RNA–Protein interactions for RNA: ENST00000526913.5

KNL1-203, Transcript of kinetochore scaffold 1, humanhuman

TSL 1 (best)

Gene KNL1, Length 5,584 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-203ENST00000526913 CDK5Q00535 292 aa0.96□□□□□ -2.26
KNL1-203ENST00000526913 WDR74Q6RFH5 385 aaPredicted RBP0.96□□□□□ -2.26
KNL1-203ENST00000526913 ARL9Q6T311 187 aa0.96□□□□□ -2.26
KNL1-203ENST00000526913 CLEC20AQ6ZU45 233 aa0.96□□□□□ -2.26
KNL1-203ENST00000526913 CBR4Q8N4T8 237 aa0.96□□□□□ -2.26
KNL1-203ENST00000526913 YIPF7Q8N8F6 280 aa0.96□□□□□ -2.26
KNL1-203ENST00000526913 OR5L1Q8NGL2 311 aa0.96□□□□□ -2.26
KNL1-203ENST00000526913 OR2G3Q8NGZ4 309 aa0.96□□□□□ -2.26
KNL1-203ENST00000526913 LINC00477Q96M19 166 aa0.96□□□□□ -2.26
KNL1-203ENST00000526913 MAGEB18Q96M61 343 aa0.96□□□□□ -2.26
KNL1-203ENST00000526913 TSNAXQ99598 290 aaKnown RBP0.96□□□□□ -2.26
KNL1-203ENST00000526913 INIPQ9NRY2 104 aa0.96□□□□□ -2.26
KNL1-203ENST00000526913 IL17CQ9P0M4 197 aa0.96□□□□□ -2.26
KNL1-203ENST00000526913 RGPD1P0DJD0 1748 aa0.96□□□□□ -2.26
KNL1-203ENST00000526913 PLXNB1O43157 2135 aa0.96□□□□□ -2.26
KNL1-203ENST00000526913 ZNF462Q96JM2 2506 aa0.96□□□□□ -2.26
KNL1-203ENST00000526913 LOC102724200A0A096LPH7 203 aaPredicted RBP0.95□□□□□ -2.26
KNL1-203ENST00000526913 TRAV8-6A0A0B4J262 113 aa0.95□□□□□ -2.26
KNL1-203ENST00000526913 CEACAM18A8MTB9 384 aa0.95□□□□□ -2.26
KNL1-203ENST00000526913 MAGEB4O15481 346 aaPredicted RBP0.95□□□□□ -2.26
KNL1-203ENST00000526913 RAD1O60671 282 aa0.95□□□□□ -2.26
KNL1-203ENST00000526913 RAB5AP20339 215 aa0.95□□□□□ -2.26
KNL1-203ENST00000526913 LHX2P50458 406 aa0.95□□□□□ -2.26
KNL1-203ENST00000526913 AP1S2P56377 157 aa0.95□□□□□ -2.26
KNL1-203ENST00000526913 RAB38P57729 211 aa0.95□□□□□ -2.26
KNL1-203ENST00000526913 ZNF45Q02386 682 aa0.95□□□□□ -2.26
KNL1-203ENST00000526913 PNOCQ13519 176 aa0.95□□□□□ -2.26
KNL1-203ENST00000526913 PDK2Q15119 407 aa0.95□□□□□ -2.26
KNL1-203ENST00000526913 RFX4Q33E94 735 aa0.95□□□□□ -2.26
KNL1-203ENST00000526913 ALKAL1Q6UXT8 129 aa0.95□□□□□ -2.26
KNL1-203ENST00000526913 SSX6Q7RTT6 188 aa0.95□□□□□ -2.26
KNL1-203ENST00000526913 DEFB123Q8N688 67 aa0.95□□□□□ -2.26
KNL1-203ENST00000526913 ZNF433Q8N7K0 673 aaPredicted RBP0.95□□□□□ -2.26
KNL1-203ENST00000526913 MAPK1IP1LQ8NDC0 245 aa0.95□□□□□ -2.26
KNL1-203ENST00000526913 MCOLN3Q8TDD5 553 aa0.95□□□□□ -2.26
KNL1-203ENST00000526913 ACTRT1Q8TDG2 376 aa0.95□□□□□ -2.26
KNL1-203ENST00000526913 CPNE4Q96A23 557 aaPredicted RBP0.95□□□□□ -2.26
KNL1-203ENST00000526913 SMIM19Q96E16 107 aa0.95□□□□□ -2.26
KNL1-203ENST00000526913 DNAJC1Q96KC8 554 aaKnown RBP0.95□□□□□ -2.26
KNL1-203ENST00000526913 Q96MT0 163 aa0.95□□□□□ -2.26
KNL1-203ENST00000526913 OR4K3Q96R72 315 aa0.95□□□□□ -2.26
KNL1-203ENST00000526913 METTL26Q96S19 204 aa0.95□□□□□ -2.26
KNL1-203ENST00000526913 PAXXQ9BUH6 204 aa0.95□□□□□ -2.26
KNL1-203ENST00000526913 COA1Q9GZY4 146 aa0.95□□□□□ -2.26
KNL1-203ENST00000526913 ING2Q9H160 280 aa0.95□□□□□ -2.26
KNL1-203ENST00000526913 LRRC19Q9H756 370 aa0.95□□□□□ -2.26
KNL1-203ENST00000526913 C8orf17Q9NRJ1 99 aa0.95□□□□□ -2.26
KNL1-203ENST00000526913 NKIRAS1Q9NYS0 192 aa0.95□□□□□ -2.26
KNL1-203ENST00000526913 PRELID1Q9Y255 219 aa0.95□□□□□ -2.26
KNL1-203ENST00000526913 KCNE3Q9Y6H6 103 aa0.95□□□□□ -2.26
KNL1-203ENST00000526913 UNC13BO14795 1591 aa0.95□□□□□ -2.26
KNL1-203ENST00000526913 PHLPP1O60346 1717 aa0.95□□□□□ -2.26
KNL1-203ENST00000526913 LAMA1P25391 3075 aa0.95□□□□□ -2.26
KNL1-203ENST00000526913 SCN10AQ9Y5Y9 1956 aa0.95□□□□□ -2.26
KNL1-203ENST00000526913 CUX1P39880 1505 aa0.95□□□□□ -2.26
KNL1-203ENST00000526913 GPATCH8Q9UKJ3 1502 aaKnown RBP0.95□□□□□ -2.26
KNL1-203ENST00000526913 SYNMO15061 1565 aa0.95□□□□□ -2.26
KNL1-203ENST00000526913 CXCR6O00574 342 aa0.95□□□□□ -2.26
KNL1-203ENST00000526913 TBL1XO60907 577 aa0.95□□□□□ -2.26
KNL1-203ENST00000526913 CXCR1P25024 350 aa0.95□□□□□ -2.26
KNL1-203ENST00000526913 ERFP50548 548 aa0.95□□□□□ -2.26
KNL1-203ENST00000526913 CRADDP78560 199 aa0.95□□□□□ -2.26
KNL1-203ENST00000526913 MEF2CQ06413 473 aaPredicted RBP0.95□□□□□ -2.26
KNL1-203ENST00000526913 BAXQ07812 192 aa0.95□□□□□ -2.26
KNL1-203ENST00000526913 FLOT2Q14254 428 aa0.95□□□□□ -2.26
KNL1-203ENST00000526913 PRR30Q53SZ7 412 aaPredicted RBP0.95□□□□□ -2.26
KNL1-203ENST00000526913 KCTD16Q68DU8 428 aa0.95□□□□□ -2.26
KNL1-203ENST00000526913 FAM45BPQ6NSW5 357 aa0.95□□□□□ -2.26
KNL1-203ENST00000526913 C2orf66Q6UXQ4 117 aa0.95□□□□□ -2.26
KNL1-203ENST00000526913 GDPD3Q7L5L3 318 aa0.95□□□□□ -2.26
KNL1-203ENST00000526913 LINC01551Q86U37 167 aa0.95□□□□□ -2.26
KNL1-203ENST00000526913 NPBQ8NG41 125 aa0.95□□□□□ -2.26
KNL1-203ENST00000526913 ZNF420Q8TAQ5 688 aaPredicted RBP0.95□□□□□ -2.26
KNL1-203ENST00000526913 CIRBP-AS1Q8TBR5 109 aa0.95□□□□□ -2.26
KNL1-203ENST00000526913 SLC37A2Q8TED4 501 aa0.95□□□□□ -2.26
KNL1-203ENST00000526913 FAM222BQ8WU58 562 aa0.95□□□□□ -2.26
KNL1-203ENST00000526913 BLNKQ8WV28 456 aa0.95□□□□□ -2.26
KNL1-203ENST00000526913 TMEM101Q96IK0 257 aa0.95□□□□□ -2.26
KNL1-203ENST00000526913 ZNF414Q96IQ9 312 aa0.95□□□□□ -2.26
KNL1-203ENST00000526913 PRAP1Q96NZ9 151 aa0.95□□□□□ -2.26
KNL1-203ENST00000526913 HIST1H4GQ99525 98 aa0.95□□□□□ -2.26
KNL1-203ENST00000526913 VCX3AQ9NNX9 186 aa0.95□□□□□ -2.26
KNL1-203ENST00000526913 CMTM6Q9NX76 183 aa0.95□□□□□ -2.26
KNL1-203ENST00000526913 ACOT9Q9Y305 439 aa0.95□□□□□ -2.26
KNL1-203ENST00000526913 PKD1P98161 4303 aa0.95□□□□□ -2.26
KNL1-203ENST00000526913 ROBO1Q9Y6N7 1651 aa0.95□□□□□ -2.26
KNL1-203ENST00000526913 DSCAMO60469 2012 aa0.95□□□□□ -2.26
KNL1-203ENST00000526913 KMT2EQ8IZD2 1858 aa0.95□□□□□ -2.26
KNL1-203ENST00000526913 LRRIQ1Q96JM4 1722 aa0.95□□□□□ -2.26
KNL1-203ENST00000526913 DOCK9Q9BZ29 2069 aa0.95□□□□□ -2.26
KNL1-203ENST00000526913 PLCH2O75038 1416 aa0.95□□□□□ -2.26
KNL1-203ENST00000526913 CNTLNQ9NXG0 1405 aa0.95□□□□□ -2.26
KNL1-203ENST00000526913 TENM1Q9UKZ4 2725 aa0.95□□□□□ -2.26
KNL1-203ENST00000526913 KLLNB2CW77 178 aa0.95□□□□□ -2.26
KNL1-203ENST00000526913 DNASE2O00115 360 aaPredicted RBP0.95□□□□□ -2.26
KNL1-203ENST00000526913 NDUFS5O43920 106 aa0.95□□□□□ -2.26
KNL1-203ENST00000526913 SS18L1O75177 396 aaPredicted RBP0.95□□□□□ -2.26
KNL1-203ENST00000526913 RAB3BP20337 219 aa0.95□□□□□ -2.26
KNL1-203ENST00000526913 IL3RAP26951 378 aa0.95□□□□□ -2.26
KNL1-203ENST00000526913 HNRNPA0Q13151 305 aaKnown RBP0.95□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms