RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 LRRC18Q8N456 261 aa14.46□□□□□ -0.1
CTSB-228ENST00000533455 GNRHR2Q96P88 292 aa14.46□□□□□ -0.1
CTSB-228ENST00000533455 ZNF385AQ96PM9 386 aaKnown RBP14.46□□□□□ -0.1
CTSB-228ENST00000533455 SLC35B3Q9H1N7 401 aa14.46□□□□□ -0.1
CTSB-228ENST00000533455 SLC2A9Q9NRM0 540 aa14.46□□□□□ -0.1
CTSB-228ENST00000533455 C19orf25Q9UFG5 118 aaPredicted RBP14.46□□□□□ -0.1
CTSB-228ENST00000533455 FOXD3Q9UJU5 478 aaPredicted RBP14.46□□□□□ -0.1
CTSB-228ENST00000533455 NSG1A0A0A6YYJ2 146 aa14.45□□□□□ -0.1
CTSB-228ENST00000533455 TNRC18O15417 2968 aaPredicted RBP14.45□□□□□ -0.1
CTSB-228ENST00000533455 ST8SIA3O43173 380 aa14.45□□□□□ -0.1
CTSB-228ENST00000533455 XRCC2O43543 280 aa14.45□□□□□ -0.1
CTSB-228ENST00000533455 EIF1BO60739 113 aaKnown RBP14.45□□□□□ -0.1
CTSB-228ENST00000533455 FABP1P07148 127 aa14.45□□□□□ -0.1
CTSB-228ENST00000533455 ZNF14P17017 642 aaPredicted RBP14.45□□□□□ -0.1
CTSB-228ENST00000533455 OPRM1P35372 400 aa14.45□□□□□ -0.1
CTSB-228ENST00000533455 LURAP1LQ8IV03 231 aa14.45□□□□□ -0.1
CTSB-228ENST00000533455 TCEAL3Q969E4 200 aa14.45□□□□□ -0.1
CTSB-228ENST00000533455 ISOC2Q96AB3 205 aa14.45□□□□□ -0.1
CTSB-228ENST00000533455 INTS12Q96CB8 462 aaKnown RBP14.45□□□□□ -0.1
CTSB-228ENST00000533455 MARS2Q96GW9 593 aaKnown RBP14.45□□□□□ -0.1
CTSB-228ENST00000533455 OR6C1Q96RD1 312 aa14.45□□□□□ -0.1
CTSB-228ENST00000533455 DEFB126Q9BYW3 111 aa14.45□□□□□ -0.1
CTSB-228ENST00000533455 SMDT1Q9H4I9 107 aa14.45□□□□□ -0.1
CTSB-228ENST00000533455 PLEK2Q9NYT0 353 aa14.45□□□□□ -0.1
CTSB-228ENST00000533455 NXT1Q9UKK6 140 aaKnown RBP14.45□□□□□ -0.1
CTSB-228ENST00000533455 ABCA7Q8IZY2 2146 aa14.45□□□□□ -0.1
CTSB-228ENST00000533455 IGKV1-27A0A075B6S5 117 aa14.44□□□□□ -0.1
CTSB-228ENST00000533455 K7N7A8 449 aa14.44□□□□□ -0.1
CTSB-228ENST00000533455 TP53I11O14683 189 aa14.44□□□□□ -0.1
CTSB-228ENST00000533455 ANGPTL7O43827 346 aa14.44□□□□□ -0.1
CTSB-228ENST00000533455 ZNF806P0C7X5 589 aa14.44□□□□□ -0.1
CTSB-228ENST00000533455 CBR1P16152 277 aa14.44□□□□□ -0.1
CTSB-228ENST00000533455 FHITP49789 147 aa14.44□□□□□ -0.1
CTSB-228ENST00000533455 SULT1A1P50225 295 aa14.44□□□□□ -0.1
CTSB-228ENST00000533455 FABP9Q0Z7S8 132 aa14.44□□□□□ -0.1
CTSB-228ENST00000533455 KRBOX4Q5JUW0 171 aa14.44□□□□□ -0.1
CTSB-228ENST00000533455 FBXW12Q6X9E4 464 aa14.44□□□□□ -0.1
CTSB-228ENST00000533455 OR52M1Q8NGK5 317 aa14.44□□□□□ -0.1
CTSB-228ENST00000533455 MOB3AQ96BX8 217 aa14.44□□□□□ -0.1
CTSB-228ENST00000533455 NTNG2Q96CW9 530 aa14.44□□□□□ -0.1
CTSB-228ENST00000533455 FBXO17Q96EF6 278 aa14.44□□□□□ -0.1
CTSB-228ENST00000533455 SH3BGRL3Q9H299 93 aa14.44□□□□□ -0.1
CTSB-228ENST00000533455 ZNF581Q9P0T4 197 aa14.44□□□□□ -0.1
CTSB-228ENST00000533455 RCL1Q9Y2P8 373 aaKnown RBP14.44□□□□□ -0.1
CTSB-228ENST00000533455 LINC00587B1AMM8 73 aa14.44□□□□□ -0.1
CTSB-228ENST00000533455 NPIPA2E9PIF3 369 aa14.44□□□□□ -0.1
CTSB-228ENST00000533455 NPIPA3F8WFD2 350 aa14.44□□□□□ -0.1
CTSB-228ENST00000533455 SPRY1O43609 319 aaPredicted RBP14.44□□□□□ -0.1
CTSB-228ENST00000533455 PRH1P02810 166 aa14.44□□□□□ -0.1
CTSB-228ENST00000533455 SRFP11831 508 aa14.44□□□□□ -0.1
CTSB-228ENST00000533455 MRPS34P82930 218 aaKnown RBP14.44□□□□□ -0.1
CTSB-228ENST00000533455 RAB35Q15286 201 aa14.44□□□□□ -0.1
CTSB-228ENST00000533455 TGIF1Q15583 401 aa14.44□□□□□ -0.1
CTSB-228ENST00000533455 FAM27BQ5VT28 67 aa14.44□□□□□ -0.1
CTSB-228ENST00000533455 LHFPL2Q6ZUX7 228 aa14.44□□□□□ -0.1
CTSB-228ENST00000533455 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.44□□□□□ -0.1
CTSB-228ENST00000533455 OR4D5Q8NGN0 318 aa14.44□□□□□ -0.1
CTSB-228ENST00000533455 SNIP1Q8TAD8 396 aaKnown RBP14.44□□□□□ -0.1
CTSB-228ENST00000533455 SYT3Q9BQG1 590 aa14.44□□□□□ -0.1
CTSB-228ENST00000533455 RBM24Q9BX46 236 aaKnown RBP14.44□□□□□ -0.1
CTSB-228ENST00000533455 C11orf1Q9H5F2 150 aa14.44□□□□□ -0.1
CTSB-228ENST00000533455 KCNJ16Q9NPI9 418 aa14.44□□□□□ -0.1
CTSB-228ENST00000533455 GSN-AS1Q9NRJ2 163 aa14.44□□□□□ -0.1
CTSB-228ENST00000533455 TMED3Q9Y3Q3 217 aa14.44□□□□□ -0.1
CTSB-228ENST00000533455 ARID1AO14497 2285 aa14.44□□□□□ -0.1
CTSB-228ENST00000533455 MED12Q93074 2177 aa14.43□□□□□ -0.1
CTSB-228ENST00000533455 CCDC187A0A096LP49 1063 aa14.43□□□□□ -0.1
CTSB-228ENST00000533455 C1QL1O75973 258 aa14.43□□□□□ -0.1
CTSB-228ENST00000533455 CYC1P08574 325 aa14.43□□□□□ -0.1
CTSB-228ENST00000533455 DAOP14920 347 aa14.43□□□□□ -0.1
CTSB-228ENST00000533455 FXYD4P59646 89 aa14.43□□□□□ -0.1
CTSB-228ENST00000533455 CHAF1BQ13112 559 aa14.43□□□□□ -0.1
CTSB-228ENST00000533455 CLINT1Q14677 625 aa14.43□□□□□ -0.1
CTSB-228ENST00000533455 PHLDA2Q53GA4 152 aa14.43□□□□□ -0.1
CTSB-228ENST00000533455 TSPO2Q5TGU0 170 aa14.43□□□□□ -0.1
CTSB-228ENST00000533455 PRAMEF20Q5VT98 475 aa14.43□□□□□ -0.1
CTSB-228ENST00000533455 SLC22A25Q6T423 547 aa14.43□□□□□ -0.1
CTSB-228ENST00000533455 C1QL4Q86Z23 238 aa14.43□□□□□ -0.1
CTSB-228ENST00000533455 MAML2Q8IZL2 1156 aaPredicted RBP14.43□□□□□ -0.1
CTSB-228ENST00000533455 CCDC71LQ8N9Z2 235 aa14.43□□□□□ -0.1
CTSB-228ENST00000533455 REEP6Q96HR9 211 aa14.43□□□□□ -0.1
CTSB-228ENST00000533455 RSRP1Q9BUV0 290 aa14.43□□□□□ -0.1
CTSB-228ENST00000533455 C20orf24Q9BUV8 137 aa14.43□□□□□ -0.1
CTSB-228ENST00000533455 ZNF286AQ9HBT8 521 aa14.43□□□□□ -0.1
CTSB-228ENST00000533455 IL36GQ9NZH8 169 aa14.43□□□□□ -0.1
CTSB-228ENST00000533455 RARRES3Q9UL19 164 aa14.43□□□□□ -0.1
CTSB-228ENST00000533455 hCG_1809904A0A1W2PP81 198 aa14.42□□□□□ -0.1
CTSB-228ENST00000533455 FAM230AA0A1W2PPH8 454 aa14.42□□□□□ -0.1
CTSB-228ENST00000533455 A0A1W2PR64 198 aa14.42□□□□□ -0.1
CTSB-228ENST00000533455 A0A1W2PRV1 198 aa14.42□□□□□ -0.1
CTSB-228ENST00000533455 OR8U8P0C7N1 319 aa14.42□□□□□ -0.1
CTSB-228ENST00000533455 STARD6P59095 220 aa14.42□□□□□ -0.1
CTSB-228ENST00000533455 NHLH2Q02577 135 aa14.42□□□□□ -0.1
CTSB-228ENST00000533455 COL19A1Q14993 1142 aa14.42□□□□□ -0.1
CTSB-228ENST00000533455 RSPO4Q2I0M5 234 aaPredicted RBP14.42□□□□□ -0.1
CTSB-228ENST00000533455 TMEM42Q69YG0 159 aa14.42□□□□□ -0.1
CTSB-228ENST00000533455 OR8G5Q8NG78 346 aa14.42□□□□□ -0.1
CTSB-228ENST00000533455 OR10AD1Q8NGE0 317 aa14.42□□□□□ -0.1
CTSB-228ENST00000533455 OR5L1Q8NGL2 311 aa14.42□□□□□ -0.1
CTSB-228ENST00000533455 YPEL4Q96NS1 127 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms