RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 HMGN2P05204 90 aaKnown RBP1.09□□□□□ -2.23
CD44-212ENST00000524922 PTMAP06454 111 aaKnown RBP1.09□□□□□ -2.23
CD44-212ENST00000524922 DBIP07108 87 aaKnown RBP1.09□□□□□ -2.23
CD44-212ENST00000524922 HCKP08631 526 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 IL3P08700 152 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 CST2P09228 141 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 PGA4P0DJD7 388 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 PGA3P0DJD8 388 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 LYNX1P0DP58 116 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 UROSP10746 265 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 CD28P10747 220 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 PRPS1L1P21108 318 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 STOMP27105 288 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 SPRP35270 261 aaPredicted RBP1.09□□□□□ -2.23
CD44-212ENST00000524922 APLNRP35414 380 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 DDOSTP39656 456 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 ELK3P41970 407 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 MAP2K4P45985 399 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 MARCKSL1P49006 195 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 TGM4P49221 684 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 ZNF75DP51815 510 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 TAS2R39P59534 338 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 COPZ1P61923 177 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 SRPXP78539 464 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 BASP1P80723 227 aaKnown RBP1.09□□□□□ -2.23
CD44-212ENST00000524922 IL5RAQ01344 420 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 PAX5Q02548 391 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 GLO1Q04760 184 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 MEF2CQ06413 473 aaPredicted RBP1.09□□□□□ -2.23
CD44-212ENST00000524922 PUDPQ08623 228 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 SCRN3Q0VDG4 424 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 ECH1Q13011 328 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 PSG7Q13046 419 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 KIAA0040Q15053 153 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 SPA17Q15506 151 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 LTB4RQ15722 352 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 DUSP5Q16690 384 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 MICBQ29980 383 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 Q3ZCU0 254 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 LIN52Q52LA3 116 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 C2orf83Q53S99 150 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 IGSF11Q5DX21 431 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 CLEC12AQ5QGZ9 265 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 AVPI1Q5T686 147 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 ATAD3BQ5T9A4 648 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 TMEM225Q6GV28 225 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 PYHIN1Q6K0P9 492 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 NIPAL3Q6P499 406 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 TMEM107Q6UX40 140 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 BRD3OSQ6XYD6 125 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 ADAMTSL5Q6ZMM2 481 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 LRRC74BQ6ZQY2 392 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 GOLGA7Q7Z5G4 137 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 VMO1Q7Z5L0 202 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 ZCCHC24Q8N2G6 241 aaKnown RBP1.09□□□□□ -2.23
CD44-212ENST00000524922 FTMTQ8N4E7 242 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 ARFGAP2Q8N6H7 521 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 TCTEX1D1Q8N7M0 179 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 ANKFN1Q8N957 763 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 NOA1Q8NC60 698 aaKnown RBP1.09□□□□□ -2.23
CD44-212ENST00000524922 OR5AU1Q8NGC0 362 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 OR8J2Q8NGG1 315 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 OR5M1Q8NGP8 315 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 C16orf78Q8WTQ4 265 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 ANKRD49Q8WVL7 239 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 ITLN1Q8WWA0 313 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 SELENOMQ8WWX9 145 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 OR5P2Q8WZ92 322 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 MYDGFQ969H8 173 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 ST6GALNAC6Q969X2 333 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 CCDC126Q96EE4 140 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 FAM120BQ96EK7 910 aaKnown RBP1.09□□□□□ -2.23
CD44-212ENST00000524922 PHYHIPLQ96FC7 376 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 FAM210BQ96KR6 192 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 UBE2E2Q96LR5 201 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 OR2V2Q96R30 315 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 SDF2Q99470 211 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 SSX3Q99909 188 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 ZNF426Q9BUY5 554 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 ALG12Q9BV10 488 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 THUMPD3Q9BV44 507 aaKnown RBP1.09□□□□□ -2.23
CD44-212ENST00000524922 MRPL13Q9BYD1 178 aaKnown RBP1.09□□□□□ -2.23
CD44-212ENST00000524922 ULBP2Q9BZM5 246 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 PPA2Q9H2U2 334 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 OR51J1Q9H342 316 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 GHITMQ9H3K2 345 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 REEP4Q9H6H4 257 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 NARFLQ9H6Q4 476 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 WDR55Q9H6Y2 383 aaPredicted RBP1.09□□□□□ -2.23
CD44-212ENST00000524922 TMEM185BQ9H7F4 350 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 PLEKHA1Q9HB21 404 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 DNAJC4Q9NNZ3 241 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 RRAGDQ9NQL2 400 aaPredicted RBP1.09□□□□□ -2.23
CD44-212ENST00000524922 CTPS2Q9NRF8 586 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 GLTPQ9NZD2 209 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 CD274Q9NZQ7 290 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 DNAJB9Q9UBS3 223 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 ATP6V1HQ9UI12 483 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 ZNF391Q9UJN7 358 aa1.09□□□□□ -2.23
CD44-212ENST00000524922 RPS6KA6Q9UK32 745 aa1.09□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms