RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 KIR3DL2P43630 455 aa12.58□□□□□ -0.4
CPSF1-211ENST00000533492 RBP2P50120 134 aa12.58□□□□□ -0.4
CPSF1-211ENST00000533492 EDDM3BP56851 147 aa12.58□□□□□ -0.4
CPSF1-211ENST00000533492 PROK1P58294 105 aa12.58□□□□□ -0.4
CPSF1-211ENST00000533492 ISL1P61371 349 aa12.58□□□□□ -0.4
CPSF1-211ENST00000533492 SNRPGP62308 76 aaKnown RBP12.58□□□□□ -0.4
CPSF1-211ENST00000533492 ZNF273Q14593 569 aa12.58□□□□□ -0.4
CPSF1-211ENST00000533492 SLC25A30Q5SVS4 291 aa12.58□□□□□ -0.4
CPSF1-211ENST00000533492 C11orf42Q8N5U0 333 aa12.58□□□□□ -0.4
CPSF1-211ENST00000533492 OR2G2Q8NGZ5 317 aa12.58□□□□□ -0.4
CPSF1-211ENST00000533492 C17orf50Q8WW18 174 aa12.58□□□□□ -0.4
CPSF1-211ENST00000533492 EMG1Q92979 244 aaKnown RBP12.58□□□□□ -0.4
CPSF1-211ENST00000533492 MEGF9Q9H1U4 602 aa12.58□□□□□ -0.4
CPSF1-211ENST00000533492 TCF7L1Q9HCS4 588 aa12.58□□□□□ -0.4
CPSF1-211ENST00000533492 F8VVB4 439 aa12.57□□□□□ -0.4
CPSF1-211ENST00000533492 F8VWA3 439 aa12.57□□□□□ -0.4
CPSF1-211ENST00000533492 SLC16A6O15403 523 aa12.57□□□□□ -0.4
CPSF1-211ENST00000533492 WIPF1O43516 503 aa12.57□□□□□ -0.4
CPSF1-211ENST00000533492 HTR1AP08908 422 aa12.57□□□□□ -0.4
CPSF1-211ENST00000533492 MTCP1P56278 107 aa12.57□□□□□ -0.4
CPSF1-211ENST00000533492 OR12D2P58182 307 aa12.57□□□□□ -0.4
CPSF1-211ENST00000533492 KRTAP10-3P60369 221 aa12.57□□□□□ -0.4
CPSF1-211ENST00000533492 LY6EQ16553 131 aa12.57□□□□□ -0.4
CPSF1-211ENST00000533492 OCLNQ16625 522 aa12.57□□□□□ -0.4
CPSF1-211ENST00000533492 LRRC75BQ2VPJ9 315 aa12.57□□□□□ -0.4
CPSF1-211ENST00000533492 SLC35E4Q6ICL7 350 aa12.57□□□□□ -0.4
CPSF1-211ENST00000533492 ZNF782Q6ZMW2 699 aaPredicted RBP12.57□□□□□ -0.4
CPSF1-211ENST00000533492 Q8IYB0 196 aa12.57□□□□□ -0.4
CPSF1-211ENST00000533492 CBR4Q8N4T8 237 aa12.57□□□□□ -0.4
CPSF1-211ENST00000533492 ACBD7Q8N6N7 88 aa12.57□□□□□ -0.4
CPSF1-211ENST00000533492 DNAAF1Q8NEP3 725 aa12.57□□□□□ -0.4
CPSF1-211ENST00000533492 FGGYQ96C11 551 aa12.57□□□□□ -0.4
CPSF1-211ENST00000533492 MRPL48Q96GC5 212 aaKnown RBP12.57□□□□□ -0.4
CPSF1-211ENST00000533492 SNX22Q96L94 193 aa12.57□□□□□ -0.4
CPSF1-211ENST00000533492 MYCBPQ99417 103 aaPredicted RBP12.57□□□□□ -0.4
CPSF1-211ENST00000533492 FRRS1LQ9P0K9 344 aa12.57□□□□□ -0.4
CPSF1-211ENST00000533492 GMPPBQ9Y5P6 360 aa12.57□□□□□ -0.4
CPSF1-211ENST00000533492 C17orf98A8MV24 154 aa12.56□□□□□ -0.4
CPSF1-211ENST00000533492 H3BNX3 289 aa12.56□□□□□ -0.4
CPSF1-211ENST00000533492 J3QLW9 94 aa12.56□□□□□ -0.4
CPSF1-211ENST00000533492 ISG15P05161 165 aa12.56□□□□□ -0.4
CPSF1-211ENST00000533492 ZNF728P0DKX0 622 aa12.56□□□□□ -0.4
CPSF1-211ENST00000533492 ZNF19P17023 458 aa12.56□□□□□ -0.4
CPSF1-211ENST00000533492 ATF1P18846 271 aa12.56□□□□□ -0.4
CPSF1-211ENST00000533492 PRKACBP22694 351 aa12.56□□□□□ -0.4
CPSF1-211ENST00000533492 POU3F4P49335 361 aa12.56□□□□□ -0.4
CPSF1-211ENST00000533492 BMXP51813 675 aa12.56□□□□□ -0.4
CPSF1-211ENST00000533492 AANATQ16613 207 aa12.56□□□□□ -0.4
CPSF1-211ENST00000533492 ENTHD1Q8IYW4 607 aa12.56□□□□□ -0.4
CPSF1-211ENST00000533492 OR8H2Q8N162 312 aa12.56□□□□□ -0.4
CPSF1-211ENST00000533492 OR13D1Q8NGV5 346 aa12.56□□□□□ -0.4
CPSF1-211ENST00000533492 ADAT3Q96EY9 351 aaPredicted RBP12.56□□□□□ -0.4
CPSF1-211ENST00000533492 RAB18Q9NP72 206 aa12.56□□□□□ -0.4
CPSF1-211ENST00000533492 GLS2Q9UI32 602 aa12.56□□□□□ -0.4
CPSF1-211ENST00000533492 HHLA2Q9UM44 414 aa12.56□□□□□ -0.4
CPSF1-211ENST00000533492 MEX3AA1L020 520 aaKnown RBP12.55□□□□□ -0.4
CPSF1-211ENST00000533492 J3QRE1 110 aa12.55□□□□□ -0.4
CPSF1-211ENST00000533492 ZNF737O75373 536 aa12.55□□□□□ -0.4
CPSF1-211ENST00000533492 HAND1O96004 215 aa12.55□□□□□ -0.4
CPSF1-211ENST00000533492 GABRR1P24046 479 aa12.55□□□□□ -0.4
CPSF1-211ENST00000533492 AZGP1P25311 298 aaKnown RBP12.55□□□□□ -0.4
CPSF1-211ENST00000533492 PAX6P26367 422 aa12.55□□□□□ -0.4
CPSF1-211ENST00000533492 PEX2P28328 305 aa12.55□□□□□ -0.4
CPSF1-211ENST00000533492 GABRA5P31644 462 aa12.55□□□□□ -0.4
CPSF1-211ENST00000533492 CCR9P51686 369 aa12.55□□□□□ -0.4
CPSF1-211ENST00000533492 ACTA2P62736 377 aa12.55□□□□□ -0.4
CPSF1-211ENST00000533492 ACTG2P63267 376 aa12.55□□□□□ -0.4
CPSF1-211ENST00000533492 EDDM3AQ14507 147 aa12.55□□□□□ -0.4
CPSF1-211ENST00000533492 ASPHD2Q6ICH7 369 aa12.55□□□□□ -0.4
CPSF1-211ENST00000533492 FDX2Q6P4F2 183 aa12.55□□□□□ -0.4
CPSF1-211ENST00000533492 LHFPL2Q6ZUX7 228 aa12.55□□□□□ -0.4
CPSF1-211ENST00000533492 UTS2BQ765I0 119 aa12.55□□□□□ -0.4
CPSF1-211ENST00000533492 FAM58AQ8N1B3 248 aa12.55□□□□□ -0.4
CPSF1-211ENST00000533492 ZNF676Q8N7Q3 588 aa12.55□□□□□ -0.4
CPSF1-211ENST00000533492 PPP1R35Q8TAP8 253 aa12.55□□□□□ -0.4
CPSF1-211ENST00000533492 RNF166Q96A37 237 aaPredicted RBP12.55□□□□□ -0.4
CPSF1-211ENST00000533492 AJUBAQ96IF1 538 aa12.55□□□□□ -0.4
CPSF1-211ENST00000533492 Q96MT0 163 aa12.55□□□□□ -0.4
CPSF1-211ENST00000533492 C9orf16Q9BUW7 83 aa12.55□□□□□ -0.4
CPSF1-211ENST00000533492 NEK6Q9HC98 313 aa12.55□□□□□ -0.4
CPSF1-211ENST00000533492 AASSQ9UDR5 926 aa12.55□□□□□ -0.4
CPSF1-211ENST00000533492 EXOGQ9Y2C4 368 aaKnown RBP12.55□□□□□ -0.4
CPSF1-211ENST00000533492 IGKV1-9A0A0C4DH69 117 aa12.54□□□□□ -0.4
CPSF1-211ENST00000533492 hADV38S2A0JD32 116 aa12.54□□□□□ -0.4
CPSF1-211ENST00000533492 TMEM82A0PJX8 343 aa12.54□□□□□ -0.4
CPSF1-211ENST00000533492 MPZL2O60487 215 aa12.54□□□□□ -0.4
CPSF1-211ENST00000533492 ARG1P05089 322 aa12.54□□□□□ -0.4
CPSF1-211ENST00000533492 PRKACAP17612 351 aa12.54□□□□□ -0.4
CPSF1-211ENST00000533492 BCL3P20749 454 aa12.54□□□□□ -0.4
CPSF1-211ENST00000533492 DUSP1P28562 367 aa12.54□□□□□ -0.4
CPSF1-211ENST00000533492 NPBWR2P48146 333 aa12.54□□□□□ -0.4
CPSF1-211ENST00000533492 NANOS3P60323 173 aaKnown RBP12.54□□□□□ -0.4
CPSF1-211ENST00000533492 MEF2CQ06413 473 aaPredicted RBP12.54□□□□□ -0.4
CPSF1-211ENST00000533492 GRK1Q15835 563 aa12.54□□□□□ -0.4
CPSF1-211ENST00000533492 LHFPL3Q86UP9 236 aa12.54□□□□□ -0.4
CPSF1-211ENST00000533492 DTX3Q8N9I9 347 aa12.54□□□□□ -0.4
CPSF1-211ENST00000533492 OR4C13Q8NGP0 309 aa12.54□□□□□ -0.4
CPSF1-211ENST00000533492 OR13C3Q8NGS6 347 aa12.54□□□□□ -0.4
CPSF1-211ENST00000533492 SPSB1Q96BD6 273 aa12.54□□□□□ -0.4
CPSF1-211ENST00000533492 LGALS12Q96DT0 336 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms