RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 SLC35E4Q6ICL7 350 aa8.16□□□□□ -1.1
CLSTN3-203ENST00000534830 OR4M1Q8NGD0 313 aa8.16□□□□□ -1.1
CLSTN3-203ENST00000534830 PPP1R35Q8TAP8 253 aa8.16□□□□□ -1.1
CLSTN3-203ENST00000534830 TRUB1Q8WWH5 349 aaKnown RBP8.16□□□□□ -1.1
CLSTN3-203ENST00000534830 SSX3Q99909 188 aa8.16□□□□□ -1.1
CLSTN3-203ENST00000534830 CHST5Q9GZS9 411 aa8.16□□□□□ -1.1
CLSTN3-203ENST00000534830 BIRC6Q9NR09 4857 aa8.15□□□□□ -1.1
CLSTN3-203ENST00000534830 IGKV1-9A0A0C4DH69 117 aa8.15□□□□□ -1.1
CLSTN3-203ENST00000534830 A0A1W2PPH5 198 aa8.15□□□□□ -1.1
CLSTN3-203ENST00000534830 VGLL3A8MV65 326 aa8.15□□□□□ -1.1
CLSTN3-203ENST00000534830 H3BUX3 64 aa8.15□□□□□ -1.1
CLSTN3-203ENST00000534830 ANGPTL7O43827 346 aa8.15□□□□□ -1.1
CLSTN3-203ENST00000534830 APOL3O95236 402 aa8.15□□□□□ -1.1
CLSTN3-203ENST00000534830 MPIG6BO95866 241 aa8.15□□□□□ -1.1
CLSTN3-203ENST00000534830 PAHP00439 452 aa8.15□□□□□ -1.1
CLSTN3-203ENST00000534830 CHRM2P08172 466 aa8.15□□□□□ -1.1
CLSTN3-203ENST00000534830 KIR3DL2P43630 455 aa8.15□□□□□ -1.1
CLSTN3-203ENST00000534830 KIR2DS4P43632 304 aa8.15□□□□□ -1.1
CLSTN3-203ENST00000534830 BMXP51813 675 aa8.15□□□□□ -1.1
CLSTN3-203ENST00000534830 FUT6P51993 359 aa8.15□□□□□ -1.1
CLSTN3-203ENST00000534830 CAPZA1P52907 286 aa8.15□□□□□ -1.1
CLSTN3-203ENST00000534830 COL10A1Q03692 680 aa8.15□□□□□ -1.1
CLSTN3-203ENST00000534830 ODF4Q2M2E3 257 aa8.15□□□□□ -1.1
CLSTN3-203ENST00000534830 FDX2Q6P4F2 183 aa8.15□□□□□ -1.1
CLSTN3-203ENST00000534830 TCF23Q7RTU1 214 aa8.15□□□□□ -1.1
CLSTN3-203ENST00000534830 BATF2Q8N1L9 274 aa8.15□□□□□ -1.1
CLSTN3-203ENST00000534830 OR10H4Q8NGA5 316 aa8.15□□□□□ -1.1
CLSTN3-203ENST00000534830 TRMT10AQ8TBZ6 339 aaKnown RBP8.15□□□□□ -1.1
CLSTN3-203ENST00000534830 HRASLS5Q96KN8 279 aa8.15□□□□□ -1.1
CLSTN3-203ENST00000534830 RIBC2Q9H4K1 309 aa8.15□□□□□ -1.1
CLSTN3-203ENST00000534830 HEXA-AS1Q9H8Q6 139 aa8.15□□□□□ -1.1
CLSTN3-203ENST00000534830 USE1Q9NZ43 259 aa8.15□□□□□ -1.1
CLSTN3-203ENST00000534830 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.15□□□□□ -1.1
CLSTN3-203ENST00000534830 SLC7A11Q9UPY5 501 aa8.15□□□□□ -1.1
CLSTN3-203ENST00000534830 FAM230AA0A1W2PPH8 454 aa8.14□□□□□ -1.11
CLSTN3-203ENST00000534830 SAC3D1A6NKF1 404 aa8.14□□□□□ -1.11
CLSTN3-203ENST00000534830 ODF3BA8MYP8 253 aa8.14□□□□□ -1.11
CLSTN3-203ENST00000534830 H3BNX3 289 aa8.14□□□□□ -1.11
CLSTN3-203ENST00000534830 RBP4P02753 201 aa8.14□□□□□ -1.11
CLSTN3-203ENST00000534830 ISG15P05161 165 aa8.14□□□□□ -1.11
CLSTN3-203ENST00000534830 ALPLP05186 524 aa8.14□□□□□ -1.11
CLSTN3-203ENST00000534830 PAX6P26367 422 aa8.14□□□□□ -1.11
CLSTN3-203ENST00000534830 EFNB2P52799 333 aa8.14□□□□□ -1.11
CLSTN3-203ENST00000534830 CDC42P60953 191 aa8.14□□□□□ -1.11
CLSTN3-203ENST00000534830 SNRPGP62308 76 aaKnown RBP8.14□□□□□ -1.11
CLSTN3-203ENST00000534830 LRRC75BQ2VPJ9 315 aa8.14□□□□□ -1.11
CLSTN3-203ENST00000534830 LDLRAD2Q5SZI1 272 aa8.14□□□□□ -1.11
CLSTN3-203ENST00000534830 Q6ZTK2 550 aa8.14□□□□□ -1.11
CLSTN3-203ENST00000534830 UTS2BQ765I0 119 aa8.14□□□□□ -1.11
CLSTN3-203ENST00000534830 KCTD20Q7Z5Y7 419 aa8.14□□□□□ -1.11
CLSTN3-203ENST00000534830 RDH10Q8IZV5 341 aa8.14□□□□□ -1.11
CLSTN3-203ENST00000534830 DYNAPQ8N1N2 210 aa8.14□□□□□ -1.11
CLSTN3-203ENST00000534830 DNAAF1Q8NEP3 725 aa8.14□□□□□ -1.11
CLSTN3-203ENST00000534830 OR2G2Q8NGZ5 317 aa8.14□□□□□ -1.11
CLSTN3-203ENST00000534830 RFKQ969G6 155 aa8.14□□□□□ -1.11
CLSTN3-203ENST00000534830 ADAT3Q96EY9 351 aaPredicted RBP8.14□□□□□ -1.11
CLSTN3-203ENST00000534830 SNX22Q96L94 193 aa8.14□□□□□ -1.11
CLSTN3-203ENST00000534830 CEP19Q96LK0 163 aa8.14□□□□□ -1.11
CLSTN3-203ENST00000534830 KRTAP17-1Q9BYP8 105 aa8.14□□□□□ -1.11
CLSTN3-203ENST00000534830 PPA2Q9H2U2 334 aa8.14□□□□□ -1.11
CLSTN3-203ENST00000534830 FRRS1LQ9P0K9 344 aa8.14□□□□□ -1.11
CLSTN3-203ENST00000534830 OR14J1Q9UGF5 321 aa8.14□□□□□ -1.11
CLSTN3-203ENST00000534830 EPPK1P58107 5090 aaKnown RBP8.13□□□□□ -1.11
CLSTN3-203ENST00000534830 LOC107986453A0A1B0GWG9 222 aa8.13□□□□□ -1.11
CLSTN3-203ENST00000534830 hCG_1809904A0A1W2PP81 198 aa8.13□□□□□ -1.11
CLSTN3-203ENST00000534830 A0A1W2PPE2 198 aa8.13□□□□□ -1.11
CLSTN3-203ENST00000534830 A0A1W2PR64 198 aa8.13□□□□□ -1.11
CLSTN3-203ENST00000534830 A0A1W2PRV1 198 aa8.13□□□□□ -1.11
CLSTN3-203ENST00000534830 TMEM82A0PJX8 343 aa8.13□□□□□ -1.11
CLSTN3-203ENST00000534830 H3BSH0 61 aa8.13□□□□□ -1.11
CLSTN3-203ENST00000534830 ENTPD6O75354 484 aa8.13□□□□□ -1.11
CLSTN3-203ENST00000534830 GATBO75879 557 aaKnown RBP8.13□□□□□ -1.11
CLSTN3-203ENST00000534830 UBCP0CG48 685 aaKnown RBP8.13□□□□□ -1.11
CLSTN3-203ENST00000534830 ZNF728P0DKX0 622 aa8.13□□□□□ -1.11
CLSTN3-203ENST00000534830 GABRB1P18505 474 aa8.13□□□□□ -1.11
CLSTN3-203ENST00000534830 NPBWR2P48146 333 aa8.13□□□□□ -1.11
CLSTN3-203ENST00000534830 NANOS3P60323 173 aaKnown RBP8.13□□□□□ -1.11
CLSTN3-203ENST00000534830 ZNF91Q05481 1191 aa8.13□□□□□ -1.11
CLSTN3-203ENST00000534830 MEF2CQ06413 473 aaPredicted RBP8.13□□□□□ -1.11
CLSTN3-203ENST00000534830 ZNF146Q15072 292 aa8.13□□□□□ -1.11
CLSTN3-203ENST00000534830 TP53I3Q53FA7 332 aa8.13□□□□□ -1.11
CLSTN3-203ENST00000534830 TMEM244Q5VVB8 128 aa8.13□□□□□ -1.11
CLSTN3-203ENST00000534830 ZNF626Q68DY1 528 aa8.13□□□□□ -1.11
CLSTN3-203ENST00000534830 LIAT1Q6ZQX7 453 aa8.13□□□□□ -1.11
CLSTN3-203ENST00000534830 SLC25A26Q70HW3 274 aa8.13□□□□□ -1.11
CLSTN3-203ENST00000534830 LHFPL4Q7Z7J7 247 aa8.13□□□□□ -1.11
CLSTN3-203ENST00000534830 OR8H2Q8N162 312 aa8.13□□□□□ -1.11
CLSTN3-203ENST00000534830 C11orf44Q8N8P7 122 aa8.13□□□□□ -1.11
CLSTN3-203ENST00000534830 OR11H6Q8NGC7 330 aa8.13□□□□□ -1.11
CLSTN3-203ENST00000534830 PYDC1Q8WXC3 89 aa8.13□□□□□ -1.11
CLSTN3-203ENST00000534830 PP6455Q8WZ26 134 aa8.13□□□□□ -1.11
CLSTN3-203ENST00000534830 CFHR4Q92496 578 aa8.13□□□□□ -1.11
CLSTN3-203ENST00000534830 SLAMF9Q96A28 289 aa8.13□□□□□ -1.11
CLSTN3-203ENST00000534830 PHF21AQ96BD5 680 aa8.13□□□□□ -1.11
CLSTN3-203ENST00000534830 BORCS8Q96FH0 119 aa8.13□□□□□ -1.11
CLSTN3-203ENST00000534830 MBOAT4Q96T53 435 aa8.13□□□□□ -1.11
CLSTN3-203ENST00000534830 ZNF649Q9BS31 505 aa8.13□□□□□ -1.11
CLSTN3-203ENST00000534830 RANBP3Q9H6Z4 567 aaPredicted RBP8.13□□□□□ -1.11
CLSTN3-203ENST00000534830 PLEKHA1Q9HB21 404 aa8.13□□□□□ -1.11
CLSTN3-203ENST00000534830 IL36RNQ9UBH0 155 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms