RNA–Protein interactions for RNA: ENST00000520520.1

CTNNA1-223, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 484 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-223ENST00000520520 GPR31O00270 319 aa7.54□□□□□ -1.2
CTNNA1-223ENST00000520520 TRAF3IP2O43734 574 aaPredicted RBP7.54□□□□□ -1.2
CTNNA1-223ENST00000520520 EIF1BO60739 113 aaKnown RBP7.54□□□□□ -1.2
CTNNA1-223ENST00000520520 ZG16O60844 167 aa7.54□□□□□ -1.2
CTNNA1-223ENST00000520520 KLF7O75840 302 aaPredicted RBP7.54□□□□□ -1.2
CTNNA1-223ENST00000520520 DHRS3O75911 302 aa7.54□□□□□ -1.2
CTNNA1-223ENST00000520520 VAMP5O95183 116 aa7.54□□□□□ -1.2
CTNNA1-223ENST00000520520 ICAM2P13598 275 aa7.54□□□□□ -1.2
CTNNA1-223ENST00000520520 CSNK1A1P48729 337 aa7.54□□□□□ -1.2
CTNNA1-223ENST00000520520 SULT1A2P50226 295 aa7.54□□□□□ -1.2
CTNNA1-223ENST00000520520 RAB5CP51148 216 aa7.54□□□□□ -1.2
CTNNA1-223ENST00000520520 RAB13P51153 203 aa7.54□□□□□ -1.2
CTNNA1-223ENST00000520520 ZNF84P51523 738 aa7.54□□□□□ -1.2
CTNNA1-223ENST00000520520 SRPXP78539 464 aa7.54□□□□□ -1.2
CTNNA1-223ENST00000520520 DCDP81605 110 aaKnown RBP7.54□□□□□ -1.2
CTNNA1-223ENST00000520520 PLXDC2Q6UX71 529 aa7.54□□□□□ -1.2
CTNNA1-223ENST00000520520 FAM57BQ71RH2 274 aa7.54□□□□□ -1.2
CTNNA1-223ENST00000520520 LDLRAD3Q86YD5 345 aa7.54□□□□□ -1.2
CTNNA1-223ENST00000520520 LINC00528Q8N1L1 170 aa7.54□□□□□ -1.2
CTNNA1-223ENST00000520520 FAM89BQ8N5H3 189 aa7.54□□□□□ -1.2
CTNNA1-223ENST00000520520 FAM71E2Q8N5Q1 922 aa7.54□□□□□ -1.2
CTNNA1-223ENST00000520520 CCDC71LQ8N9Z2 235 aa7.54□□□□□ -1.2
CTNNA1-223ENST00000520520 ZSCAN4Q8NAM6 433 aaPredicted RBP7.54□□□□□ -1.2
CTNNA1-223ENST00000520520 NFAM1Q8NET5 270 aaPredicted RBP7.54□□□□□ -1.2
CTNNA1-223ENST00000520520 OR10S1Q8NGN2 331 aa7.54□□□□□ -1.2
CTNNA1-223ENST00000520520 OR13G1Q8NGZ3 307 aa7.54□□□□□ -1.2
CTNNA1-223ENST00000520520 SPSB1Q96BD6 273 aa7.54□□□□□ -1.2
CTNNA1-223ENST00000520520 INTS12Q96CB8 462 aaKnown RBP7.54□□□□□ -1.2
CTNNA1-223ENST00000520520 ARHGAP5-AS1Q96IT6 56 aa7.54□□□□□ -1.2
CTNNA1-223ENST00000520520 ARL5BQ96KC2 179 aa7.54□□□□□ -1.2
CTNNA1-223ENST00000520520 OR5B2Q96R09 309 aa7.54□□□□□ -1.2
CTNNA1-223ENST00000520520 NKX3-1Q99801 234 aaPredicted RBP7.54□□□□□ -1.2
CTNNA1-223ENST00000520520 NRIP2Q9BQI9 281 aa7.54□□□□□ -1.2
CTNNA1-223ENST00000520520 TCEAL7Q9BRU2 100 aa7.54□□□□□ -1.2
CTNNA1-223ENST00000520520 CHST5Q9GZS9 411 aa7.54□□□□□ -1.2
CTNNA1-223ENST00000520520 SLC5A7Q9GZV3 580 aa7.54□□□□□ -1.2
CTNNA1-223ENST00000520520 ZNF552Q9H707 407 aaPredicted RBP7.54□□□□□ -1.2
CTNNA1-223ENST00000520520 RHOFQ9HBH0 211 aa7.54□□□□□ -1.2
CTNNA1-223ENST00000520520 ZNF160Q9HCG1 818 aa7.54□□□□□ -1.2
CTNNA1-223ENST00000520520 CYTL1Q9NRR1 136 aa7.54□□□□□ -1.2
CTNNA1-223ENST00000520520 FAM212BQ9NTI7 297 aaPredicted RBP7.54□□□□□ -1.2
CTNNA1-223ENST00000520520 ASH2LQ9UBL3 628 aa7.54□□□□□ -1.2
CTNNA1-223ENST00000520520 ATPIF1Q9UII2 106 aa7.54□□□□□ -1.2
CTNNA1-223ENST00000520520 FBXO9Q9UK97 447 aaPredicted RBP7.54□□□□□ -1.2
CTNNA1-223ENST00000520520 NXT1Q9UKK6 140 aaKnown RBP7.54□□□□□ -1.2
CTNNA1-223ENST00000520520 KCNIP3Q9Y2W7 256 aa7.54□□□□□ -1.2
CTNNA1-223ENST00000520520 STRAPQ9Y3F4 350 aaKnown RBP7.54□□□□□ -1.2
CTNNA1-223ENST00000520520 IGKV1D-43A0A0B4J1Z2 117 aa7.53□□□□□ -1.2
CTNNA1-223ENST00000520520 WIPF3A6NGB9 483 aa7.53□□□□□ -1.2
CTNNA1-223ENST00000520520 GJE1A6NN92 205 aa7.53□□□□□ -1.2
CTNNA1-223ENST00000520520 ADAM10O14672 748 aa7.53□□□□□ -1.2
CTNNA1-223ENST00000520520 SOCS1O15524 211 aa7.53□□□□□ -1.2
CTNNA1-223ENST00000520520 FBXO24O75426 580 aa7.53□□□□□ -1.2
CTNNA1-223ENST00000520520 HPNP05981 417 aa7.53□□□□□ -1.2
CTNNA1-223ENST00000520520 DTYMKP23919 212 aa7.53□□□□□ -1.2
CTNNA1-223ENST00000520520 PTGFRP43088 359 aa7.53□□□□□ -1.2
CTNNA1-223ENST00000520520 AKR1D1P51857 326 aa7.53□□□□□ -1.2
CTNNA1-223ENST00000520520 DVL1P1P54792 670 aaPredicted RBP7.53□□□□□ -1.2
CTNNA1-223ENST00000520520 SSPNQ14714 243 aa7.53□□□□□ -1.2
CTNNA1-223ENST00000520520 PEA15Q15121 130 aa7.53□□□□□ -1.2
CTNNA1-223ENST00000520520 KISS1Q15726 138 aa7.53□□□□□ -1.2
CTNNA1-223ENST00000520520 HYAL4Q2M3T9 481 aa7.53□□□□□ -1.2
CTNNA1-223ENST00000520520 IAH1Q2TAA2 248 aaPredicted RBP7.53□□□□□ -1.2
CTNNA1-223ENST00000520520 NKAIN1Q4KMZ8 207 aa7.53□□□□□ -1.2
CTNNA1-223ENST00000520520 SLC22A6Q4U2R8 563 aa7.53□□□□□ -1.2
CTNNA1-223ENST00000520520 ABCA11PQ4W5N1 156 aa7.53□□□□□ -1.2
CTNNA1-223ENST00000520520 PLAC9Q5JTB6 97 aa7.53□□□□□ -1.2
CTNNA1-223ENST00000520520 C10orf128Q5T292 105 aa7.53□□□□□ -1.2
CTNNA1-223ENST00000520520 LINC00696Q6ZRV3 163 aa7.53□□□□□ -1.2
CTNNA1-223ENST00000520520 SLC16A14Q7RTX9 510 aa7.53□□□□□ -1.2
CTNNA1-223ENST00000520520 PPP1R32Q7Z5V6 425 aa7.53□□□□□ -1.2
CTNNA1-223ENST00000520520 C15orf54Q8N8G6 183 aa7.53□□□□□ -1.2
CTNNA1-223ENST00000520520 APCDD1LQ8NCL9 501 aa7.53□□□□□ -1.2
CTNNA1-223ENST00000520520 LFNGQ8NES3 379 aa7.53□□□□□ -1.2
CTNNA1-223ENST00000520520 OR2M3Q8NG83 312 aa7.53□□□□□ -1.2
CTNNA1-223ENST00000520520 OR14K1Q8NGZ2 314 aa7.53□□□□□ -1.2
CTNNA1-223ENST00000520520 TMEM230Q96A57 120 aa7.53□□□□□ -1.2
CTNNA1-223ENST00000520520 C1orf147Q96MC9 270 aaPredicted RBP7.53□□□□□ -1.2
CTNNA1-223ENST00000520520 TECTBQ96PL2 329 aa7.53□□□□□ -1.2
CTNNA1-223ENST00000520520 NICN1Q9BSH3 213 aa7.53□□□□□ -1.2
CTNNA1-223ENST00000520520 RNF126Q9BV68 326 aa7.53□□□□□ -1.2
CTNNA1-223ENST00000520520 EMC6Q9BV81 110 aa7.53□□□□□ -1.2
CTNNA1-223ENST00000520520 PECRQ9BY49 303 aa7.53□□□□□ -1.2
CTNNA1-223ENST00000520520 NELFAQ9H3P2 528 aa7.53□□□□□ -1.2
CTNNA1-223ENST00000520520 FN3KRPQ9HA64 309 aa7.53□□□□□ -1.2
CTNNA1-223ENST00000520520 NECAP2Q9NVZ3 263 aa7.53□□□□□ -1.2
CTNNA1-223ENST00000520520 RCC2Q9P258 522 aaKnown RBP7.53□□□□□ -1.2
CTNNA1-223ENST00000520520 B3GAT1Q9P2W7 334 aa7.53□□□□□ -1.2
CTNNA1-223ENST00000520520 SH3BGRL2Q9UJC5 107 aa7.53□□□□□ -1.2
CTNNA1-223ENST00000520520 ZNF391Q9UJN7 358 aa7.53□□□□□ -1.2
CTNNA1-223ENST00000520520 V9GYS6 101 aa7.53□□□□□ -1.2
CTNNA1-223ENST00000520520 HIVEP3Q5T1R4 2406 aa7.52□□□□□ -1.2
CTNNA1-223ENST00000520520 CSMD2Q7Z408 3487 aa7.52□□□□□ -1.21
CTNNA1-223ENST00000520520 A0A0A6YYD4 124 aa7.52□□□□□ -1.21
CTNNA1-223ENST00000520520 C17orf51A8MQB3 221 aa7.52□□□□□ -1.21
CTNNA1-223ENST00000520520 E5RGE8 158 aa7.52□□□□□ -1.21
CTNNA1-223ENST00000520520 NPIPA2E9PIF3 369 aa7.52□□□□□ -1.21
CTNNA1-223ENST00000520520 NPIPA3F8WFD2 350 aa7.52□□□□□ -1.21
CTNNA1-223ENST00000520520 DNPH1O43598 174 aa7.52□□□□□ -1.21
CTNNA1-223ENST00000520520 HTR3BO95264 441 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms