RNA–Protein interactions for RNA: ENST00000530495.1

CAPN1-219, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-219ENST00000530495 LRGUKQ96M69 825 aa11.96□□□□□ -0.49
CAPN1-219ENST00000530495 MOB1AQ9H8S9 216 aa11.96□□□□□ -0.49
CAPN1-219ENST00000530495 SEBOXQ9HB31 216 aaPredicted RBP11.96□□□□□ -0.49
CAPN1-219ENST00000530495 MTCH1Q9NZJ7 389 aa11.96□□□□□ -0.49
CAPN1-219ENST00000530495 IKZF2Q9UKS7 526 aa11.96□□□□□ -0.49
CAPN1-219ENST00000530495 hADV38S2A0JD32 116 aa11.95□□□□□ -0.5
CAPN1-219ENST00000530495 A6NIN4 97 aa11.95□□□□□ -0.5
CAPN1-219ENST00000530495 LOC110117498-PIK3R3F6TDL0 507 aa11.95□□□□□ -0.5
CAPN1-219ENST00000530495 F8VVB4 439 aa11.95□□□□□ -0.5
CAPN1-219ENST00000530495 F8VWA3 439 aa11.95□□□□□ -0.5
CAPN1-219ENST00000530495 PF4V1P10720 104 aa11.95□□□□□ -0.5
CAPN1-219ENST00000530495 ACTR3P61158 418 aa11.95□□□□□ -0.5
CAPN1-219ENST00000530495 SLC35A2P78381 396 aa11.95□□□□□ -0.5
CAPN1-219ENST00000530495 SNAPC1Q16533 368 aa11.95□□□□□ -0.5
CAPN1-219ENST00000530495 HS3ST5Q8IZT8 346 aa11.95□□□□□ -0.5
CAPN1-219ENST00000530495 RCC1LQ96I51 464 aaKnown RBP11.95□□□□□ -0.5
CAPN1-219ENST00000530495 NSL1Q96IY1 281 aa11.95□□□□□ -0.5
CAPN1-219ENST00000530495 SNX22Q96L94 193 aa11.95□□□□□ -0.5
CAPN1-219ENST00000530495 CEP19Q96LK0 163 aa11.95□□□□□ -0.5
CAPN1-219ENST00000530495 APOL4Q9BPW4 351 aa11.95□□□□□ -0.5
CAPN1-219ENST00000530495 TTTY10Q9BZA0 68 aa11.95□□□□□ -0.5
CAPN1-219ENST00000530495 TVP23BQ9NYZ1 205 aa11.95□□□□□ -0.5
CAPN1-219ENST00000530495 OR52A1Q9UKL2 312 aa11.95□□□□□ -0.5
CAPN1-219ENST00000530495 GTF2A1LQ9UNN4 478 aa11.95□□□□□ -0.5
CAPN1-219ENST00000530495 TSSC4Q9Y5U2 329 aaPredicted RBP11.95□□□□□ -0.5
CAPN1-219ENST00000530495 SESN1Q9Y6P5 492 aa11.95□□□□□ -0.5
CAPN1-219ENST00000530495 R4GMQ9 66 aa11.95□□□□□ -0.5
CAPN1-219ENST00000530495 IGHV2-26A0A0B4J1V2 119 aa11.94□□□□□ -0.5
CAPN1-219ENST00000530495 FAM230AA0A1W2PPH8 454 aa11.94□□□□□ -0.5
CAPN1-219ENST00000530495 TCRBV4S1A1TA0A5B7 111 aa11.94□□□□□ -0.5
CAPN1-219ENST00000530495 TMEM82A0PJX8 343 aa11.94□□□□□ -0.5
CAPN1-219ENST00000530495 MAGEB4O15481 346 aaPredicted RBP11.94□□□□□ -0.5
CAPN1-219ENST00000530495 DUS4LO95620 317 aaKnown RBP11.94□□□□□ -0.5
CAPN1-219ENST00000530495 KRTAP10-11P60412 298 aa11.94□□□□□ -0.5
CAPN1-219ENST00000530495 DEFB121Q5J5C9 76 aa11.94□□□□□ -0.5
CAPN1-219ENST00000530495 BCL2L15Q5TBC7 163 aa11.94□□□□□ -0.5
CAPN1-219ENST00000530495 ZNF322Q6U7Q0 402 aaPredicted RBP11.94□□□□□ -0.5
CAPN1-219ENST00000530495 ZBTB49Q6ZSB9 765 aa11.94□□□□□ -0.5
CAPN1-219ENST00000530495 C16orf82Q7Z2V1 217 aa11.94□□□□□ -0.5
CAPN1-219ENST00000530495 ZNF676Q8N7Q3 588 aa11.94□□□□□ -0.5
CAPN1-219ENST00000530495 NDNFQ8TB73 568 aa11.94□□□□□ -0.5
CAPN1-219ENST00000530495 CANT1Q8WVQ1 401 aa11.94□□□□□ -0.5
CAPN1-219ENST00000530495 MNTQ99583 582 aa11.94□□□□□ -0.5
CAPN1-219ENST00000530495 CLEC7AQ9BXN2 247 aa11.94□□□□□ -0.5
CAPN1-219ENST00000530495 TMEM133Q9H2Q1 129 aa11.94□□□□□ -0.5
CAPN1-219ENST00000530495 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.94□□□□□ -0.5
CAPN1-219ENST00000530495 SLC7A11Q9UPY5 501 aa11.94□□□□□ -0.5
CAPN1-219ENST00000530495 SNX5Q9Y5X3 404 aa11.94□□□□□ -0.5
CAPN1-219ENST00000530495 LINC00312Q9Y6C7 94 aa11.94□□□□□ -0.5
CAPN1-219ENST00000530495 DNAJC8O75937 253 aaPredicted RBP11.93□□□□□ -0.5
CAPN1-219ENST00000530495 HOXB6P17509 224 aaKnown RBP11.93□□□□□ -0.5
CAPN1-219ENST00000530495 CCL1P22362 96 aa11.93□□□□□ -0.5
CAPN1-219ENST00000530495 HTR1DP28221 377 aa11.93□□□□□ -0.5
CAPN1-219ENST00000530495 CRISP1P54107 249 aa11.93□□□□□ -0.5
CAPN1-219ENST00000530495 CXCR4P61073 352 aa11.93□□□□□ -0.5
CAPN1-219ENST00000530495 IL18R1Q13478 541 aa11.93□□□□□ -0.5
CAPN1-219ENST00000530495 UBE2V2Q15819 145 aa11.93□□□□□ -0.5
CAPN1-219ENST00000530495 C11orf87Q6NUJ2 197 aa11.93□□□□□ -0.5
CAPN1-219ENST00000530495 CCDC121Q6ZUS5 278 aa11.93□□□□□ -0.5
CAPN1-219ENST00000530495 MEPCEQ7L2J0 689 aaKnown RBP11.93□□□□□ -0.5
CAPN1-219ENST00000530495 EGFL6Q8IUX8 553 aa11.93□□□□□ -0.5
CAPN1-219ENST00000530495 TRMT10AQ8TBZ6 339 aaKnown RBP11.93□□□□□ -0.5
CAPN1-219ENST00000530495 AKR1E2Q96JD6 320 aa11.93□□□□□ -0.5
CAPN1-219ENST00000530495 CNN2Q99439 309 aaKnown RBP11.93□□□□□ -0.5
CAPN1-219ENST00000530495 CADM1Q9BY67 442 aaKnown RBP11.93□□□□□ -0.5
CAPN1-219ENST00000530495 LIN7BQ9HAP6 207 aa11.93□□□□□ -0.5
CAPN1-219ENST00000530495 IGKV1-27A0A075B6S5 117 aa11.92□□□□□ -0.5
CAPN1-219ENST00000530495 WI2-2373I1.2A0A1W2PRP0 233 aa11.92□□□□□ -0.5
CAPN1-219ENST00000530495 AQP12BA6NM10 295 aa11.92□□□□□ -0.5
CAPN1-219ENST00000530495 PF4P02776 101 aa11.92□□□□□ -0.5
CAPN1-219ENST00000530495 PEX2P28328 305 aa11.92□□□□□ -0.5
CAPN1-219ENST00000530495 EGFEM1PQ0D2K5 195 aa11.92□□□□□ -0.5
CAPN1-219ENST00000530495 EDDM3AQ14507 147 aa11.92□□□□□ -0.5
CAPN1-219ENST00000530495 PLEKHG7Q6ZR37 379 aa11.92□□□□□ -0.5
CAPN1-219ENST00000530495 AQP12AQ8IXF9 295 aa11.92□□□□□ -0.5
CAPN1-219ENST00000530495 OR52N4Q8NGI2 321 aa11.92□□□□□ -0.5
CAPN1-219ENST00000530495 OR4P4Q8NGL7 312 aa11.92□□□□□ -0.5
CAPN1-219ENST00000530495 MYDGFQ969H8 173 aa11.92□□□□□ -0.5
CAPN1-219ENST00000530495 SLAMF9Q96A28 289 aa11.92□□□□□ -0.5
CAPN1-219ENST00000530495 INPP5EQ9NRR6 644 aa11.92□□□□□ -0.5
CAPN1-219ENST00000530495 MRM2Q9UI43 246 aaKnown RBP11.92□□□□□ -0.5
CAPN1-219ENST00000530495 PRKYO43930 277 aa11.91□□□□□ -0.5
CAPN1-219ENST00000530495 PSPNO60542 156 aa11.91□□□□□ -0.5
CAPN1-219ENST00000530495 MMP23AO75900 390 aa11.91□□□□□ -0.5
CAPN1-219ENST00000530495 HAND1O96004 215 aa11.91□□□□□ -0.5
CAPN1-219ENST00000530495 IGHA1P01876 353 aa11.91□□□□□ -0.5
CAPN1-219ENST00000530495 LPLP06858 475 aa11.91□□□□□ -0.5
CAPN1-219ENST00000530495 BRS3P32247 399 aa11.91□□□□□ -0.5
CAPN1-219ENST00000530495 FUT6P51993 359 aa11.91□□□□□ -0.5
CAPN1-219ENST00000530495 GNGT1P63211 74 aa11.91□□□□□ -0.5
CAPN1-219ENST00000530495 EFNB1P98172 346 aa11.91□□□□□ -0.5
CAPN1-219ENST00000530495 PTGES3Q15185 160 aaKnown RBP11.91□□□□□ -0.5
CAPN1-219ENST00000530495 GRK1Q15835 563 aa11.91□□□□□ -0.5
CAPN1-219ENST00000530495 SLX4IPQ5VYV7 408 aa11.91□□□□□ -0.5
CAPN1-219ENST00000530495 SLC25A26Q70HW3 274 aa11.91□□□□□ -0.5
CAPN1-219ENST00000530495 SLC35F2Q8IXU6 374 aa11.91□□□□□ -0.5
CAPN1-219ENST00000530495 ENTHD1Q8IYW4 607 aa11.91□□□□□ -0.5
CAPN1-219ENST00000530495 TPRX1Q8N7U7 411 aa11.91□□□□□ -0.5
CAPN1-219ENST00000530495 DNAJC9Q8WXX5 260 aa11.91□□□□□ -0.5
CAPN1-219ENST00000530495 STMN2Q93045 179 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms