RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 PPA2Q9H2U2 334 aa4.81□□□□□ -1.64
PCF11-205ENST00000530906 RIMS4Q9H426 269 aaPredicted RBP4.81□□□□□ -1.64
PCF11-205ENST00000530906 BANF2Q9H503 90 aa4.81□□□□□ -1.64
PCF11-205ENST00000530906 ZMAT3Q9HA38 289 aaKnown RBP4.81□□□□□ -1.64
PCF11-205ENST00000530906 SPACA1Q9HBV2 294 aa4.81□□□□□ -1.64
PCF11-205ENST00000530906 SLC7A10Q9NS82 523 aa4.81□□□□□ -1.64
PCF11-205ENST00000530906 CA10Q9NS85 328 aa4.81□□□□□ -1.64
PCF11-205ENST00000530906 PLEKHJ1Q9NW61 149 aa4.81□□□□□ -1.64
PCF11-205ENST00000530906 IL17BQ9UHF5 180 aa4.81□□□□□ -1.64
PCF11-205ENST00000530906 SLC23A1Q9UHI7 598 aa4.81□□□□□ -1.64
PCF11-205ENST00000530906 GPR132Q9UNW8 380 aa4.81□□□□□ -1.64
PCF11-205ENST00000530906 VSIG4Q9Y279 399 aa4.81□□□□□ -1.64
PCF11-205ENST00000530906 MEMO1Q9Y316 297 aa4.81□□□□□ -1.64
PCF11-205ENST00000530906 MPC1Q9Y5U8 109 aa4.81□□□□□ -1.64
PCF11-205ENST00000530906 TNRC6AQ8NDV7 1962 aaKnown RBP4.8□□□□□ -1.64
PCF11-205ENST00000530906 TRBV6-7A0A0A0MS04 114 aa4.8□□□□□ -1.64
PCF11-205ENST00000530906 TRAV17A0A0B4J275 112 aa4.8□□□□□ -1.64
PCF11-205ENST00000530906 OR5H14A6NHG9 310 aa4.8□□□□□ -1.64
PCF11-205ENST00000530906 SLC22A20A6NK97 555 aa4.8□□□□□ -1.64
PCF11-205ENST00000530906 OR2AT4A6NND4 320 aa4.8□□□□□ -1.64
PCF11-205ENST00000530906 FAM166BA8MTA8 275 aa4.8□□□□□ -1.64
PCF11-205ENST00000530906 E9PLN8 166 aa4.8□□□□□ -1.64
PCF11-205ENST00000530906 PDCD6O75340 191 aa4.8□□□□□ -1.64
PCF11-205ENST00000530906 RAD51DO75771 328 aa4.8□□□□□ -1.64
PCF11-205ENST00000530906 TOXO94900 526 aa4.8□□□□□ -1.64
PCF11-205ENST00000530906 ZNF205O95201 554 aa4.8□□□□□ -1.64
PCF11-205ENST00000530906 SFT2D2O95562 160 aa4.8□□□□□ -1.64
PCF11-205ENST00000530906 CTSDP07339 412 aaPredicted RBP4.8□□□□□ -1.64
PCF11-205ENST00000530906 DBHP09172 617 aa4.8□□□□□ -1.64
PCF11-205ENST00000530906 FTH1P19P0C7X4 201 aa4.8□□□□□ -1.64
PCF11-205ENST00000530906 SERPINA2P20848 420 aa4.8□□□□□ -1.64
PCF11-205ENST00000530906 CHATP28329 748 aa4.8□□□□□ -1.64
PCF11-205ENST00000530906 APLNRP35414 380 aa4.8□□□□□ -1.64
PCF11-205ENST00000530906 TNFSF10P50591 281 aa4.8□□□□□ -1.64
PCF11-205ENST00000530906 SNU13P55769 128 aaKnown RBP4.8□□□□□ -1.64
PCF11-205ENST00000530906 UBA52P62987 128 aaKnown RBP4.8□□□□□ -1.64
PCF11-205ENST00000530906 ARG2P78540 354 aa4.8□□□□□ -1.64
PCF11-205ENST00000530906 ZNF92Q03936 586 aa4.8□□□□□ -1.64
PCF11-205ENST00000530906 PPP1R1AQ13522 171 aa4.8□□□□□ -1.64
PCF11-205ENST00000530906 EXOSC2Q13868 293 aaKnown RBP4.8□□□□□ -1.64
PCF11-205ENST00000530906 MPV17LQ2QL34 196 aa4.8□□□□□ -1.64
PCF11-205ENST00000530906 EIF2S3LQ2VIR3 472 aaKnown RBP4.8□□□□□ -1.64
PCF11-205ENST00000530906 CEACAM21Q3KPI0 293 aa4.8□□□□□ -1.64
PCF11-205ENST00000530906 LY6G6FQ5SQ64 297 aa4.8□□□□□ -1.64
PCF11-205ENST00000530906 FBXW9Q5XUX1 488 aa4.8□□□□□ -1.64
PCF11-205ENST00000530906 PLCXD3Q63HM9 321 aa4.8□□□□□ -1.64
PCF11-205ENST00000530906 TMEM211Q6ICI0 200 aa4.8□□□□□ -1.64
PCF11-205ENST00000530906 GSG1LQ6UXU4 331 aa4.8□□□□□ -1.64
PCF11-205ENST00000530906 LINC00696Q6ZRV3 163 aa4.8□□□□□ -1.64
PCF11-205ENST00000530906 TMUB2Q71RG4 321 aa4.8□□□□□ -1.64
PCF11-205ENST00000530906 MRPL21Q7Z2W9 205 aaKnown RBP4.8□□□□□ -1.64
PCF11-205ENST00000530906 ZNF546Q86UE3 836 aa4.8□□□□□ -1.64
PCF11-205ENST00000530906 MKXQ8IYA7 352 aa4.8□□□□□ -1.64
PCF11-205ENST00000530906 FAM185AQ8N0U4 392 aa4.8□□□□□ -1.64
PCF11-205ENST00000530906 OSR2Q8N2R0 312 aa4.8□□□□□ -1.64
PCF11-205ENST00000530906 KCNRGQ8N5I3 272 aa4.8□□□□□ -1.64
PCF11-205ENST00000530906 GVQW1Q8N7I0 195 aa4.8□□□□□ -1.64
PCF11-205ENST00000530906 C1orf162Q8NEQ5 155 aaPredicted RBP4.8□□□□□ -1.64
PCF11-205ENST00000530906 OR4S1Q8NGB4 309 aa4.8□□□□□ -1.64
PCF11-205ENST00000530906 OR5A2Q8NGI9 324 aa4.8□□□□□ -1.64
PCF11-205ENST00000530906 AKR7LQ8NHP1 331 aa4.8□□□□□ -1.64
PCF11-205ENST00000530906 THAP6Q8TBB0 222 aa4.8□□□□□ -1.64
PCF11-205ENST00000530906 FNDC9Q8TBE3 224 aa4.8□□□□□ -1.64
PCF11-205ENST00000530906 LRRC20Q8TCA0 184 aa4.8□□□□□ -1.64
PCF11-205ENST00000530906 SCARB1Q8WTV0 552 aa4.8□□□□□ -1.64
PCF11-205ENST00000530906 CMBLQ96DG6 245 aa4.8□□□□□ -1.64
PCF11-205ENST00000530906 PIK3IP1Q96FE7 263 aa4.8□□□□□ -1.64
PCF11-205ENST00000530906 SPACA5Q96QH8 159 aa4.8□□□□□ -1.64
PCF11-205ENST00000530906 NICN1Q9BSH3 213 aa4.8□□□□□ -1.64
PCF11-205ENST00000530906 SOX7Q9BT81 388 aa4.8□□□□□ -1.64
PCF11-205ENST00000530906 PDCD10Q9BUL8 212 aa4.8□□□□□ -1.64
PCF11-205ENST00000530906 MFFQ9GZY8 342 aa4.8□□□□□ -1.64
PCF11-205ENST00000530906 LDAHQ9H6V9 325 aa4.8□□□□□ -1.64
PCF11-205ENST00000530906 ELL3Q9HB65 397 aaPredicted RBP4.8□□□□□ -1.64
PCF11-205ENST00000530906 C12orf4Q9NQ89 552 aa4.8□□□□□ -1.64
PCF11-205ENST00000530906 GPR173Q9NS66 373 aa4.8□□□□□ -1.64
PCF11-205ENST00000530906 ZFP57Q9NU63 452 aa4.8□□□□□ -1.64
PCF11-205ENST00000530906 FAM86C1Q9NVL1 165 aa4.8□□□□□ -1.64
PCF11-205ENST00000530906 NECAP2Q9NVZ3 263 aa4.8□□□□□ -1.64
PCF11-205ENST00000530906 MYEF2Q9P2K5 600 aaKnown RBP4.8□□□□□ -1.64
PCF11-205ENST00000530906 ANXA10Q9UJ72 324 aa4.8□□□□□ -1.64
PCF11-205ENST00000530906 C14orf166Q9Y224 244 aaKnown RBP4.8□□□□□ -1.64
PCF11-205ENST00000530906 OSGIN2Q9Y236 505 aa4.8□□□□□ -1.64
PCF11-205ENST00000530906 AHCTF1Q8WYP5 2266 aa4.8□□□□□ -1.64
PCF11-205ENST00000530906 PCNX2A6NKB5 2137 aa4.79□□□□□ -1.64
PCF11-205ENST00000530906 KNTC1P50748 2209 aa4.79□□□□□ -1.64
PCF11-205ENST00000530906 FXYD6-FXYD2A0A087WZ82 144 aa4.79□□□□□ -1.64
PCF11-205ENST00000530906 KIR2DS1A0A191URI9 304 aa4.79□□□□□ -1.64
PCF11-205ENST00000530906 FAM230AA0A1W2PPH8 454 aa4.79□□□□□ -1.64
PCF11-205ENST00000530906 KANTRA0A1W2PQU2 76 aa4.79□□□□□ -1.64
PCF11-205ENST00000530906 PQLC2LA1A4F0 135 aa4.79□□□□□ -1.64
PCF11-205ENST00000530906 ZNF891A8MT65 544 aaPredicted RBP4.79□□□□□ -1.64
PCF11-205ENST00000530906 MASP2O00187 686 aa4.79□□□□□ -1.64
PCF11-205ENST00000530906 AQP7O14520 342 aa4.79□□□□□ -1.64
PCF11-205ENST00000530906 ARPC5O15511 151 aa4.79□□□□□ -1.64
PCF11-205ENST00000530906 TSC22D2O75157 780 aa4.79□□□□□ -1.64
PCF11-205ENST00000530906 MPC2O95563 127 aa4.79□□□□□ -1.64
PCF11-205ENST00000530906 DIRAS3O95661 229 aa4.79□□□□□ -1.64
PCF11-205ENST00000530906 PMP2P02689 132 aa4.79□□□□□ -1.64
PCF11-205ENST00000530906 CRHP06850 196 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms