RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-223ENST00000523125 PP6455Q8WZ26 134 aa10.07□□□□□ -0.8
VEGFA-223ENST00000523125 SLAMF9Q96A28 289 aa10.07□□□□□ -0.8
VEGFA-223ENST00000523125 PELI1Q96FA3 418 aa10.07□□□□□ -0.8
VEGFA-223ENST00000523125 CEP19Q96LK0 163 aa10.07□□□□□ -0.8
VEGFA-223ENST00000523125 SLC29A1Q99808 456 aa10.07□□□□□ -0.8
VEGFA-223ENST00000523125 C16orf95Q9H693 158 aa10.07□□□□□ -0.8
VEGFA-223ENST00000523125 IL36RNQ9UBH0 155 aa10.07□□□□□ -0.8
VEGFA-223ENST00000523125 MEGF11A6BM72 1044 aa10.06□□□□□ -0.8
VEGFA-223ENST00000523125 OR4C45A6NMZ5 311 aa10.06□□□□□ -0.8
VEGFA-223ENST00000523125 C17orf98A8MV24 154 aa10.06□□□□□ -0.8
VEGFA-223ENST00000523125 TSPAN9O75954 239 aa10.06□□□□□ -0.8
VEGFA-223ENST00000523125 INMTO95050 263 aa10.06□□□□□ -0.8
VEGFA-223ENST00000523125 SERPINA3P01011 423 aa10.06□□□□□ -0.8
VEGFA-223ENST00000523125 CHRM2P08172 466 aa10.06□□□□□ -0.8
VEGFA-223ENST00000523125 NPBWR2P48146 333 aa10.06□□□□□ -0.8
VEGFA-223ENST00000523125 CCR9P51686 369 aa10.06□□□□□ -0.8
VEGFA-223ENST00000523125 CRIP3Q6Q6R5 217 aa10.06□□□□□ -0.8
VEGFA-223ENST00000523125 C17orf107Q6ZR85 190 aa10.06□□□□□ -0.8
VEGFA-223ENST00000523125 UTS2BQ765I0 119 aa10.06□□□□□ -0.8
VEGFA-223ENST00000523125 TCF23Q7RTU1 214 aa10.06□□□□□ -0.8
VEGFA-223ENST00000523125 RNF144BQ7Z419 303 aa10.06□□□□□ -0.8
VEGFA-223ENST00000523125 EGFL6Q8IUX8 553 aa10.06□□□□□ -0.8
VEGFA-223ENST00000523125 ENTHD1Q8IYW4 607 aa10.06□□□□□ -0.8
VEGFA-223ENST00000523125 ACBD7Q8N6N7 88 aa10.06□□□□□ -0.8
VEGFA-223ENST00000523125 DNAAF1Q8NEP3 725 aa10.06□□□□□ -0.8
VEGFA-223ENST00000523125 OR51A4Q8NGJ6 313 aa10.06□□□□□ -0.8
VEGFA-223ENST00000523125 RHOXF1Q8NHV9 184 aa10.06□□□□□ -0.8
VEGFA-223ENST00000523125 FGGYQ96C11 551 aa10.06□□□□□ -0.8
VEGFA-223ENST00000523125 LGALS12Q96DT0 336 aa10.06□□□□□ -0.8
VEGFA-223ENST00000523125 BORCS8Q96FH0 119 aa10.06□□□□□ -0.8
VEGFA-223ENST00000523125 SSX3Q99909 188 aa10.06□□□□□ -0.8
VEGFA-223ENST00000523125 ZNF649Q9BS31 505 aa10.06□□□□□ -0.8
VEGFA-223ENST00000523125 MEGF9Q9H1U4 602 aa10.06□□□□□ -0.8
VEGFA-223ENST00000523125 HEXA-AS1Q9H8Q6 139 aa10.06□□□□□ -0.8
VEGFA-223ENST00000523125 SEBOXQ9HB31 216 aaPredicted RBP10.06□□□□□ -0.8
VEGFA-223ENST00000523125 A0A1W2PPH5 198 aa10.05□□□□□ -0.8
VEGFA-223ENST00000523125 TMEM82A0PJX8 343 aa10.05□□□□□ -0.8
VEGFA-223ENST00000523125 MEX3AA1L020 520 aaKnown RBP10.05□□□□□ -0.8
VEGFA-223ENST00000523125 BTBD17A6NE02 478 aa10.05□□□□□ -0.8
VEGFA-223ENST00000523125 H3BUX3 64 aa10.05□□□□□ -0.8
VEGFA-223ENST00000523125 J3QLW9 94 aa10.05□□□□□ -0.8
VEGFA-223ENST00000523125 WIPF1O43516 503 aa10.05□□□□□ -0.8
VEGFA-223ENST00000523125 DBTP11182 482 aaKnown RBP10.05□□□□□ -0.8
VEGFA-223ENST00000523125 PIPP12273 146 aaPredicted RBP10.05□□□□□ -0.8
VEGFA-223ENST00000523125 ZNF19P17023 458 aa10.05□□□□□ -0.8
VEGFA-223ENST00000523125 ATF1P18846 271 aa10.05□□□□□ -0.8
VEGFA-223ENST00000523125 TGFBR2P37173 567 aa10.05□□□□□ -0.8
VEGFA-223ENST00000523125 RBP2P50120 134 aa10.05□□□□□ -0.8
VEGFA-223ENST00000523125 BMXP51813 675 aa10.05□□□□□ -0.8
VEGFA-223ENST00000523125 ZNF91Q05481 1191 aa10.05□□□□□ -0.8
VEGFA-223ENST00000523125 GALEQ14376 348 aa10.05□□□□□ -0.8
VEGFA-223ENST00000523125 CNN3Q15417 329 aaKnown RBP10.05□□□□□ -0.8
VEGFA-223ENST00000523125 DHRS7BQ6IAN0 325 aaPredicted RBP10.05□□□□□ -0.8
VEGFA-223ENST00000523125 BRICD5Q6PL45 260 aa10.05□□□□□ -0.8
VEGFA-223ENST00000523125 LHFPL3Q86UP9 236 aa10.05□□□□□ -0.8
VEGFA-223ENST00000523125 OR8H2Q8N162 312 aa10.05□□□□□ -0.8
VEGFA-223ENST00000523125 ASCC1Q8N9N2 400 aaKnown RBP10.05□□□□□ -0.8
VEGFA-223ENST00000523125 OR5R1Q8NH85 324 aa10.05□□□□□ -0.8
VEGFA-223ENST00000523125 PPP1R35Q8TAP8 253 aa10.05□□□□□ -0.8
VEGFA-223ENST00000523125 PIFOQ8TCI5 191 aa10.05□□□□□ -0.8
VEGFA-223ENST00000523125 C4orf36Q96KX1 117 aa10.05□□□□□ -0.8
VEGFA-223ENST00000523125 ISG20L2Q9H9L3 353 aaKnown RBP10.05□□□□□ -0.8
VEGFA-223ENST00000523125 S100A14Q9HCY8 104 aa10.05□□□□□ -0.8
VEGFA-223ENST00000523125 RBFOX1Q9NWB1 397 aaKnown RBP10.05□□□□□ -0.8
VEGFA-223ENST00000523125 MYRFQ9Y2G1 1151 aa10.05□□□□□ -0.8
VEGFA-223ENST00000523125 GMPPBQ9Y5P6 360 aa10.05□□□□□ -0.8
VEGFA-223ENST00000523125 TET2Q6N021 2002 aaPredicted RBP10.04□□□□□ -0.8
VEGFA-223ENST00000523125 FAM90A8PA6NJQ4 464 aa10.04□□□□□ -0.8
VEGFA-223ENST00000523125 IGHA1P01876 353 aa10.04□□□□□ -0.8
VEGFA-223ENST00000523125 HTR1AP08908 422 aa10.04□□□□□ -0.8
VEGFA-223ENST00000523125 ZNF728P0DKX0 622 aa10.04□□□□□ -0.8
VEGFA-223ENST00000523125 BCL3P20749 454 aa10.04□□□□□ -0.8
VEGFA-223ENST00000523125 COX7A1P24310 79 aa10.04□□□□□ -0.8
VEGFA-223ENST00000523125 AZGP1P25311 298 aaKnown RBP10.04□□□□□ -0.8
VEGFA-223ENST00000523125 DUSP1P28562 367 aa10.04□□□□□ -0.8
VEGFA-223ENST00000523125 ATP1B3P54709 279 aa10.04□□□□□ -0.8
VEGFA-223ENST00000523125 MTCP1P56278 107 aa10.04□□□□□ -0.8
VEGFA-223ENST00000523125 PDZK1IP1Q13113 114 aa10.04□□□□□ -0.8
VEGFA-223ENST00000523125 ALKBH1Q13686 389 aaKnown RBP10.04□□□□□ -0.8
VEGFA-223ENST00000523125 AANATQ16613 207 aa10.04□□□□□ -0.8
VEGFA-223ENST00000523125 LDLRAD2Q5SZI1 272 aa10.04□□□□□ -0.8
VEGFA-223ENST00000523125 ASPHD2Q6ICH7 369 aa10.04□□□□□ -0.8
VEGFA-223ENST00000523125 SLC35E4Q6ICL7 350 aa10.04□□□□□ -0.8
VEGFA-223ENST00000523125 ZNF782Q6ZMW2 699 aaPredicted RBP10.04□□□□□ -0.8
VEGFA-223ENST00000523125 GDPD3Q7L5L3 318 aa10.04□□□□□ -0.8
VEGFA-223ENST00000523125 LHFPL4Q7Z7J7 247 aa10.04□□□□□ -0.8
VEGFA-223ENST00000523125 DYNAPQ8N1N2 210 aa10.04□□□□□ -0.8
VEGFA-223ENST00000523125 OR52N4Q8NGI2 321 aa10.04□□□□□ -0.8
VEGFA-223ENST00000523125 EMG1Q92979 244 aaKnown RBP10.04□□□□□ -0.8
VEGFA-223ENST00000523125 SNX22Q96L94 193 aa10.04□□□□□ -0.8
VEGFA-223ENST00000523125 C9orf16Q9BUW7 83 aa10.04□□□□□ -0.8
VEGFA-223ENST00000523125 PPA2Q9H2U2 334 aa10.04□□□□□ -0.8
VEGFA-223ENST00000523125 AMBNQ9NP70 447 aa10.04□□□□□ -0.8
VEGFA-223ENST00000523125 FAM118AQ9NWS6 357 aa10.04□□□□□ -0.8
VEGFA-223ENST00000523125 HHLA2Q9UM44 414 aa10.04□□□□□ -0.8
VEGFA-223ENST00000523125 IGKV1-12A0A0C4DH73 117 aa10.03□□□□□ -0.8
VEGFA-223ENST00000523125 TRBV2A0A0J9YWF9 115 aa10.03□□□□□ -0.8
VEGFA-223ENST00000523125 LOC100130705A0A1B0GUX0 176 aa10.03□□□□□ -0.8
VEGFA-223ENST00000523125 hCG_1809904A0A1W2PP81 198 aa10.03□□□□□ -0.8
VEGFA-223ENST00000523125 A0A1W2PPE2 198 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms