RNA–Protein interactions for RNA: ENST00000534532.6

NCAPD3-213, Transcript of non-SMC condensin II complex subunit D3, human

TSL 2

Gene NCAPD3, Length 5,539 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAPD3-213	ENST00000534532	SCARB1	Q8WTV0	552 aa		13.9	□□□□□ -0.18
NCAPD3-213	ENST00000534532	OR2D2	Q9H210	308 aa		13.9	□□□□□ -0.18
NCAPD3-213	ENST00000534532	NTN4	Q9HB63	628 aa		13.9	□□□□□ -0.18
NCAPD3-213	ENST00000534532	GZMH	P20718	246 aa		13.9	□□□□□ -0.18
NCAPD3-213	ENST00000534532	FPR2	P25090	351 aa		13.9	□□□□□ -0.18
NCAPD3-213	ENST00000534532	P2RX3	P56373	397 aa		13.9	□□□□□ -0.18
NCAPD3-213	ENST00000534532	CDH26	Q8IXH8	852 aa		13.9	□□□□□ -0.18
NCAPD3-213	ENST00000534532	DRAXIN	Q8NBI3	349 aa	Predicted RBP	13.9	□□□□□ -0.18
NCAPD3-213	ENST00000534532	ZNF485	Q8NCK3	441 aa		13.9	□□□□□ -0.18
NCAPD3-213	ENST00000534532	SLC25A40	Q8TBP6	338 aa		13.9	□□□□□ -0.18
NCAPD3-213	ENST00000534532	ST8SIA2	Q92186	375 aa		13.9	□□□□□ -0.18
NCAPD3-213	ENST00000534532	RHNO1	Q9BSD3	238 aa		13.9	□□□□□ -0.18
NCAPD3-213	ENST00000534532	PARP12	Q9H0J9	701 aa	Known RBP	13.9	□□□□□ -0.18
NCAPD3-213	ENST00000534532	FLRT3	Q9NZU0	649 aa		13.9	□□□□□ -0.18
NCAPD3-213	ENST00000534532	OR13C7	P0DN81	318 aa		13.89	□□□□□ -0.19
NCAPD3-213	ENST00000534532	COL19A1	Q14993	1142 aa		13.89	□□□□□ -0.19
NCAPD3-213	ENST00000534532	RSPO4	Q2I0M5	234 aa	Predicted RBP	13.89	□□□□□ -0.19
NCAPD3-213	ENST00000534532	MUC20	Q8N307	709 aa	Predicted RBP	13.89	□□□□□ -0.19
NCAPD3-213	ENST00000534532	OR52L2P	Q8NGH6	319 aa		13.89	□□□□□ -0.19
NCAPD3-213	ENST00000534532	TREM2	Q9NZC2	230 aa		13.89	□□□□□ -0.19
NCAPD3-213	ENST00000534532	EXOG	Q9Y2C4	368 aa	Known RBP	13.89	□□□□□ -0.19
NCAPD3-213	ENST00000534532	CDIPT	O14735	213 aa		13.89	□□□□□ -0.19
NCAPD3-213	ENST00000534532	KLRB1	Q12918	225 aa		13.89	□□□□□ -0.19
NCAPD3-213	ENST00000534532	MS4A7	Q9GZW8	240 aa	Predicted RBP	13.89	□□□□□ -0.19
NCAPD3-213	ENST00000534532	LPAR3	Q9UBY5	353 aa		13.89	□□□□□ -0.19
NCAPD3-213	ENST00000534532	NEU3	Q9UQ49	428 aa		13.89	□□□□□ -0.19
NCAPD3-213	ENST00000534532	SERTM2	A0A1B0GWG4	89 aa		13.89	□□□□□ -0.19
NCAPD3-213	ENST00000534532	GAL	P22466	123 aa		13.89	□□□□□ -0.19
NCAPD3-213	ENST00000534532	CNN1	P51911	297 aa	Known RBP	13.89	□□□□□ -0.19
NCAPD3-213	ENST00000534532	TGIF1	Q15583	401 aa		13.89	□□□□□ -0.19
NCAPD3-213	ENST00000534532	ASXL3	Q9C0F0	2248 aa		13.89	□□□□□ -0.19
NCAPD3-213	ENST00000534532		A0A1B0GUH1	482 aa		13.89	□□□□□ -0.19
NCAPD3-213	ENST00000534532	M6PR	P20645	277 aa		13.89	□□□□□ -0.19
NCAPD3-213	ENST00000534532	HIST2H3A	Q71DI3	136 aa		13.89	□□□□□ -0.19
NCAPD3-213	ENST00000534532	OR4S2	Q8NH73	311 aa		13.89	□□□□□ -0.19
NCAPD3-213	ENST00000534532	HGD	Q93099	445 aa		13.89	□□□□□ -0.19
NCAPD3-213	ENST00000534532	ADAMTS7	Q9UKP4	1686 aa		13.89	□□□□□ -0.19
NCAPD3-213	ENST00000534532	LALBA	P00709	142 aa		13.89	□□□□□ -0.19
NCAPD3-213	ENST00000534532	TRAPPC2	P0DI81	140 aa		13.89	□□□□□ -0.19
NCAPD3-213	ENST00000534532	TRAPPC2B	P0DI82	140 aa		13.89	□□□□□ -0.19
NCAPD3-213	ENST00000534532	LIMK1	P53667	647 aa		13.89	□□□□□ -0.19
NCAPD3-213	ENST00000534532	ETFDH	Q16134	617 aa		13.89	□□□□□ -0.19
NCAPD3-213	ENST00000534532	TOR2A	Q5JU69	321 aa		13.89	□□□□□ -0.19
NCAPD3-213	ENST00000534532	ZNF787	Q6DD87	383 aa		13.89	□□□□□ -0.19
NCAPD3-213	ENST00000534532	RPL7L1	Q6DKI1	246 aa	Known RBP	13.89	□□□□□ -0.19
NCAPD3-213	ENST00000534532	ZNF574	Q6ZN55	896 aa	Predicted RBP	13.89	□□□□□ -0.19
NCAPD3-213	ENST00000534532	C6orf201	Q7Z4U5	140 aa		13.89	□□□□□ -0.19
NCAPD3-213	ENST00000534532	SLC35D1	Q9NTN3	355 aa		13.89	□□□□□ -0.19
NCAPD3-213	ENST00000534532	RCL1	Q9Y2P8	373 aa	Known RBP	13.89	□□□□□ -0.19
NCAPD3-213	ENST00000534532		H7BYZ3	331 aa		13.88	□□□□□ -0.19
NCAPD3-213	ENST00000534532		J3QT63	122 aa		13.88	□□□□□ -0.19
NCAPD3-213	ENST00000534532	SCAND1	P57086	179 aa		13.88	□□□□□ -0.19
NCAPD3-213	ENST00000534532	PMP22	Q01453	160 aa		13.88	□□□□□ -0.19
NCAPD3-213	ENST00000534532	TMEM210	A6NLX4	147 aa		13.88	□□□□□ -0.19
NCAPD3-213	ENST00000534532	NUPL2	O15504	423 aa	Known RBP	13.88	□□□□□ -0.19
NCAPD3-213	ENST00000534532	HAND1	O96004	215 aa		13.88	□□□□□ -0.19
NCAPD3-213	ENST00000534532	PGA3	P0DJD8	388 aa		13.88	□□□□□ -0.19
NCAPD3-213	ENST00000534532	TNXA	Q16473	311 aa		13.88	□□□□□ -0.19
NCAPD3-213	ENST00000534532	BTNL8	Q6UX41	500 aa		13.88	□□□□□ -0.19
NCAPD3-213	ENST00000534532	PRR19	A6NJB7	356 aa		13.88	□□□□□ -0.19
NCAPD3-213	ENST00000534532	CDC42EP2	O14613	210 aa		13.88	□□□□□ -0.19
NCAPD3-213	ENST00000534532	NME2P1	O60361	137 aa		13.88	□□□□□ -0.19
NCAPD3-213	ENST00000534532	SLC25A4	P12235	298 aa		13.88	□□□□□ -0.19
NCAPD3-213	ENST00000534532	RAB5C	P51148	216 aa		13.88	□□□□□ -0.19
NCAPD3-213	ENST00000534532	MMP15	P51511	669 aa		13.88	□□□□□ -0.19
NCAPD3-213	ENST00000534532	YIPF6	Q96EC8	236 aa		13.88	□□□□□ -0.19
NCAPD3-213	ENST00000534532	MAP6	Q96JE9	813 aa		13.88	□□□□□ -0.19
NCAPD3-213	ENST00000534532	KLK11	Q9UBX7	282 aa		13.88	□□□□□ -0.19
NCAPD3-213	ENST00000534532	TMED3	Q9Y3Q3	217 aa		13.88	□□□□□ -0.19
NCAPD3-213	ENST00000534532	OOEP	A6NGQ2	149 aa		13.88	□□□□□ -0.19
NCAPD3-213	ENST00000534532	ACSM4	P0C7M7	580 aa		13.88	□□□□□ -0.19
NCAPD3-213	ENST00000534532	ZNF883	P0CG24	379 aa		13.88	□□□□□ -0.19
NCAPD3-213	ENST00000534532	CEACAM1	P13688	526 aa		13.88	□□□□□ -0.19
NCAPD3-213	ENST00000534532	GUCA2A	Q02747	115 aa		13.88	□□□□□ -0.19
NCAPD3-213	ENST00000534532	MEST	Q5EB52	335 aa		13.88	□□□□□ -0.19
NCAPD3-213	ENST00000534532	MDP1	Q86V88	176 aa		13.88	□□□□□ -0.19
NCAPD3-213	ENST00000534532	LPAR2	Q9HBW0	351 aa		13.88	□□□□□ -0.19
NCAPD3-213	ENST00000534532	KPTN	Q9Y664	436 aa		13.88	□□□□□ -0.19
NCAPD3-213	ENST00000534532		K7ESF4	209 aa		13.87	□□□□□ -0.19
NCAPD3-213	ENST00000534532	PHYHD1	Q5SRE7	291 aa		13.87	□□□□□ -0.19
NCAPD3-213	ENST00000534532	ASB13	Q8WXK3	278 aa		13.87	□□□□□ -0.19
NCAPD3-213	ENST00000534532	TMEFF2	Q9UIK5	374 aa	Predicted RBP	13.87	□□□□□ -0.19
NCAPD3-213	ENST00000534532	FER1L6	Q2WGJ9	1857 aa		13.87	□□□□□ -0.19
NCAPD3-213	ENST00000534532	PPIAL4E	A0A075B759	164 aa		13.87	□□□□□ -0.19
NCAPD3-213	ENST00000534532	TMEM272	A0A1B0GTI8	110 aa		13.87	□□□□□ -0.19
NCAPD3-213	ENST00000534532	PPIAL4D	F5H284	164 aa		13.87	□□□□□ -0.19
NCAPD3-213	ENST00000534532		H3BP45	60 aa		13.87	□□□□□ -0.19
NCAPD3-213	ENST00000534532	PPIAL4F	P0DN26	164 aa		13.87	□□□□□ -0.19
NCAPD3-213	ENST00000534532	BATF	Q16520	125 aa		13.87	□□□□□ -0.19
NCAPD3-213	ENST00000534532	CCDC144NL	Q6NUI1	221 aa		13.87	□□□□□ -0.19
NCAPD3-213	ENST00000534532	TVP23C	Q96ET8	276 aa		13.87	□□□□□ -0.19
NCAPD3-213	ENST00000534532	TCEAL7	Q9BRU2	100 aa		13.87	□□□□□ -0.19
NCAPD3-213	ENST00000534532	PPIAL4A	Q9Y536	164 aa		13.87	□□□□□ -0.19
NCAPD3-213	ENST00000534532	POLR2A	P24928	1970 aa	Known RBP	13.87	□□□□□ -0.19
NCAPD3-213	ENST00000534532	GABRB1	P18505	474 aa		13.87	□□□□□ -0.19
NCAPD3-213	ENST00000534532	CTSS	P25774	331 aa		13.87	□□□□□ -0.19
NCAPD3-213	ENST00000534532	TMEM123	Q8N131	208 aa		13.87	□□□□□ -0.19
NCAPD3-213	ENST00000534532	ANGPTL4	Q9BY76	406 aa		13.87	□□□□□ -0.19
NCAPD3-213	ENST00000534532	COA4	Q9NYJ1	87 aa		13.87	□□□□□ -0.19
NCAPD3-213	ENST00000534532	MARF1	Q9Y4F3	1742 aa	Known RBP	13.87	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms