RNA–Protein interactions for RNA: ENST00000526468.1

CAPN1-204, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 690 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-204ENST00000526468 SRSF4Q08170 494 aaKnown RBP9.78□□□□□ -0.84
CAPN1-204ENST00000526468 LIPKQ5VXJ0 399 aa9.78□□□□□ -0.84
CAPN1-204ENST00000526468 C22orf42Q6IC83 251 aa9.78□□□□□ -0.84
CAPN1-204ENST00000526468 RPL13AP3Q6NVV1 102 aa9.78□□□□□ -0.84
CAPN1-204ENST00000526468 FIP1L1Q6UN15 594 aaKnown RBP9.78□□□□□ -0.84
CAPN1-204ENST00000526468 MBOAT2Q6ZWT7 520 aa9.78□□□□□ -0.84
CAPN1-204ENST00000526468 FAM122BQ7Z309 247 aa9.78□□□□□ -0.84
CAPN1-204ENST00000526468 OR52I1Q8NGK6 324 aa9.78□□□□□ -0.84
CAPN1-204ENST00000526468 OR11L1Q8NGX0 322 aa9.78□□□□□ -0.84
CAPN1-204ENST00000526468 SLC7A13Q8TCU3 470 aa9.78□□□□□ -0.84
CAPN1-204ENST00000526468 DACT3Q96B18 629 aaPredicted RBP9.78□□□□□ -0.84
CAPN1-204ENST00000526468 PCGF1Q9BSM1 259 aa9.78□□□□□ -0.84
CAPN1-204ENST00000526468 GPN1Q9HCN4 374 aaPredicted RBP9.78□□□□□ -0.84
CAPN1-204ENST00000526468 NLKQ9UBE8 527 aa9.78□□□□□ -0.84
CAPN1-204ENST00000526468 SLC23A1Q9UHI7 598 aa9.78□□□□□ -0.84
CAPN1-204ENST00000526468 TMEM5Q9Y2B1 443 aa9.78□□□□□ -0.84
CAPN1-204ENST00000526468 COA3Q9Y2R0 106 aaPredicted RBP9.78□□□□□ -0.84
CAPN1-204ENST00000526468 BOLA1Q9Y3E2 137 aa9.78□□□□□ -0.84
CAPN1-204ENST00000526468 MMP24Q9Y5R2 645 aa9.78□□□□□ -0.84
CAPN1-204ENST00000526468 A0A087WUU8 490 aa9.77□□□□□ -0.85
CAPN1-204ENST00000526468 A0A1B0GUS0 222 aa9.77□□□□□ -0.85
CAPN1-204ENST00000526468 RPS10-NUDT3A0A1W2PQS6 291 aa9.77□□□□□ -0.85
CAPN1-204ENST00000526468 IQCF6A8MYZ5 107 aa9.77□□□□□ -0.85
CAPN1-204ENST00000526468 C22orf46C9J442 243 aa9.77□□□□□ -0.85
CAPN1-204ENST00000526468 TOR1AO14656 332 aa9.77□□□□□ -0.85
CAPN1-204ENST00000526468 IMPA2O14732 288 aa9.77□□□□□ -0.85
CAPN1-204ENST00000526468 FABP7O15540 132 aa9.77□□□□□ -0.85
CAPN1-204ENST00000526468 OR10H3O60404 316 aa9.77□□□□□ -0.85
CAPN1-204ENST00000526468 B3GALNT1O75752 331 aa9.77□□□□□ -0.85
CAPN1-204ENST00000526468 NDUFB2O95178 105 aa9.77□□□□□ -0.85
CAPN1-204ENST00000526468 GIPP09681 153 aaPredicted RBP9.77□□□□□ -0.85
CAPN1-204ENST00000526468 SULT1A3P0DMM9 295 aa9.77□□□□□ -0.85
CAPN1-204ENST00000526468 SULT1A4P0DMN0 295 aa9.77□□□□□ -0.85
CAPN1-204ENST00000526468 ATF4P18848 351 aaPredicted RBP9.77□□□□□ -0.85
CAPN1-204ENST00000526468 CPT2P23786 658 aa9.77□□□□□ -0.85
CAPN1-204ENST00000526468 FPR3P25089 353 aa9.77□□□□□ -0.85
CAPN1-204ENST00000526468 LSM6P62312 80 aaKnown RBP9.77□□□□□ -0.85
CAPN1-204ENST00000526468 SNAPC1Q16533 368 aa9.77□□□□□ -0.85
CAPN1-204ENST00000526468 MEP1BQ16820 701 aa9.77□□□□□ -0.85
CAPN1-204ENST00000526468 PRAMEF6Q5VXH4 476 aa9.77□□□□□ -0.85
CAPN1-204ENST00000526468 DNM1P34Q6PK57 102 aa9.77□□□□□ -0.85
CAPN1-204ENST00000526468 CORO6Q6QEF8 472 aa9.77□□□□□ -0.85
CAPN1-204ENST00000526468 PGAP1Q75T13 922 aa9.77□□□□□ -0.85
CAPN1-204ENST00000526468 BTN2A1Q7KYR7 527 aa9.77□□□□□ -0.85
CAPN1-204ENST00000526468 RNF113BQ8IZP6 322 aaKnown RBP9.77□□□□□ -0.85
CAPN1-204ENST00000526468 STPG2Q8N412 459 aa9.77□□□□□ -0.85
CAPN1-204ENST00000526468 KIR3DL3Q8N743 410 aa9.77□□□□□ -0.85
CAPN1-204ENST00000526468 OR4M1Q8NGD0 313 aa9.77□□□□□ -0.85
CAPN1-204ENST00000526468 GIMAP1Q8WWP7 306 aa9.77□□□□□ -0.85
CAPN1-204ENST00000526468 IL4I1Q96RQ9 567 aa9.77□□□□□ -0.85
CAPN1-204ENST00000526468 ATF6BQ99941 703 aa9.77□□□□□ -0.85
CAPN1-204ENST00000526468 HCAR1Q9BXC0 346 aa9.77□□□□□ -0.85
CAPN1-204ENST00000526468 CHIAQ9BZP6 476 aa9.77□□□□□ -0.85
CAPN1-204ENST00000526468 ABCG5Q9H222 651 aa9.77□□□□□ -0.85
CAPN1-204ENST00000526468 PPIL3Q9H2H8 161 aaKnown RBP9.77□□□□□ -0.85
CAPN1-204ENST00000526468 GHITMQ9H3K2 345 aa9.77□□□□□ -0.85
CAPN1-204ENST00000526468 BEX1Q9HBH7 125 aa9.77□□□□□ -0.85
CAPN1-204ENST00000526468 AMBNQ9NP70 447 aa9.77□□□□□ -0.85
CAPN1-204ENST00000526468 TRIM36Q9NQ86 728 aa9.77□□□□□ -0.85
CAPN1-204ENST00000526468 SF3B6Q9Y3B4 125 aaKnown RBP9.77□□□□□ -0.85
CAPN1-204ENST00000526468 A0A0G2JK05 382 aa9.76□□□□□ -0.85
CAPN1-204ENST00000526468 M0QZ24 198 aa9.76□□□□□ -0.85
CAPN1-204ENST00000526468 SFTPBP07988 381 aa9.76□□□□□ -0.85
CAPN1-204ENST00000526468 BLVRAP53004 296 aa9.76□□□□□ -0.85
CAPN1-204ENST00000526468 GMFBP60983 142 aa9.76□□□□□ -0.85
CAPN1-204ENST00000526468 ACTC1P68032 377 aa9.76□□□□□ -0.85
CAPN1-204ENST00000526468 ACTA1P68133 377 aa9.76□□□□□ -0.85
CAPN1-204ENST00000526468 CDK5Q00535 292 aa9.76□□□□□ -0.85
CAPN1-204ENST00000526468 WDR25Q64LD2 544 aaPredicted RBP9.76□□□□□ -0.85
CAPN1-204ENST00000526468 OLFML2AQ68BL7 652 aa9.76□□□□□ -0.85
CAPN1-204ENST00000526468 LIN54Q6MZP7 749 aa9.76□□□□□ -0.85
CAPN1-204ENST00000526468 TMEM65Q6PI78 240 aa9.76□□□□□ -0.85
CAPN1-204ENST00000526468 LYPD2Q6UXB3 125 aa9.76□□□□□ -0.85
CAPN1-204ENST00000526468 LINC00346Q8IVM7 164 aa9.76□□□□□ -0.85
CAPN1-204ENST00000526468 OR6V1Q8N148 313 aa9.76□□□□□ -0.85
CAPN1-204ENST00000526468 MS4A15Q8N5U1 240 aa9.76□□□□□ -0.85
CAPN1-204ENST00000526468 BOLLQ8N9W6 283 aaKnown RBP9.76□□□□□ -0.85
CAPN1-204ENST00000526468 OR9Q2Q8NGE9 314 aa9.76□□□□□ -0.85
CAPN1-204ENST00000526468 FANK1Q8TC84 345 aa9.76□□□□□ -0.85
CAPN1-204ENST00000526468 GNPDA2Q8TDQ7 276 aa9.76□□□□□ -0.85
CAPN1-204ENST00000526468 UBE2FQ969M7 185 aa9.76□□□□□ -0.85
CAPN1-204ENST00000526468 RNF167Q9H6Y7 350 aa9.76□□□□□ -0.85
CAPN1-204ENST00000526468 UFSP2Q9NUQ7 469 aa9.76□□□□□ -0.85
CAPN1-204ENST00000526468 TMEM100Q9NV29 134 aa9.76□□□□□ -0.85
CAPN1-204ENST00000526468 VSX1Q9NZR4 365 aaPredicted RBP9.76□□□□□ -0.85
CAPN1-204ENST00000526468 EXTL2Q9UBQ6 330 aa9.76□□□□□ -0.85
CAPN1-204ENST00000526468 PRELID3BQ9Y3B1 194 aa9.76□□□□□ -0.85
CAPN1-204ENST00000526468 LHFPL6Q9Y693 200 aa9.76□□□□□ -0.85
CAPN1-204ENST00000526468 DSCAML1Q8TD84 2053 aa9.75□□□□□ -0.85
CAPN1-204ENST00000526468 NOTCH3Q9UM47 2321 aa9.75□□□□□ -0.85
CAPN1-204ENST00000526468 KIR2DS1A0A191URI9 304 aa9.75□□□□□ -0.85
CAPN1-204ENST00000526468 SNRPGP15A8MWD9 76 aa9.75□□□□□ -0.85
CAPN1-204ENST00000526468 NUDT19A8MXV4 375 aa9.75□□□□□ -0.85
CAPN1-204ENST00000526468 SULT1B1O43704 296 aa9.75□□□□□ -0.85
CAPN1-204ENST00000526468 PPP1R3DO95685 299 aa9.75□□□□□ -0.85
CAPN1-204ENST00000526468 IGHA1P01876 353 aa9.75□□□□□ -0.85
CAPN1-204ENST00000526468 CD1AP06126 327 aa9.75□□□□□ -0.85
CAPN1-204ENST00000526468 MELTFP08582 738 aa9.75□□□□□ -0.85
CAPN1-204ENST00000526468 FAUP35544 74 aaKnown RBP9.75□□□□□ -0.85
CAPN1-204ENST00000526468 CFHR2P36980 270 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms