RNA–Protein interactions for RNA: ENST00000532457.5

PACSIN3-209, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 5

Gene PACSIN3, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-209ENST00000532457 TMEM210A6NLX4 147 aa18.58■□□□□ 0.56
PACSIN3-209ENST00000532457 GEMIN2O14893 280 aaKnown RBP18.58■□□□□ 0.56
PACSIN3-209ENST00000532457 ORC5O43913 435 aa18.58■□□□□ 0.56
PACSIN3-209ENST00000532457 SERPINF1P36955 418 aa18.58■□□□□ 0.56
PACSIN3-209ENST00000532457 SRP9P49458 86 aaKnown RBP18.58■□□□□ 0.56
PACSIN3-209ENST00000532457 ZCCHC24Q8N2G6 241 aaKnown RBP18.58■□□□□ 0.56
PACSIN3-209ENST00000532457 SPERTQ8NA61 448 aa18.58■□□□□ 0.56
PACSIN3-209ENST00000532457 MARVELD3Q96A59 401 aa18.58■□□□□ 0.56
PACSIN3-209ENST00000532457 C14orf79Q96F83 325 aa18.58■□□□□ 0.56
PACSIN3-209ENST00000532457 ELMOD3Q96FG2 381 aa18.58■□□□□ 0.56
PACSIN3-209ENST00000532457 ARHGAP5-AS1Q96IT6 56 aa18.58■□□□□ 0.56
PACSIN3-209ENST00000532457 UFSP2Q9NUQ7 469 aa18.58■□□□□ 0.56
PACSIN3-209ENST00000532457 RABL2AQ9UBK7 228 aaPredicted RBP18.58■□□□□ 0.56
PACSIN3-209ENST00000532457 RABL2BQ9UNT1 228 aa18.58■□□□□ 0.56
PACSIN3-209ENST00000532457 ST3GAL6Q9Y274 331 aa18.58■□□□□ 0.56
PACSIN3-209ENST00000532457 PLSCR5A0PG75 271 aa18.57■□□□□ 0.56
PACSIN3-209ENST00000532457 FAM221AA4D161 298 aa18.57■□□□□ 0.56
PACSIN3-209ENST00000532457 TRAPPC2LH3BP13 241 aa18.57■□□□□ 0.56
PACSIN3-209ENST00000532457 GABARAPH6UMI1 98 aa18.57■□□□□ 0.56
PACSIN3-209ENST00000532457 IGHV1-46P01743 117 aa18.57■□□□□ 0.56
PACSIN3-209ENST00000532457 GABRR1P24046 479 aa18.57■□□□□ 0.56
PACSIN3-209ENST00000532457 BLVRBP30043 206 aaPredicted RBP18.57■□□□□ 0.56
PACSIN3-209ENST00000532457 ZNF81P51508 661 aa18.57■□□□□ 0.56
PACSIN3-209ENST00000532457 NKPD1Q17RQ9 610 aa18.57■□□□□ 0.56
PACSIN3-209ENST00000532457 OR56B1Q8NGI3 324 aa18.57■□□□□ 0.56
PACSIN3-209ENST00000532457 SEH1LQ96EE3 360 aa18.57■□□□□ 0.56
PACSIN3-209ENST00000532457 NKIRAS2Q9NYR9 191 aa18.57■□□□□ 0.56
PACSIN3-209ENST00000532457 CISD1Q9NZ45 108 aaKnown RBP18.57■□□□□ 0.56
PACSIN3-209ENST00000532457 HRNRQ86YZ3 2850 aaPredicted RBP18.57■□□□□ 0.56
PACSIN3-209ENST00000532457 CD200P41217 278 aa18.56■□□□□ 0.56
PACSIN3-209ENST00000532457 ERVK11-1P61568 191 aa18.56■□□□□ 0.56
PACSIN3-209ENST00000532457 RAB3CQ96E17 227 aa18.56■□□□□ 0.56
PACSIN3-209ENST00000532457 NUDT16L1Q9BRJ7 211 aaKnown RBP18.56■□□□□ 0.56
PACSIN3-209ENST00000532457 LRBAP50851 2863 aa18.56■□□□□ 0.56
PACSIN3-209ENST00000532457 MEIS3P1A6NDR6 274 aa18.56■□□□□ 0.56
PACSIN3-209ENST00000532457 PTBP3O95758 552 aaKnown RBP18.56■□□□□ 0.56
PACSIN3-209ENST00000532457 MELTFP08582 738 aa18.56■□□□□ 0.56
PACSIN3-209ENST00000532457 SSTR2P30874 369 aa18.56■□□□□ 0.56
PACSIN3-209ENST00000532457 PMELP40967 661 aa18.56■□□□□ 0.56
PACSIN3-209ENST00000532457 SNU13P55769 128 aaKnown RBP18.56■□□□□ 0.56
PACSIN3-209ENST00000532457 RBM11P57052 281 aaKnown RBP18.56■□□□□ 0.56
PACSIN3-209ENST00000532457 FGF12P61328 243 aa18.56■□□□□ 0.56
PACSIN3-209ENST00000532457 BRICD5Q6PL45 260 aa18.56■□□□□ 0.56
PACSIN3-209ENST00000532457 DCDC5Q6ZRR9 648 aa18.56■□□□□ 0.56
PACSIN3-209ENST00000532457 Q6ZTK2 550 aa18.56■□□□□ 0.56
PACSIN3-209ENST00000532457 FCAMRQ8WWV6 532 aa18.56■□□□□ 0.56
PACSIN3-209ENST00000532457 MRPS24Q96EL2 167 aaKnown RBP18.56■□□□□ 0.56
PACSIN3-209ENST00000532457 MEGF10Q96KG7 1140 aa18.56■□□□□ 0.56
PACSIN3-209ENST00000532457 OR2V2Q96R30 315 aa18.56■□□□□ 0.56
PACSIN3-209ENST00000532457 RBMX2Q9Y388 322 aaKnown RBP18.56■□□□□ 0.56
PACSIN3-209ENST00000532457 ISPDA4D126 451 aa18.55■□□□□ 0.56
PACSIN3-209ENST00000532457 AKR7A2O43488 359 aa18.55■□□□□ 0.56
PACSIN3-209ENST00000532457 CYB5AP00167 134 aa18.55■□□□□ 0.56
PACSIN3-209ENST00000532457 PGA5P0DJD9 388 aa18.55■□□□□ 0.56
PACSIN3-209ENST00000532457 HIST1H1DP16402 221 aaKnown RBP18.55■□□□□ 0.56
PACSIN3-209ENST00000532457 CPT2P23786 658 aa18.55■□□□□ 0.56
PACSIN3-209ENST00000532457 DUSP1P28562 367 aa18.55■□□□□ 0.56
PACSIN3-209ENST00000532457 APOBEC3AP31941 199 aaPredicted RBP18.55■□□□□ 0.56
PACSIN3-209ENST00000532457 PRSS3P35030 304 aa18.55■□□□□ 0.56
PACSIN3-209ENST00000532457 SCN1BQ07699 218 aa18.55■□□□□ 0.56
PACSIN3-209ENST00000532457 ZNF672Q499Z4 452 aaPredicted RBP18.55■□□□□ 0.56
PACSIN3-209ENST00000532457 TRIQKQ629K1 86 aa18.55■□□□□ 0.56
PACSIN3-209ENST00000532457 WDR82Q6UXN9 313 aa18.55■□□□□ 0.56
PACSIN3-209ENST00000532457 C6orf201Q7Z4U5 140 aa18.55■□□□□ 0.56
PACSIN3-209ENST00000532457 POC5Q8NA72 575 aa18.55■□□□□ 0.56
PACSIN3-209ENST00000532457 GPX8Q8TED1 209 aa18.55■□□□□ 0.56
PACSIN3-209ENST00000532457 NRIP2Q9BQI9 281 aa18.55■□□□□ 0.56
PACSIN3-209ENST00000532457 PECRQ9BY49 303 aa18.55■□□□□ 0.56
PACSIN3-209ENST00000532457 BAHCC1Q9P281 2608 aa18.54■□□□□ 0.56
PACSIN3-209ENST00000532457 MFNGO00587 321 aa18.54■□□□□ 0.56
PACSIN3-209ENST00000532457 SSX4O60224 188 aa18.54■□□□□ 0.56
PACSIN3-209ENST00000532457 FCER2P06734 321 aa18.54■□□□□ 0.56
PACSIN3-209ENST00000532457 GDNFP39905 211 aa18.54■□□□□ 0.56
PACSIN3-209ENST00000532457 GMFBP60983 142 aa18.54■□□□□ 0.56
PACSIN3-209ENST00000532457 TLE4Q04727 773 aa18.54■□□□□ 0.56
PACSIN3-209ENST00000532457 ITLN1Q8WWA0 313 aa18.54■□□□□ 0.56
PACSIN3-209ENST00000532457 CACNA1DQ01668 2161 aa18.54■□□□□ 0.56
PACSIN3-209ENST00000532457 HECTD1Q9ULT8 2610 aa18.54■□□□□ 0.56
PACSIN3-209ENST00000532457 A0A1W2PPR1 153 aa18.53■□□□□ 0.56
PACSIN3-209ENST00000532457 WNT9BO14905 357 aa18.53■□□□□ 0.56
PACSIN3-209ENST00000532457 SSX5O60225 188 aa18.53■□□□□ 0.56
PACSIN3-209ENST00000532457 PRKACAP17612 351 aa18.53■□□□□ 0.56
PACSIN3-209ENST00000532457 GDPD3Q7L5L3 318 aa18.53■□□□□ 0.56
PACSIN3-209ENST00000532457 ZNF295-AS1Q8N0V1 137 aa18.53■□□□□ 0.56
PACSIN3-209ENST00000532457 FAM58AQ8N1B3 248 aa18.53■□□□□ 0.56
PACSIN3-209ENST00000532457 C19orf18Q8NEA5 215 aa18.53■□□□□ 0.56
PACSIN3-209ENST00000532457 C15orf40Q8WUR7 153 aa18.53■□□□□ 0.56
PACSIN3-209ENST00000532457 CLEC4MQ9H2X3 399 aaPredicted RBP18.53■□□□□ 0.56
PACSIN3-209ENST00000532457 PCDHB16Q9NRJ7 776 aa18.53■□□□□ 0.56
PACSIN3-209ENST00000532457 C1orf123Q9NWV4 160 aa18.53■□□□□ 0.56
PACSIN3-209ENST00000532457 A6NLC8 198 aa18.53■□□□□ 0.56
PACSIN3-209ENST00000532457 SCGNO76038 276 aa18.53■□□□□ 0.56
PACSIN3-209ENST00000532457 ACAA1P09110 424 aaPredicted RBP18.53■□□□□ 0.56
PACSIN3-209ENST00000532457 SPNP16150 400 aa18.53■□□□□ 0.56
PACSIN3-209ENST00000532457 MRPS10P82664 201 aaKnown RBP18.53■□□□□ 0.56
PACSIN3-209ENST00000532457 RGS21Q2M5E4 152 aa18.53■□□□□ 0.56
PACSIN3-209ENST00000532457 NUDCD2Q8WVJ2 157 aa18.53■□□□□ 0.56
PACSIN3-209ENST00000532457 C11orf54Q9H0W9 315 aaPredicted RBP18.53■□□□□ 0.56
PACSIN3-209ENST00000532457 WDR13Q9H1Z4 485 aa18.53■□□□□ 0.56
PACSIN3-209ENST00000532457 NBPF19A0A087WUL8 3843 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms