RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 A8MWP6 167 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 RFPL4AL1F8VTS6 287 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 K7ERQ8 282 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 L7N2F9 121 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 FFAR1O14842 300 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 CASKO14936 926 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 TCAPO15273 167 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 EMC8O43402 210 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 CBR3O75828 277 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 TOXO94900 526 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 UBL3O95164 117 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 SIX6O95475 246 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 GUCA1CO95843 209 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 C6orf47O95873 294 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 SERPINA3P01011 423 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 MT-ND4LP03901 98 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 ALDOBP05062 364 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 CD5P06127 495 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 EIF4EP06730 217 aaKnown RBP2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 ALPIP09923 528 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 KRTAP1-4P0C5Y4 121 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 SLC35G4P0C7Q5 338 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 ZNF806P0C7X5 589 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 OR8G3PP0DMU2 310 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 OR12D1P0DN82 309 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 ALPPL2P10696 532 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 LAMP1P11279 417 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 MGMTP16455 207 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 RAB4AP20338 218 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 PVALBP20472 110 aaPredicted RBP2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 CSRP1P21291 193 aaKnown RBP2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 GDF1P27539 372 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 DDTP30046 118 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 CD79BP40259 229 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 CDKN2CP42773 168 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 RABIFP47224 123 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 CCR6P51684 374 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 SUCLG1P53597 346 aaKnown RBP2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 CRISP1P54107 249 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 RBX1P62877 108 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 CXCL6P80162 114 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 DEFA6Q01524 100 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 TWF1Q12792 350 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 CHIT1Q13231 466 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 SRSF5Q13243 272 aaKnown RBP2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 HTR4Q13639 388 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 ZNF345Q14585 488 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 GANABQ14697 944 aaKnown RBP2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 SLC10A1Q14973 349 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 ZNF630Q2M218 657 aaPredicted RBP2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 DEFB115Q30KQ5 88 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 FBXO48Q5FWF7 155 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 LY6G6FQ5SQ64 297 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 CPTPQ5TA50 214 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 FHL5Q5TD97 284 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 TMEM244Q5VVB8 128 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 SLC22A10Q63ZE4 541 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 HBMQ6B0K9 141 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 FAM71E1Q6IPT2 247 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 RPL13AP3Q6NVV1 102 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 LEG1Q6P5S2 330 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 HAGHLQ6PII5 290 aaPredicted RBP2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 FAM151BQ6UXP7 276 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 SSX9Q7RTT3 188 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 FAM122BQ7Z309 247 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 OR2W3Q7Z3T1 314 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 C6orf120Q7Z4R8 191 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 TMEM17Q86X19 198 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 OR6V1Q8N148 313 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 ZNF561Q8N587 486 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 KCNRGQ8N5I3 272 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 TRAM1L1Q8N609 369 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 CLDN19Q8N6F1 224 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 ZNF525Q8N782 197 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 C15orf54Q8N8G6 183 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 SDR9C7Q8NEX9 313 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 OR4F17Q8NGA8 305 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 OR10G2Q8NGC3 310 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 OR52I1Q8NGK6 324 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 OR8J1Q8NGP2 316 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 OR9Q1Q8NGQ5 310 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 OR9A4Q8NGU2 314 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 AKR7LQ8NHP1 331 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 LYPD6BQ8NI32 183 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 COQ8AQ8NI60 647 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 RFESDQ8TAC1 157 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 LKAAEAR1Q8TD35 194 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 SMIM4Q8WVI0 70 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 GTSF1Q8WW33 167 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 LCN9Q8WX39 176 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 OTUB2Q96DC9 234 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 TCEAL4Q96EI5 215 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 DNAJA3Q96EY1 480 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 SMIM8Q96KF7 97 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 ZNF285Q96NJ3 590 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 OR4F4Q96R69 305 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 ADAT1Q9BUB4 502 aaKnown RBP2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 PDCD10Q9BUL8 212 aa2.43□□□□□ -2.02
HMGB1P41-201ENST00000520234 TMED9Q9BVK6 235 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms