RNA–Protein interactions for RNA: ENST00000528563.5

HIF3A-211, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2

Gene HIF3A, Length 1,486 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-211ENST00000528563 CEBPDP49716 269 aaPredicted RBP13.87□□□□□ -0.19
HIF3A-211ENST00000528563 BPIFB3P59826 476 aa13.87□□□□□ -0.19
HIF3A-211ENST00000528563 ASPHD2Q6ICH7 369 aa13.87□□□□□ -0.19
HIF3A-211ENST00000528563 C1orf122Q6ZSJ8 110 aa13.87□□□□□ -0.19
HIF3A-211ENST00000528563 PHC2Q8IXK0 858 aa13.87□□□□□ -0.19
HIF3A-211ENST00000528563 STX19Q8N4C7 294 aa13.87□□□□□ -0.19
HIF3A-211ENST00000528563 TMEM185AQ8NFB2 350 aa13.87□□□□□ -0.19
HIF3A-211ENST00000528563 SPATA3Q8NHX4 192 aa13.87□□□□□ -0.19
HIF3A-211ENST00000528563 TSEN15Q8WW01 171 aaKnown RBP13.87□□□□□ -0.19
HIF3A-211ENST00000528563 H1FXQ92522 213 aaKnown RBP13.87□□□□□ -0.19
HIF3A-211ENST00000528563 GHSRQ92847 366 aa13.87□□□□□ -0.19
HIF3A-211ENST00000528563 SMIM19Q96E16 107 aa13.87□□□□□ -0.19
HIF3A-211ENST00000528563 MS4A7Q9GZW8 240 aaPredicted RBP13.87□□□□□ -0.19
HIF3A-211ENST00000528563 ZNF281Q9Y2X9 895 aa13.87□□□□□ -0.19
HIF3A-211ENST00000528563 SOX21Q9Y651 276 aaPredicted RBP13.87□□□□□ -0.19
HIF3A-211ENST00000528563 TRAV40A0A0B4J280 105 aa13.86□□□□□ -0.19
HIF3A-211ENST00000528563 CENPVL3A0A0U1RRI6 287 aa13.86□□□□□ -0.19
HIF3A-211ENST00000528563 SLC1A7O00341 560 aa13.86□□□□□ -0.19
HIF3A-211ENST00000528563 SPRY1O43609 319 aaPredicted RBP13.86□□□□□ -0.19
HIF3A-211ENST00000528563 SULT1B1O43704 296 aa13.86□□□□□ -0.19
HIF3A-211ENST00000528563 MYF6P23409 242 aa13.86□□□□□ -0.19
HIF3A-211ENST00000528563 SOX2P48431 317 aa13.86□□□□□ -0.19
HIF3A-211ENST00000528563 PDCD1Q15116 288 aa13.86□□□□□ -0.19
HIF3A-211ENST00000528563 RNLSQ5VYX0 342 aa13.86□□□□□ -0.19
HIF3A-211ENST00000528563 Q8IYB0 196 aa13.86□□□□□ -0.19
HIF3A-211ENST00000528563 KIR3DL3Q8N743 410 aa13.86□□□□□ -0.19
HIF3A-211ENST00000528563 NANOGP1Q8N7R0 232 aa13.86□□□□□ -0.19
HIF3A-211ENST00000528563 ZFAND2BQ8WV99 257 aa13.86□□□□□ -0.19
HIF3A-211ENST00000528563 SPACA5Q96QH8 159 aa13.86□□□□□ -0.19
HIF3A-211ENST00000528563 VCX3BQ9H321 246 aa13.86□□□□□ -0.19
HIF3A-211ENST00000528563 ELL3Q9HB65 397 aaPredicted RBP13.86□□□□□ -0.19
HIF3A-211ENST00000528563 NEK6Q9HC98 313 aa13.86□□□□□ -0.19
HIF3A-211ENST00000528563 OR14J1Q9UGF5 321 aa13.86□□□□□ -0.19
HIF3A-211ENST00000528563 IGKV1-12A0A0C4DH73 117 aa13.85□□□□□ -0.19
HIF3A-211ENST00000528563 PTGES3LE9PB15 166 aa13.85□□□□□ -0.19
HIF3A-211ENST00000528563 K7N7A8 449 aa13.85□□□□□ -0.19
HIF3A-211ENST00000528563 CYB5AP00167 134 aa13.85□□□□□ -0.19
HIF3A-211ENST00000528563 IGKV1D-12P01611 117 aa13.85□□□□□ -0.19
HIF3A-211ENST00000528563 CDK1P06493 297 aa13.85□□□□□ -0.19
HIF3A-211ENST00000528563 OCM2P0CE71 109 aa13.85□□□□□ -0.19
HIF3A-211ENST00000528563 OCMP0CE72 109 aaPredicted RBP13.85□□□□□ -0.19
HIF3A-211ENST00000528563 POU3F4P49335 361 aa13.85□□□□□ -0.19
HIF3A-211ENST00000528563 DOC2BQ14184 412 aa13.85□□□□□ -0.19
HIF3A-211ENST00000528563 KISS1Q15726 138 aa13.85□□□□□ -0.19
HIF3A-211ENST00000528563 GPR157Q5UAW9 335 aa13.85□□□□□ -0.19
HIF3A-211ENST00000528563 SAXO1Q8IYX7 474 aa13.85□□□□□ -0.19
HIF3A-211ENST00000528563 FAM58AQ8N1B3 248 aa13.85□□□□□ -0.19
HIF3A-211ENST00000528563 Q8N7P7 452 aa13.85□□□□□ -0.19
HIF3A-211ENST00000528563 SIGLECL1Q8N7X8 197 aa13.85□□□□□ -0.19
HIF3A-211ENST00000528563 ZDHHC22Q8N966 263 aa13.85□□□□□ -0.19
HIF3A-211ENST00000528563 RFT1Q96AA3 541 aa13.85□□□□□ -0.19
HIF3A-211ENST00000528563 ZNF48Q96MX3 618 aaPredicted RBP13.85□□□□□ -0.19
HIF3A-211ENST00000528563 JMJD8Q96S16 334 aa13.85□□□□□ -0.19
HIF3A-211ENST00000528563 C19orf24Q9BVV8 132 aa13.85□□□□□ -0.19
HIF3A-211ENST00000528563 ANKRD60Q9BZ19 345 aa13.85□□□□□ -0.19
HIF3A-211ENST00000528563 FAM234AQ9H0X4 552 aa13.85□□□□□ -0.19
HIF3A-211ENST00000528563 ESM1Q9NQ30 184 aa13.85□□□□□ -0.19
HIF3A-211ENST00000528563 RBFOX1Q9NWB1 397 aaKnown RBP13.85□□□□□ -0.19
HIF3A-211ENST00000528563 TRBV23-1A0A0A0MS06 115 aa13.84□□□□□ -0.19
HIF3A-211ENST00000528563 ANGPTL7O43827 346 aa13.84□□□□□ -0.19
HIF3A-211ENST00000528563 ZNF737O75373 536 aa13.84□□□□□ -0.19
HIF3A-211ENST00000528563 TK1P04183 234 aa13.84□□□□□ -0.19
HIF3A-211ENST00000528563 CD2P06729 351 aa13.84□□□□□ -0.19
HIF3A-211ENST00000528563 CHRM2P08172 466 aa13.84□□□□□ -0.19
HIF3A-211ENST00000528563 BCL3P20749 454 aa13.84□□□□□ -0.19
HIF3A-211ENST00000528563 CAPZA1P52907 286 aa13.84□□□□□ -0.19
HIF3A-211ENST00000528563 RPS11P62280 158 aaKnown RBP eCLIP13.84□□□□□ -0.19
HIF3A-211ENST00000528563 BRD3OSQ6XYD6 125 aa13.84□□□□□ -0.19
HIF3A-211ENST00000528563 CMTM4Q8IZR5 234 aa13.84□□□□□ -0.19
HIF3A-211ENST00000528563 ZFP41Q8N8Y5 198 aa13.84□□□□□ -0.19
HIF3A-211ENST00000528563 TMEM106AQ96A25 262 aa13.84□□□□□ -0.19
HIF3A-211ENST00000528563 PGLYRP3Q96LB9 341 aa13.84□□□□□ -0.19
HIF3A-211ENST00000528563 CDCA4Q9BXL8 241 aa13.84□□□□□ -0.19
HIF3A-211ENST00000528563 PRDM13Q9H4Q3 707 aa13.84□□□□□ -0.19
HIF3A-211ENST00000528563 ONECUT1Q9UBC0 465 aa13.84□□□□□ -0.19
HIF3A-211ENST00000528563 IL36RNQ9UBH0 155 aa13.84□□□□□ -0.19
HIF3A-211ENST00000528563 TRBV5-5A0A0J9YX44 114 aa13.83□□□□□ -0.2
HIF3A-211ENST00000528563 KDM4BO94953 1096 aa13.83□□□□□ -0.2
HIF3A-211ENST00000528563 ATP6V1G2O95670 118 aa13.83□□□□□ -0.2
HIF3A-211ENST00000528563 RAB3AP20336 220 aa13.83□□□□□ -0.2
HIF3A-211ENST00000528563 WNT4P56705 351 aa13.83□□□□□ -0.2
HIF3A-211ENST00000528563 TAS2R43P59537 309 aa13.83□□□□□ -0.2
HIF3A-211ENST00000528563 ZP1P60852 638 aa13.83□□□□□ -0.2
HIF3A-211ENST00000528563 COL10A1Q03692 680 aa13.83□□□□□ -0.2
HIF3A-211ENST00000528563 ZNF146Q15072 292 aa13.83□□□□□ -0.2
HIF3A-211ENST00000528563 METAP1DQ6UB28 335 aaPredicted RBP13.83□□□□□ -0.2
HIF3A-211ENST00000528563 IZUMO2Q6UXV1 221 aa13.83□□□□□ -0.2
HIF3A-211ENST00000528563 RBMS3Q6XE24 437 aaKnown RBP13.83□□□□□ -0.2
HIF3A-211ENST00000528563 VMO1Q7Z5L0 202 aa13.83□□□□□ -0.2
HIF3A-211ENST00000528563 ZSCAN4Q8NAM6 433 aaPredicted RBP13.83□□□□□ -0.2
HIF3A-211ENST00000528563 OR51A2Q8NGJ7 313 aa13.83□□□□□ -0.2
HIF3A-211ENST00000528563 OR5D18Q8NGL1 313 aa13.83□□□□□ -0.2
HIF3A-211ENST00000528563 EMG1Q92979 244 aaKnown RBP13.83□□□□□ -0.2
HIF3A-211ENST00000528563 LHX4Q969G2 390 aa13.83□□□□□ -0.2
HIF3A-211ENST00000528563 MYDGFQ969H8 173 aa13.83□□□□□ -0.2
HIF3A-211ENST00000528563 DUSP21Q9H596 190 aa13.83□□□□□ -0.2
HIF3A-211ENST00000528563 UNKLQ9H9P5 680 aaKnown RBP13.83□□□□□ -0.2
HIF3A-211ENST00000528563 RHOFQ9HBH0 211 aa13.83□□□□□ -0.2
HIF3A-211ENST00000528563 HMG20AQ9NP66 347 aa13.83□□□□□ -0.2
HIF3A-211ENST00000528563 C19orf12Q9NSK7 152 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms