15A6NDH6 313 aa5.1□□□□□ -1.59
TNFRSF1A-206ENST00000535038 OR6C6A6NF89 314 aa5.1□□□□□ -1.59
TNFRSF1A-206ENST00000535038 ZNF726A6NNF4 738 aa5.1□□□□□ -1.59
TNFRSF1A-206ENST00000535038 ZNF716A6NP11 495 aa5.1□□□□□ -1.59
TNFRSF1A-206ENST00000535038 SERPINE3A8MV23 424 aa5.1□□□□□ -1.59
TNFRSF1A-206ENST00000535038 MPTX1A8MV57 137 aa5.1□□□□□ -1.59
TNFRSF1A-206ENST00000535038 B4E171 279 aa5.1□□□□□ -1.59
TNFRSF1A-206ENST00000535038 PROB1E7EW31 1015 aa5.1□□□□□ -1.59
TNFRSF1A-206ENST00000535038 DNASE2O00115 360 aaPredicted RBP5.1□□□□□ -1.59
TNFRSF1A-206ENST00000535038 SMAD9O15198 467 aaKnown RBP5.1□□□□□ -1.59
TNFRSF1A-206ENST00000535038 TLX3O43711 291 aaPredicted RBP5.1□□□□□ -1.59
TNFRSF1A-206ENST00000535038 SYNGR3O43761 229 aa5.1□□□□□ -1.59
TNFRSF1A-206ENST00000535038 PMP2P02689 132 aa5.1□□□□□ -1.59
TNFRSF1A-206ENST00000535038 OPN1LWP04000 364 aa5.1□□□□□ -1.59
TNFRSF1A-206ENST00000535038 CSN2P05814 226 aa5.1□□□□□ -1.59
TNFRSF1A-206ENST00000535038 HPNP05981 417 aa5.1□□□□□ -1.59
TNFRSF1A-206ENST00000535038 DCNP07585 359 aaKnown RBP5.1□□□□□ -1.59
TNFRSF1A-206ENST00000535038 CST2P09228 141 aa5.1□□□□□ -1.59
TNFRSF1A-206ENST00000535038 FAM157CP0CG43 387 aa5.1□□□□□ -1.59
TNFRSF1A-206ENST00000535038 LIPCP11150 499 aa5.1□□□□□ -1.59
TNFRSF1A-206ENST00000535038 SLC2A1P11166 492 aa5.1□□□□□ -1.59
TNFRSF1A-206ENST00000535038 PSMB6P28072 239 aa5.1□□□□□ -1.59
TNFRSF1A-206ENST00000535038 SERPINF1P36955 418 aa5.1□□□□□ -1.59
TNFRSF1A-206ENST00000535038 DLSTP36957 453 aa5.1□□□□□ -1.59
TNFRSF1A-206ENST00000535038 TSPAN7P41732 249 aa5.1□□□□□ -1.59
TNFRSF1A-206ENST00000535038 PTGFRP43088 359 aa5.1□□□□□ -1.59
TNFRSF1A-206ENST00000535038 CYCSP99999 105 aaKnown RBP5.1□□□□□ -1.59
TNFRSF1A-206ENST00000535038 DAZAP2Q15038 168 aaPredicted RBP5.1□□□□□ -1.59
TNFRSF1A-206ENST00000535038 KISS1Q15726 138 aa5.1□□□□□ -1.59
TNFRSF1A-206ENST00000535038 SCGB2B2Q4G0G5 96 aa5.1□□□□□ -1.59
TNFRSF1A-206ENST00000535038 PAN3Q58A45 887 aaKnown RBP5.1□□□□□ -1.59
TNFRSF1A-206ENST00000535038 PRAMEF20Q5VT98 475 aa5.1□□□□□ -1.59
TNFRSF1A-206ENST00000535038 CARD17Q5XLA6 110 aa5.1□□□□□ -1.59
TNFRSF1A-206ENST00000535038 ABLIM2Q6H8Q1 611 aa5.1□□□□□ -1.59
TNFRSF1A-206ENST00000535038 LIN54Q6MZP7 749 aa5.1□□□□□ -1.59
TNFRSF1A-206ENST00000535038 PRSS54Q6PEW0 395 aa5.1□□□□□ -1.59
TNFRSF1A-206ENST00000535038 C11orf88Q6PI97 169 aa5.1□□□□□ -1.59
TNFRSF1A-206ENST00000535038 UQCC3Q6UW78 93 aa5.1□□□□□ -1.59
TNFRSF1A-206ENST00000535038 CLEC18BQ6UXF7 455 aa5.1□□□□□ -1.59
TNFRSF1A-206ENST00000535038 ZNF100Q8IYN0 542 aa5.1□□□□□ -1.59
TNFRSF1A-206ENST00000535038 KMT2EQ8IZD2 1858 aa5.1□□□□□ -1.59
TNFRSF1A-206ENST00000535038 ZNF283Q8N7M2 679 aa5.1□□□□□ -1.59
TNFRSF1A-206ENST00000535038 RELL2Q8NC24 303 aaPredicted RBP5.1□□□□□ -1.59
TNFRSF1A-206ENST00000535038 GJC3Q8NFK1 279 aa5.1□□□□□ -1.59
TNFRSF1A-206ENST00000535038 OR52H1Q8NGJ2 320 aa5.1□□□□□ -1.59
TNFRSF1A-206ENST00000535038 OR2Y1Q8NGV0 311 aa5.1□□□□□ -1.59
TNFRSF1A-206ENST00000535038 IFI44Q8TCB0 444 aa5.1□□□□□ -1.59
TNFRSF1A-206ENST00000535038 HAS2Q92819 552 aa5.1□□□□□ -1.59
TNFRSF1A-206ENST00000535038 SGK3Q96BR1 496 aa5.1□□□□□ -1.59
TNFRSF1A-206ENST00000535038 FBXO17Q96EF6 278 aa5.1□□□□□ -1.59
TNFRSF1A-206ENST00000535038 PIK3IP1Q96FE7 263 aa5.1□□□□□ -1.59
TNFRSF1A-206ENST00000535038 SEC22AQ96IW7 307 aa5.1□□□□□ -1.59
TNFRSF1A-206ENST00000535038 FAM71F1Q96KD3 344 aaPredicted RBP5.1□□□□□ -1.59
TNFRSF1A-206ENST00000535038 ZNF75AQ96N20 296 aa5.1□□□□□ -1.59
TNFRSF1A-206ENST00000535038 SPACA5Q96QH8 159 aa5.1□□□□□ -1.59
TNFRSF1A-206ENST00000535038 NAA11Q9BSU3 229 aaPredicted RBP5.1□□□□□ -1.59
TNFRSF1A-206ENST00000535038 URM1Q9BTM9 101 aaKnown RBP5.1□□□□□ -1.59
TNFRSF1A-206ENST00000535038 SRXN1Q9BYN0 137 aa5.1□□□□□ -1.59
TNFRSF1A-206ENST00000535038 BANF2Q9H503 90 aa5.1□□□□□ -1.59
TNFRSF1A-206ENST00000535038 IFT46Q9NQC8 304 aa5.1□□□□□ -1.59
TNFRSF1A-206ENST00000535038 MBD2Q9UBB5 411 aa5.1□□□□□ -1.59
TNFRSF1A-206ENST00000535038 HSF4Q9ULV5 492 aa5.1□□□□□ -1.59
TNFRSF1A-206ENST00000535038 SPEF1Q9Y4P9 236 aa5.1□□□□□ -1.59
TNFRSF1A-206ENST00000535038 SDK2Q58EX2 2172 aa5.09□□□□□ -1.59
TNFRSF1A-206ENST00000535038 DOCK10Q96BY6 2186 aa5.09□□□□□ -1.59
TNFRSF1A-206ENST00000535038 TNRC6AQ8NDV7 1962 aaKnown RBP5.09□□□□□ -1.59
TNFRSF1A-206ENST00000535038 USP34Q70CQ2 3546 aa5.09□□□□□ -1.59
TNFRSF1A-206ENST00000535038 IGKV1D-8A0A087WSZ0 117 aa5.09□□□□□ -1.59
TNFRSF1A-206ENST00000535038 KANTRA0A1W2PQU2 76 aa5.09□□□□□ -1.59
TNFRSF1A-206ENST00000535038 RAB19A4D1S5 217 aa5.09□□□□□ -1.59
TNFRSF1A-206ENST00000535038 LGALS8O00214 317 aa5.09□□□□□ -1.59
TNFRSF1A-206ENST00000535038 CBR3O75828 277 aa5.09□□□□□ -1.59
TNFRSF1A-206ENST00000535038 IGHEP01854 428 aa5.09□□□□□ -1.59
TNFRSF1A-206ENST00000535038 APOC1P02654 83 aa5.09□□□□□ -1.59
TNFRSF1A-206ENST00000535038 CCL4P13236 92 aa5.09□□□□□ -1.59
TNFRSF1A-206ENST00000535038 CNR1P21554 472 aa5.09□□□□□ -1.59
TNFRSF1A-206ENST00000535038 ACKR3P25106 362 aa5.09□□□□□ -1.59
TNFRSF1A-206ENST00000535038 SRD5A2P31213 254 aa5.09□□□□□ -1.59
TNFRSF1A-206ENST00000535038 SFTPDP35247 375 aa5.09□□□□□ -1.59
TNFRSF1A-206ENST00000535038 PTGER4P35408 488 aa5.09□□□□□ -1.59
TNFRSF1A-206ENST00000535038 PMELP40967 661 aa5.09□□□□□ -1.59
TNFRSF1A-206ENST00000535038 DHPSP49366 369 aaPredicted RBP5.09□□□□□ -1.59
TNFRSF1A-206ENST00000535038 SSR4P51571 173 aa5.09□□□□□ -1.59
TNFRSF1A-206ENST00000535038 LUMP51884 338 aaPredicted RBP5.09□□□□□ -1.59
TNFRSF1A-206ENST00000535038 CLDN15P56746 228 aa5.09□□□□□ -1.59
TNFRSF1A-206ENST00000535038 TAS2R46P59540 309 aa5.09□□□□□ -1.59
TNFRSF1A-206ENST00000535038 CSNK2A1P68400 391 aaPredicted RBP5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms