RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 UBE2NLQ5JXB2 153 aa8.97□□□□□ -0.97
SOX6-213ENST00000530378 MZT2AQ6P582 158 aa8.97□□□□□ -0.97
SOX6-213ENST00000530378 CMTM4Q8IZR5 234 aa8.97□□□□□ -0.97
SOX6-213ENST00000530378 YIPF5Q969M3 257 aa8.97□□□□□ -0.97
SOX6-213ENST00000530378 KCTD12Q96CX2 325 aaKnown RBP8.97□□□□□ -0.97
SOX6-213ENST00000530378 CST11Q9H112 138 aa8.97□□□□□ -0.97
SOX6-213ENST00000530378 ATG5Q9H1Y0 275 aa8.97□□□□□ -0.97
SOX6-213ENST00000530378 TMEM14DPA8MWL7 114 aa8.96□□□□□ -0.97
SOX6-213ENST00000530378 HSPB6O14558 160 aa8.96□□□□□ -0.97
SOX6-213ENST00000530378 GEMIN2O14893 280 aaKnown RBP8.96□□□□□ -0.97
SOX6-213ENST00000530378 LDLRAD4O15165 306 aa8.96□□□□□ -0.97
SOX6-213ENST00000530378 PTBP3O95758 552 aaKnown RBP8.96□□□□□ -0.97
SOX6-213ENST00000530378 IRF2P14316 349 aa8.96□□□□□ -0.97
SOX6-213ENST00000530378 CFPP27918 469 aa8.96□□□□□ -0.97
SOX6-213ENST00000530378 GATA4P43694 442 aa8.96□□□□□ -0.97
SOX6-213ENST00000530378 VEGFCP49767 419 aa8.96□□□□□ -0.97
SOX6-213ENST00000530378 TAF9Q16594 264 aa8.96□□□□□ -0.97
SOX6-213ENST00000530378 RNASE12Q5GAN4 147 aaKnown RBP8.96□□□□□ -0.97
SOX6-213ENST00000530378 NKAPLQ5M9Q1 402 aa8.96□□□□□ -0.97
SOX6-213ENST00000530378 CNIH2Q6PI25 160 aa8.96□□□□□ -0.97
SOX6-213ENST00000530378 FAM58AQ8N1B3 248 aa8.96□□□□□ -0.97
SOX6-213ENST00000530378 OSR2Q8N2R0 312 aa8.96□□□□□ -0.97
SOX6-213ENST00000530378 GCSAMQ8N6F7 178 aa8.96□□□□□ -0.97
SOX6-213ENST00000530378 CELF2-AS1Q8N7Q2 184 aa8.96□□□□□ -0.97
SOX6-213ENST00000530378 PXT1Q8NFP0 134 aa8.96□□□□□ -0.97
SOX6-213ENST00000530378 OR4M1Q8NGD0 313 aa8.96□□□□□ -0.97
SOX6-213ENST00000530378 OR51T1Q8NGJ9 327 aa8.96□□□□□ -0.97
SOX6-213ENST00000530378 OR6Q1Q8NGQ2 317 aa8.96□□□□□ -0.97
SOX6-213ENST00000530378 OR11L1Q8NGX0 322 aa8.96□□□□□ -0.97
SOX6-213ENST00000530378 ACOT12Q8WYK0 555 aa8.96□□□□□ -0.97
SOX6-213ENST00000530378 GCDHQ92947 438 aaPredicted RBP8.96□□□□□ -0.97
SOX6-213ENST00000530378 C14orf79Q96F83 325 aa8.96□□□□□ -0.97
SOX6-213ENST00000530378 NRIP2Q9BQI9 281 aa8.96□□□□□ -0.97
SOX6-213ENST00000530378 MMP27Q9H306 513 aa8.96□□□□□ -0.97
SOX6-213ENST00000530378 RNF7Q9UBF6 113 aa8.96□□□□□ -0.97
SOX6-213ENST00000530378 SPATA2Q9UM82 520 aa8.96□□□□□ -0.97
SOX6-213ENST00000530378 CCDC168Q8NDH2 2452 aa8.96□□□□□ -0.97
SOX6-213ENST00000530378 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.96□□□□□ -0.98
SOX6-213ENST00000530378 UBBP0CG47 229 aa8.96□□□□□ -0.98
SOX6-213ENST00000530378 PTHLHP12272 177 aa8.96□□□□□ -0.98
SOX6-213ENST00000530378 DAOP14920 347 aa8.96□□□□□ -0.98
SOX6-213ENST00000530378 SSTR2P30874 369 aa8.96□□□□□ -0.98
SOX6-213ENST00000530378 S100A5P33763 92 aa8.96□□□□□ -0.98
SOX6-213ENST00000530378 ART1P52961 327 aa8.96□□□□□ -0.98
SOX6-213ENST00000530378 RBM11P57052 281 aaKnown RBP8.96□□□□□ -0.98
SOX6-213ENST00000530378 AVPI1Q5T686 147 aa8.96□□□□□ -0.98
SOX6-213ENST00000530378 BRICD5Q6PL45 260 aa8.96□□□□□ -0.98
SOX6-213ENST00000530378 ASCL4Q6XD76 172 aa8.96□□□□□ -0.98
SOX6-213ENST00000530378 ZSCAN4Q8NAM6 433 aaPredicted RBP8.96□□□□□ -0.98
SOX6-213ENST00000530378 POC1AQ8NBT0 407 aa8.96□□□□□ -0.98
SOX6-213ENST00000530378 KCNG3Q8TAE7 436 aa8.96□□□□□ -0.98
SOX6-213ENST00000530378 PERPQ96FX8 193 aa8.96□□□□□ -0.98
SOX6-213ENST00000530378 DIRAS2Q96HU8 199 aa8.96□□□□□ -0.98
SOX6-213ENST00000530378 LPAR5Q9H1C0 372 aa8.96□□□□□ -0.98
SOX6-213ENST00000530378 ZMAT3Q9HA38 289 aaKnown RBP8.96□□□□□ -0.98
SOX6-213ENST00000530378 TMEM106BQ9NUM4 274 aa8.96□□□□□ -0.98
SOX6-213ENST00000530378 EXTL2Q9UBQ6 330 aa8.96□□□□□ -0.98
SOX6-213ENST00000530378 DNAJB11Q9UBS4 358 aa8.96□□□□□ -0.98
SOX6-213ENST00000530378 ST3GAL6Q9Y274 331 aa8.96□□□□□ -0.98
SOX6-213ENST00000530378 ETV7Q9Y603 341 aa8.96□□□□□ -0.98
SOX6-213ENST00000530378 LRRC30A6NM36 301 aa8.95□□□□□ -0.98
SOX6-213ENST00000530378 SRRM5B3KS81 715 aa8.95□□□□□ -0.98
SOX6-213ENST00000530378 H7C417 338 aa8.95□□□□□ -0.98
SOX6-213ENST00000530378 SIRPB1O00241 398 aa8.95□□□□□ -0.98
SOX6-213ENST00000530378 SOCS1O15524 211 aa8.95□□□□□ -0.98
SOX6-213ENST00000530378 OR7C1O76099 320 aaPredicted RBP8.95□□□□□ -0.98
SOX6-213ENST00000530378 IGHV4-39P01824 125 aa8.95□□□□□ -0.98
SOX6-213ENST00000530378 GTF2F2P13984 249 aa8.95□□□□□ -0.98
SOX6-213ENST00000530378 CDK2P24941 298 aa8.95□□□□□ -0.98
SOX6-213ENST00000530378 TNFSF8P32971 234 aa8.95□□□□□ -0.98
SOX6-213ENST00000530378 RPS27AP62979 156 aaKnown RBP8.95□□□□□ -0.98
SOX6-213ENST00000530378 IKZF1Q13422 519 aa8.95□□□□□ -0.98
SOX6-213ENST00000530378 HFEQ30201 348 aa8.95□□□□□ -0.98
SOX6-213ENST00000530378 ACP7Q6ZNF0 438 aa8.95□□□□□ -0.98
SOX6-213ENST00000530378 OR2W3Q7Z3T1 314 aa8.95□□□□□ -0.98
SOX6-213ENST00000530378 SAXO1Q8IYX7 474 aa8.95□□□□□ -0.98
SOX6-213ENST00000530378 CHST4Q8NCG5 386 aa8.95□□□□□ -0.98
SOX6-213ENST00000530378 DYRK2Q92630 601 aa8.95□□□□□ -0.98
SOX6-213ENST00000530378 Q96M66 194 aa8.95□□□□□ -0.98
SOX6-213ENST00000530378 NARFLQ9H6Q4 476 aa8.95□□□□□ -0.98
SOX6-213ENST00000530378 ING3Q9NXR8 418 aa8.95□□□□□ -0.98
SOX6-213ENST00000530378 MRPS7Q9Y2R9 242 aaKnown RBP8.95□□□□□ -0.98
SOX6-213ENST00000530378 PEX16Q9Y5Y5 336 aa8.95□□□□□ -0.98
SOX6-213ENST00000530378 A0A1B0GW55 424 aa8.94□□□□□ -0.98
SOX6-213ENST00000530378 VGLL3A8MV65 326 aa8.94□□□□□ -0.98
SOX6-213ENST00000530378 SSX4O60224 188 aa8.94□□□□□ -0.98
SOX6-213ENST00000530378 DUX4L2P0CJ85 424 aa8.94□□□□□ -0.98
SOX6-213ENST00000530378 DUX4L3P0CJ86 424 aa8.94□□□□□ -0.98
SOX6-213ENST00000530378 DUX4L4P0CJ87 422 aa8.94□□□□□ -0.98
SOX6-213ENST00000530378 DUX4L5P0CJ88 424 aa8.94□□□□□ -0.98
SOX6-213ENST00000530378 DUX4L6P0CJ89 424 aa8.94□□□□□ -0.98
SOX6-213ENST00000530378 DUX4L7P0CJ90 424 aa8.94□□□□□ -0.98
SOX6-213ENST00000530378 FGF12P61328 243 aa8.94□□□□□ -0.98
SOX6-213ENST00000530378 ERVK11-1P61568 191 aa8.94□□□□□ -0.98
SOX6-213ENST00000530378 SMIM21Q3B7S5 101 aa8.94□□□□□ -0.98
SOX6-213ENST00000530378 ATAD3CQ5T2N8 411 aa8.94□□□□□ -0.98
SOX6-213ENST00000530378 OLFML2AQ68BL7 652 aa8.94□□□□□ -0.98
SOX6-213ENST00000530378 DUX4L9Q6RFH8 374 aaPredicted RBP8.94□□□□□ -0.98
SOX6-213ENST00000530378 ZNF525Q8N782 197 aa8.94□□□□□ -0.98
SOX6-213ENST00000530378 CXorf56Q9H5V9 222 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms