RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 BLNKQ8WV28 456 aa2.83□□□□□ -1.96
CSDE1-211ENST00000525970 CCL17Q92583 94 aa2.83□□□□□ -1.96
CSDE1-211ENST00000525970 CCDC127Q96BQ5 260 aa2.83□□□□□ -1.96
CSDE1-211ENST00000525970 LINC00167Q96N53 147 aa2.83□□□□□ -1.96
CSDE1-211ENST00000525970 FAM210AQ96ND0 272 aa2.83□□□□□ -1.96
CSDE1-211ENST00000525970 OR2M4Q96R27 311 aa2.83□□□□□ -1.96
CSDE1-211ENST00000525970 C7orf50Q9BRJ6 194 aaKnown RBP2.83□□□□□ -1.96
CSDE1-211ENST00000525970 DSN1Q9H410 356 aa2.83□□□□□ -1.96
CSDE1-211ENST00000525970 PSMD13Q9UNM6 376 aa2.83□□□□□ -1.96
CSDE1-211ENST00000525970 KLF13Q9Y2Y9 288 aaPredicted RBP2.83□□□□□ -1.96
CSDE1-211ENST00000525970 MIA3Q5JRA6 1907 aa2.83□□□□□ -1.96
CSDE1-211ENST00000525970 NUP214P35658 2090 aaPredicted RBP2.83□□□□□ -1.96
CSDE1-211ENST00000525970 LOXHD1Q8IVV2 1947 aa2.82□□□□□ -1.96
CSDE1-211ENST00000525970 GOLGA8IPA6NC78 632 aa2.82□□□□□ -1.96
CSDE1-211ENST00000525970 RBFOX3A6NFN3 312 aa2.82□□□□□ -1.96
CSDE1-211ENST00000525970 FFAR1O14842 300 aa2.82□□□□□ -1.96
CSDE1-211ENST00000525970 UBDO15205 165 aa2.82□□□□□ -1.96
CSDE1-211ENST00000525970 FGF16O43320 207 aa2.82□□□□□ -1.96
CSDE1-211ENST00000525970 MPZL2O60487 215 aa2.82□□□□□ -1.96
CSDE1-211ENST00000525970 PLIN3O60664 434 aa2.82□□□□□ -1.96
CSDE1-211ENST00000525970 GATBO75879 557 aaKnown RBP2.82□□□□□ -1.96
CSDE1-211ENST00000525970 RLN2P04090 185 aa2.82□□□□□ -1.96
CSDE1-211ENST00000525970 OR4Q2P0C623 313 aa2.82□□□□□ -1.96
CSDE1-211ENST00000525970 ZNF3P17036 446 aa2.82□□□□□ -1.96
CSDE1-211ENST00000525970 MAGP20916 626 aa2.82□□□□□ -1.96
CSDE1-211ENST00000525970 ANP32AP39687 249 aaKnown RBP2.82□□□□□ -1.96
CSDE1-211ENST00000525970 OPRK1P41145 380 aa2.82□□□□□ -1.96
CSDE1-211ENST00000525970 LGALS7P47929 136 aa2.82□□□□□ -1.96
CSDE1-211ENST00000525970 RPL14P50914 215 aaKnown RBP2.82□□□□□ -1.96
CSDE1-211ENST00000525970 STC1P52823 247 aa2.82□□□□□ -1.96
CSDE1-211ENST00000525970 PPP1CAP62136 330 aa2.82□□□□□ -1.96
CSDE1-211ENST00000525970 ZNHIT3Q15649 155 aaPredicted RBP2.82□□□□□ -1.96
CSDE1-211ENST00000525970 EXOC3L4Q17RC7 722 aa2.82□□□□□ -1.96
CSDE1-211ENST00000525970 ZNF404Q494X3 552 aa2.82□□□□□ -1.96
CSDE1-211ENST00000525970 ZNF684Q5T5D7 378 aa2.82□□□□□ -1.96
CSDE1-211ENST00000525970 LCE1CQ5T751 118 aa2.82□□□□□ -1.96
CSDE1-211ENST00000525970 LCE1BQ5T7P3 118 aa2.82□□□□□ -1.96
CSDE1-211ENST00000525970 UGT2A3Q6UWM9 527 aa2.82□□□□□ -1.96
CSDE1-211ENST00000525970 TPGS1Q6ZTW0 290 aa2.82□□□□□ -1.96
CSDE1-211ENST00000525970 TMEM256Q8N2U0 113 aa2.82□□□□□ -1.96
CSDE1-211ENST00000525970 ZNF461Q8TAF7 563 aa2.82□□□□□ -1.96
CSDE1-211ENST00000525970 NELFBQ8WX92 580 aa2.82□□□□□ -1.96
CSDE1-211ENST00000525970 SMIM8Q96KF7 97 aa2.82□□□□□ -1.96
CSDE1-211ENST00000525970 APOL4Q9BPW4 351 aa2.82□□□□□ -1.96
CSDE1-211ENST00000525970 NDFIP1Q9BT67 221 aa2.82□□□□□ -1.96
CSDE1-211ENST00000525970 CHCHD7Q9BUK0 85 aa2.82□□□□□ -1.96
CSDE1-211ENST00000525970 ASB7Q9H672 318 aa2.82□□□□□ -1.96
CSDE1-211ENST00000525970 ZNF430Q9H8G1 570 aaPredicted RBP2.82□□□□□ -1.96
CSDE1-211ENST00000525970 DIABLOQ9NR28 239 aa2.82□□□□□ -1.96
CSDE1-211ENST00000525970 PRO0461Q9UI25 63 aa2.82□□□□□ -1.96
CSDE1-211ENST00000525970 RAB22AQ9UL26 194 aa2.82□□□□□ -1.96
CSDE1-211ENST00000525970 ENPP4Q9Y6X5 453 aa2.82□□□□□ -1.96
CSDE1-211ENST00000525970 COL27A1Q8IZC6 1860 aaPredicted RBP2.82□□□□□ -1.96
CSDE1-211ENST00000525970 TMEM72A0PK05 275 aa2.81□□□□□ -1.96
CSDE1-211ENST00000525970 GOLGA6L10A6NI86 522 aa2.81□□□□□ -1.96
CSDE1-211ENST00000525970 PRAMEF26H0Y7S4 382 aa2.81□□□□□ -1.96
CSDE1-211ENST00000525970 CYTH3O43739 400 aa2.81□□□□□ -1.96
CSDE1-211ENST00000525970 FOXH1O75593 365 aa2.81□□□□□ -1.96
CSDE1-211ENST00000525970 ADAP1O75689 374 aa2.81□□□□□ -1.96
CSDE1-211ENST00000525970 DHRS3O75911 302 aa2.81□□□□□ -1.96
CSDE1-211ENST00000525970 C1GALT1C1LP0DN25 315 aa2.81□□□□□ -1.96
CSDE1-211ENST00000525970 SLC18A1P54219 525 aa2.81□□□□□ -1.96
CSDE1-211ENST00000525970 RPL10AP62906 217 aaKnown RBP2.81□□□□□ -1.96
CSDE1-211ENST00000525970 UBE2IP63279 158 aaKnown RBP2.81□□□□□ -1.96
CSDE1-211ENST00000525970 ADIGQ0VDE8 80 aa2.81□□□□□ -1.96
CSDE1-211ENST00000525970 YIF1BQ5BJH7 314 aa2.81□□□□□ -1.96
CSDE1-211ENST00000525970 CCDC122Q5T0U0 273 aa2.81□□□□□ -1.96
CSDE1-211ENST00000525970 KCTD16Q68DU8 428 aa2.81□□□□□ -1.96
CSDE1-211ENST00000525970 Q6P435 159 aa2.81□□□□□ -1.96
CSDE1-211ENST00000525970 ZFP2Q6ZN57 461 aa2.81□□□□□ -1.96
CSDE1-211ENST00000525970 CYP4Z2PQ8N1L4 340 aa2.81□□□□□ -1.96
CSDE1-211ENST00000525970 OR5T1Q8NG75 326 aa2.81□□□□□ -1.96
CSDE1-211ENST00000525970 UBALD1Q8TB05 177 aa2.81□□□□□ -1.96
CSDE1-211ENST00000525970 LINC01560Q8TB33 94 aa2.81□□□□□ -1.96
CSDE1-211ENST00000525970 DNAJB3Q8WWF6 145 aa2.81□□□□□ -1.96
CSDE1-211ENST00000525970 CPNE4Q96A23 557 aaPredicted RBP2.81□□□□□ -1.96
CSDE1-211ENST00000525970 ZNF426Q9BUY5 554 aa2.81□□□□□ -1.96
CSDE1-211ENST00000525970 SUCNR1Q9BXA5 334 aa2.81□□□□□ -1.96
CSDE1-211ENST00000525970 RDH14Q9HBH5 336 aa2.81□□□□□ -1.96
CSDE1-211ENST00000525970 ELP1O95163 1332 aa2.81□□□□□ -1.96
CSDE1-211ENST00000525970 IGHV3-49A0A0A0MS15 119 aa2.8□□□□□ -1.96
CSDE1-211ENST00000525970 IGKV1-6A0A0C4DH72 117 aa2.8□□□□□ -1.96
CSDE1-211ENST00000525970 C9J4A7 227 aa2.8□□□□□ -1.96
CSDE1-211ENST00000525970 UPK2O00526 184 aa2.8□□□□□ -1.96
CSDE1-211ENST00000525970 RBFOX2O43251 390 aaKnown RBP eCLIP2.8□□□□□ -1.963e-6■■■■□ 22.3
CSDE1-211ENST00000525970 CTDNEP1O95476 244 aa2.8□□□□□ -1.96
CSDE1-211ENST00000525970 SNAP29O95721 258 aa2.8□□□□□ -1.96
CSDE1-211ENST00000525970 CCNE2O96020 404 aa2.8□□□□□ -1.96
CSDE1-211ENST00000525970 IGKV1-39P01597 117 aa2.8□□□□□ -1.96
CSDE1-211ENST00000525970 ORM1P02763 201 aa2.8□□□□□ -1.96
CSDE1-211ENST00000525970 IGKV1D-39P04432 117 aa2.8□□□□□ -1.96
CSDE1-211ENST00000525970 CISD3P0C7P0 127 aa2.8□□□□□ -1.96
CSDE1-211ENST00000525970 NELFEP18615 380 aaKnown RBP2.8□□□□□ -1.96
CSDE1-211ENST00000525970 M6PRP20645 277 aa2.8□□□□□ -1.96
CSDE1-211ENST00000525970 CMC4P56277 68 aaPredicted RBP2.8□□□□□ -1.96
CSDE1-211ENST00000525970 C1QTNF8P60827 252 aa2.8□□□□□ -1.96
CSDE1-211ENST00000525970 ELF3P78545 371 aaPredicted RBP2.8□□□□□ -1.96
CSDE1-211ENST00000525970 LAMTOR1Q6IAA8 161 aa2.8□□□□□ -1.96
CSDE1-211ENST00000525970 ZFP1Q6P2D0 407 aa2.8□□□□□ -1.96
CSDE1-211ENST00000525970 MORN3Q6PF18 240 aaPredicted RBP2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms