RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 UQCC2Q9BRT2 126 aa14.61□□□□□ -0.07
NXF1-216ENST00000533499 CCDC160A6NGH7 325 aa14.6□□□□□ -0.07
NXF1-216ENST00000533499 RFPL4AA6NLU0 287 aa14.6□□□□□ -0.07
NXF1-216ENST00000533499 RFPL4AL1F8VTS6 287 aa14.6□□□□□ -0.07
NXF1-216ENST00000533499 NOL3O60936 208 aaKnown RBP14.6□□□□□ -0.07
NXF1-216ENST00000533499 NOS1APO75052 506 aaPredicted RBP14.6□□□□□ -0.07
NXF1-216ENST00000533499 KDM4BO94953 1096 aa14.6□□□□□ -0.07
NXF1-216ENST00000533499 SERPINB10P48595 397 aa14.6□□□□□ -0.07
NXF1-216ENST00000533499 MTNR1BP49286 362 aa14.6□□□□□ -0.07
NXF1-216ENST00000533499 PSMD7P51665 324 aa14.6□□□□□ -0.07
NXF1-216ENST00000533499 CAPZA1P52907 286 aa14.6□□□□□ -0.07
NXF1-216ENST00000533499 CAV3P56539 151 aa14.6□□□□□ -0.07
NXF1-216ENST00000533499 CLDN12P56749 244 aa14.6□□□□□ -0.07
NXF1-216ENST00000533499 VBP1P61758 197 aa14.6□□□□□ -0.07
NXF1-216ENST00000533499 NCS1P62166 190 aa14.6□□□□□ -0.07
NXF1-216ENST00000533499 TEX36Q5VZQ5 186 aa14.6□□□□□ -0.07
NXF1-216ENST00000533499 DCDC5Q6ZRR9 648 aa14.6□□□□□ -0.07
NXF1-216ENST00000533499 CIARTQ8N365 385 aaPredicted RBP14.6□□□□□ -0.07
NXF1-216ENST00000533499 PXT1Q8NFP0 134 aa14.6□□□□□ -0.07
NXF1-216ENST00000533499 OR6M1Q8NGM8 313 aa14.6□□□□□ -0.07
NXF1-216ENST00000533499 RAB39BQ96DA2 213 aa14.6□□□□□ -0.07
NXF1-216ENST00000533499 IL36RNQ9UBH0 155 aa14.6□□□□□ -0.07
NXF1-216ENST00000533499 TMPRSS2O15393 492 aa14.59□□□□□ -0.07
NXF1-216ENST00000533499 CRTAPO75718 401 aaPredicted RBP14.59□□□□□ -0.07
NXF1-216ENST00000533499 PSG2P11465 335 aa14.59□□□□□ -0.07
NXF1-216ENST00000533499 IL2RGP31785 369 aa14.59□□□□□ -0.07
NXF1-216ENST00000533499 ERVK11-1P61568 191 aa14.59□□□□□ -0.07
NXF1-216ENST00000533499 IKZF1Q13422 519 aa14.59□□□□□ -0.07
NXF1-216ENST00000533499 NLRC3Q7RTR2 1065 aa14.59□□□□□ -0.07
NXF1-216ENST00000533499 ANKRD13BQ86YJ7 626 aa14.59□□□□□ -0.07
NXF1-216ENST00000533499 OR8B3Q8NGG8 313 aa14.59□□□□□ -0.07
NXF1-216ENST00000533499 FAM46BQ96A09 425 aa14.59□□□□□ -0.07
NXF1-216ENST00000533499 OR8B2Q96RD0 313 aa14.59□□□□□ -0.07
NXF1-216ENST00000533499 KCNK15Q9H427 330 aa14.59□□□□□ -0.07
NXF1-216ENST00000533499 ZNF665Q9H7R5 613 aa14.59□□□□□ -0.07
NXF1-216ENST00000533499 LPAR2Q9HBW0 351 aa14.59□□□□□ -0.07
NXF1-216ENST00000533499 PCDHB16Q9NRJ7 776 aa14.59□□□□□ -0.07
NXF1-216ENST00000533499 MIOXQ9UGB7 285 aa14.59□□□□□ -0.07
NXF1-216ENST00000533499 GLS2Q9UI32 602 aa14.59□□□□□ -0.07
NXF1-216ENST00000533499 MED13LQ71F56 2210 aa14.59□□□□□ -0.07
NXF1-216ENST00000533499 A0A1W2PP11 408 aa14.58□□□□□ -0.08
NXF1-216ENST00000533499 NDUFA2O43678 99 aa14.58□□□□□ -0.08
NXF1-216ENST00000533499 ACAA1P09110 424 aaPredicted RBP14.58□□□□□ -0.08
NXF1-216ENST00000533499 PRDX2P32119 198 aa14.58□□□□□ -0.08
NXF1-216ENST00000533499 LOXL1Q08397 574 aaPredicted RBP14.58□□□□□ -0.08
NXF1-216ENST00000533499 PDCD1Q15116 288 aa14.58□□□□□ -0.08
NXF1-216ENST00000533499 C1orf100Q5SVJ3 147 aa14.58□□□□□ -0.08
NXF1-216ENST00000533499 STUMQ69YW2 141 aa14.58□□□□□ -0.08
NXF1-216ENST00000533499 SLC36A1Q7Z2H8 476 aa14.58□□□□□ -0.08
NXF1-216ENST00000533499 TPRA1Q86W33 373 aa14.58□□□□□ -0.08
NXF1-216ENST00000533499 FAM216BQ8N7L0 139 aa14.58□□□□□ -0.08
NXF1-216ENST00000533499 TMEM185AQ8NFB2 350 aa14.58□□□□□ -0.08
NXF1-216ENST00000533499 C12orf43Q96C57 262 aaKnown RBP14.58□□□□□ -0.08
NXF1-216ENST00000533499 NEIL1Q96FI4 390 aaPredicted RBP14.58□□□□□ -0.08
NXF1-216ENST00000533499 BANF2Q9H503 90 aa14.58□□□□□ -0.08
NXF1-216ENST00000533499 PATZ1Q9HBE1 687 aaKnown RBP14.58□□□□□ -0.08
NXF1-216ENST00000533499 HES4Q9HCC6 221 aa14.58□□□□□ -0.08
NXF1-216ENST00000533499 HMG20AQ9NP66 347 aa14.58□□□□□ -0.08
NXF1-216ENST00000533499 IGKV1D-17A0A075B6S4 117 aa14.57□□□□□ -0.08
NXF1-216ENST00000533499 A0A1B0GW55 424 aa14.57□□□□□ -0.08
NXF1-216ENST00000533499 SIRPB1O00241 398 aa14.57□□□□□ -0.08
NXF1-216ENST00000533499 SLC17A2O00624 439 aa14.57□□□□□ -0.08
NXF1-216ENST00000533499 ZNF780AO75290 641 aaPredicted RBP14.57□□□□□ -0.08
NXF1-216ENST00000533499 MPIG6BO95866 241 aa14.57□□□□□ -0.08
NXF1-216ENST00000533499 HAND1O96004 215 aa14.57□□□□□ -0.08
NXF1-216ENST00000533499 KNG1P01042 644 aa14.57□□□□□ -0.08
NXF1-216ENST00000533499 IGHV2-5P01817 119 aa14.57□□□□□ -0.08
NXF1-216ENST00000533499 DUX4L2P0CJ85 424 aa14.57□□□□□ -0.08
NXF1-216ENST00000533499 DUX4L3P0CJ86 424 aa14.57□□□□□ -0.08
NXF1-216ENST00000533499 DUX4L4P0CJ87 422 aa14.57□□□□□ -0.08
NXF1-216ENST00000533499 DUX4L5P0CJ88 424 aa14.57□□□□□ -0.08
NXF1-216ENST00000533499 DUX4L6P0CJ89 424 aa14.57□□□□□ -0.08
NXF1-216ENST00000533499 DUX4L7P0CJ90 424 aa14.57□□□□□ -0.08
NXF1-216ENST00000533499 SLC2A2P11168 524 aaPredicted RBP14.57□□□□□ -0.08
NXF1-216ENST00000533499 PITPNBP48739 271 aa14.57□□□□□ -0.08
NXF1-216ENST00000533499 LMO4P61968 165 aa14.57□□□□□ -0.08
NXF1-216ENST00000533499 GPR176Q14439 515 aa14.57□□□□□ -0.08
NXF1-216ENST00000533499 DGUOKQ16854 277 aa14.57□□□□□ -0.08
NXF1-216ENST00000533499 ESCO2Q56NI9 601 aa14.57□□□□□ -0.08
NXF1-216ENST00000533499 OR10K2Q6IF99 312 aa14.57□□□□□ -0.08
NXF1-216ENST00000533499 DUX4L9Q6RFH8 374 aaPredicted RBP14.57□□□□□ -0.08
NXF1-216ENST00000533499 METAP1DQ6UB28 335 aaPredicted RBP14.57□□□□□ -0.08
NXF1-216ENST00000533499 SLC16A12Q6ZSM3 486 aa14.57□□□□□ -0.08
NXF1-216ENST00000533499 OSR2Q8N2R0 312 aa14.57□□□□□ -0.08
NXF1-216ENST00000533499 CD177Q8N6Q3 437 aa14.57□□□□□ -0.08
NXF1-216ENST00000533499 ASCC1Q8N9N2 400 aaKnown RBP14.57□□□□□ -0.08
NXF1-216ENST00000533499 ANGPTL6Q8NI99 470 aa14.57□□□□□ -0.08
NXF1-216ENST00000533499 TBC1D15Q8TC07 691 aa14.57□□□□□ -0.08
NXF1-216ENST00000533499 ST8SIA4Q92187 359 aa14.57□□□□□ -0.08
NXF1-216ENST00000533499 CST11Q9H112 138 aa14.57□□□□□ -0.08
NXF1-216ENST00000533499 DUX4Q9UBX2 424 aa14.57□□□□□ -0.08
NXF1-216ENST00000533499 DAPK2Q9UIK4 370 aa14.57□□□□□ -0.08
NXF1-216ENST00000533499 CR1P17927 2039 aa14.56□□□□□ -0.08
NXF1-216ENST00000533499 FLNAP21333 2647 aaKnown RBP14.56□□□□□ -0.08
NXF1-216ENST00000533499 A0A0B4J203 849 aa14.56□□□□□ -0.08
NXF1-216ENST00000533499 IFITM5A6NNB3 132 aa14.56□□□□□ -0.08
NXF1-216ENST00000533499 NOTOA8MTQ0 251 aa14.56□□□□□ -0.08
NXF1-216ENST00000533499 SLC22A1O15245 554 aa14.56□□□□□ -0.08
NXF1-216ENST00000533499 NDUFB3O43676 98 aa14.56□□□□□ -0.08
NXF1-216ENST00000533499 GABARAPO95166 117 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms