RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 K7N7A8 449 aa7.88□□□□□ -1.15
CHD7-208ENST00000528280 SYNGR1O43759 233 aa7.88□□□□□ -1.15
CHD7-208ENST00000528280 ALX3O95076 343 aa7.88□□□□□ -1.15
CHD7-208ENST00000528280 APOL3O95236 402 aa7.88□□□□□ -1.15
CHD7-208ENST00000528280 TK1P04183 234 aa7.88□□□□□ -1.15
CHD7-208ENST00000528280 DUX4L2P0CJ85 424 aa7.88□□□□□ -1.15
CHD7-208ENST00000528280 DUX4L3P0CJ86 424 aa7.88□□□□□ -1.15
CHD7-208ENST00000528280 DUX4L4P0CJ87 422 aa7.88□□□□□ -1.15
CHD7-208ENST00000528280 DUX4L5P0CJ88 424 aa7.88□□□□□ -1.15
CHD7-208ENST00000528280 DUX4L6P0CJ89 424 aa7.88□□□□□ -1.15
CHD7-208ENST00000528280 DUX4L7P0CJ90 424 aa7.88□□□□□ -1.15
CHD7-208ENST00000528280 ZNF19P17023 458 aa7.88□□□□□ -1.15
CHD7-208ENST00000528280 ATF1P18846 271 aa7.88□□□□□ -1.15
CHD7-208ENST00000528280 GBX2P52951 348 aaPredicted RBP7.88□□□□□ -1.15
CHD7-208ENST00000528280 MTCP1P56278 107 aa7.88□□□□□ -1.15
CHD7-208ENST00000528280 ERVK11-1P61568 191 aa7.88□□□□□ -1.15
CHD7-208ENST00000528280 MED21Q13503 144 aa7.88□□□□□ -1.15
CHD7-208ENST00000528280 LPCAT4Q643R3 524 aa7.88□□□□□ -1.15
CHD7-208ENST00000528280 RUSC1-AS1Q66K80 236 aa7.88□□□□□ -1.15
CHD7-208ENST00000528280 DUX4L9Q6RFH8 374 aaPredicted RBP7.88□□□□□ -1.15
CHD7-208ENST00000528280 LHFPL2Q6ZUX7 228 aa7.88□□□□□ -1.15
CHD7-208ENST00000528280 ANGPTL5Q86XS5 388 aa7.88□□□□□ -1.15
CHD7-208ENST00000528280 FAM185AQ8N0U4 392 aa7.88□□□□□ -1.15
CHD7-208ENST00000528280 CD177Q8N6Q3 437 aa7.88□□□□□ -1.15
CHD7-208ENST00000528280 Q8N7P7 452 aa7.88□□□□□ -1.15
CHD7-208ENST00000528280 OR5D14Q8NGL3 314 aa7.88□□□□□ -1.15
CHD7-208ENST00000528280 OR5R1Q8NH85 324 aa7.88□□□□□ -1.15
CHD7-208ENST00000528280 PPP1R35Q8TAP8 253 aa7.88□□□□□ -1.15
CHD7-208ENST00000528280 FGGYQ96C11 551 aa7.88□□□□□ -1.15
CHD7-208ENST00000528280 MRPS18AQ9NVS2 196 aaKnown RBP7.88□□□□□ -1.15
CHD7-208ENST00000528280 FAM118AQ9NWS6 357 aa7.88□□□□□ -1.15
CHD7-208ENST00000528280 FRRS1LQ9P0K9 344 aa7.88□□□□□ -1.15
CHD7-208ENST00000528280 DUX4Q9UBX2 424 aa7.88□□□□□ -1.15
CHD7-208ENST00000528280 PCDHGB5Q9Y5G0 923 aa7.88□□□□□ -1.15
CHD7-208ENST00000528280 SOX21Q9Y651 276 aaPredicted RBP7.88□□□□□ -1.15
CHD7-208ENST00000528280 A0A0U1RQK1 487 aa7.87□□□□□ -1.15
CHD7-208ENST00000528280 MDFIC2A0A1B0GVS7 189 aa7.87□□□□□ -1.15
CHD7-208ENST00000528280 LOC107986453A0A1B0GWG9 222 aa7.87□□□□□ -1.15
CHD7-208ENST00000528280 FUOMA2VDF0 154 aa7.87□□□□□ -1.15
CHD7-208ENST00000528280 RNASEK-C17orf49H0YIS7 233 aa7.87□□□□□ -1.15
CHD7-208ENST00000528280 H3BUI4 141 aa7.87□□□□□ -1.15
CHD7-208ENST00000528280 DENRO43583 198 aaKnown RBP7.87□□□□□ -1.15
CHD7-208ENST00000528280 RBP4P02753 201 aa7.87□□□□□ -1.15
CHD7-208ENST00000528280 MT-ND2P03891 347 aa7.87□□□□□ -1.15
CHD7-208ENST00000528280 CCDC159P0C7I6 412 aa7.87□□□□□ -1.15
CHD7-208ENST00000528280 DBTP11182 482 aaKnown RBP7.87□□□□□ -1.15
CHD7-208ENST00000528280 SELLP14151 372 aa7.87□□□□□ -1.15
CHD7-208ENST00000528280 TGFBR2P37173 567 aa7.87□□□□□ -1.15
CHD7-208ENST00000528280 LGALS4P56470 323 aa7.87□□□□□ -1.15
CHD7-208ENST00000528280 OR12D2P58182 307 aa7.87□□□□□ -1.15
CHD7-208ENST00000528280 ERVFRD-1P60508 538 aa7.87□□□□□ -1.15
CHD7-208ENST00000528280 MEF2CQ06413 473 aaPredicted RBP7.87□□□□□ -1.15
CHD7-208ENST00000528280 ALKBH1Q13686 389 aaKnown RBP7.87□□□□□ -1.15
CHD7-208ENST00000528280 AANATQ16613 207 aa7.87□□□□□ -1.15
CHD7-208ENST00000528280 DMRTC1Q5HYR2 192 aa7.87□□□□□ -1.15
CHD7-208ENST00000528280 TTC23Q5W5X9 447 aa7.87□□□□□ -1.15
CHD7-208ENST00000528280 TMEM200BQ69YZ2 307 aa7.87□□□□□ -1.15
CHD7-208ENST00000528280 SLC25A26Q70HW3 274 aa7.87□□□□□ -1.15
CHD7-208ENST00000528280 GDPD3Q7L5L3 318 aa7.87□□□□□ -1.15
CHD7-208ENST00000528280 LHFPL3Q86UP9 236 aa7.87□□□□□ -1.15
CHD7-208ENST00000528280 SERPINA12Q8IW75 414 aa7.87□□□□□ -1.15
CHD7-208ENST00000528280 RDH10Q8IZV5 341 aa7.87□□□□□ -1.15
CHD7-208ENST00000528280 FGFRL1Q8N441 504 aa7.87□□□□□ -1.15
CHD7-208ENST00000528280 PIP4P2Q8N4L2 257 aa7.87□□□□□ -1.15
CHD7-208ENST00000528280 ZNF676Q8N7Q3 588 aa7.87□□□□□ -1.15
CHD7-208ENST00000528280 TRMT10AQ8TBZ6 339 aaKnown RBP7.87□□□□□ -1.15
CHD7-208ENST00000528280 TNFRSF14Q92956 283 aa7.87□□□□□ -1.15
CHD7-208ENST00000528280 LGALS12Q96DT0 336 aa7.87□□□□□ -1.15
CHD7-208ENST00000528280 CPNE2Q96FN4 548 aaPredicted RBP7.87□□□□□ -1.15
CHD7-208ENST00000528280 SNX22Q96L94 193 aa7.87□□□□□ -1.15
CHD7-208ENST00000528280 ZNF488Q96MN9 340 aa7.87□□□□□ -1.15
CHD7-208ENST00000528280 MBOAT4Q96T53 435 aa7.87□□□□□ -1.15
CHD7-208ENST00000528280 CHIAQ9BZP6 476 aa7.87□□□□□ -1.15
CHD7-208ENST00000528280 COMMD4Q9H0A8 199 aa7.87□□□□□ -1.15
CHD7-208ENST00000528280 ZNF696Q9H7X3 374 aa7.87□□□□□ -1.15
CHD7-208ENST00000528280 SIRT7Q9NRC8 400 aa7.87□□□□□ -1.15
CHD7-208ENST00000528280 MTCH1Q9NZJ7 389 aa7.87□□□□□ -1.15
CHD7-208ENST00000528280 NDUFA13Q9P0J0 144 aa7.87□□□□□ -1.15
CHD7-208ENST00000528280 OR14J1Q9UGF5 321 aa7.87□□□□□ -1.15
CHD7-208ENST00000528280 MEIOCA2RUB1 952 aa7.86□□□□□ -1.15
CHD7-208ENST00000528280 CLPSL1A2RUU4 121 aa7.86□□□□□ -1.15
CHD7-208ENST00000528280 TMEM212A6NML5 194 aa7.86□□□□□ -1.15
CHD7-208ENST00000528280 SH2D1BO14796 132 aa7.86□□□□□ -1.15
CHD7-208ENST00000528280 IGHA1P01876 353 aa7.86□□□□□ -1.15
CHD7-208ENST00000528280 GABRB1P18505 474 aa7.86□□□□□ -1.15
CHD7-208ENST00000528280 PEX2P28328 305 aa7.86□□□□□ -1.15
CHD7-208ENST00000528280 KIR3DL2P43630 455 aa7.86□□□□□ -1.15
CHD7-208ENST00000528280 BMXP51813 675 aa7.86□□□□□ -1.15
CHD7-208ENST00000528280 RAG2P55895 527 aa7.86□□□□□ -1.15
CHD7-208ENST00000528280 ZNF91Q05481 1191 aa7.86□□□□□ -1.15
CHD7-208ENST00000528280 CCDC58Q4VC31 144 aa7.86□□□□□ -1.15
CHD7-208ENST00000528280 SPIN3Q5JUX0 258 aa7.86□□□□□ -1.15
CHD7-208ENST00000528280 TMPRSS11AQ6ZMR5 421 aa7.86□□□□□ -1.15
CHD7-208ENST00000528280 C17orf107Q6ZR85 190 aa7.86□□□□□ -1.15
CHD7-208ENST00000528280 PDZD9Q8IXQ8 264 aa7.86□□□□□ -1.15
CHD7-208ENST00000528280 SAXO1Q8IYX7 474 aa7.86□□□□□ -1.15
CHD7-208ENST00000528280 FAM58AQ8N1B3 248 aa7.86□□□□□ -1.15
CHD7-208ENST00000528280 PACRGLQ8N7B6 248 aa7.86□□□□□ -1.15
CHD7-208ENST00000528280 BEND2Q8NDZ0 799 aa7.86□□□□□ -1.15
CHD7-208ENST00000528280 OR13C3Q8NGS6 347 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms