RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 SHHQ15465 462 aa3.11□□□□□ -1.91
HMGB1P46-201ENST00000520062 TRAM1Q15629 374 aa3.11□□□□□ -1.91
HMGB1P46-201ENST00000520062 TRIP13Q15645 432 aaPredicted RBP3.11□□□□□ -1.91
HMGB1P46-201ENST00000520062 KLHL12Q53G59 568 aa3.11□□□□□ -1.91
HMGB1P46-201ENST00000520062 PRSS54Q6PEW0 395 aa3.11□□□□□ -1.91
HMGB1P46-201ENST00000520062 TMEM105Q8N8V8 129 aa3.11□□□□□ -1.91
HMGB1P46-201ENST00000520062 ST20-AS1Q8NBB2 130 aa3.11□□□□□ -1.91
HMGB1P46-201ENST00000520062 OR5P2Q8WZ92 322 aa3.11□□□□□ -1.91
HMGB1P46-201ENST00000520062 ZMYND19Q96E35 227 aaPredicted RBP3.11□□□□□ -1.91
HMGB1P46-201ENST00000520062 GPR82Q96P67 336 aa3.11□□□□□ -1.91
HMGB1P46-201ENST00000520062 MARVELD1Q9BSK0 173 aa3.11□□□□□ -1.91
HMGB1P46-201ENST00000520062 MED10Q9BTT4 135 aa3.11□□□□□ -1.91
HMGB1P46-201ENST00000520062 PARP11Q9NR21 331 aa3.11□□□□□ -1.91
HMGB1P46-201ENST00000520062 RAB22AQ9UL26 194 aa3.11□□□□□ -1.91
HMGB1P46-201ENST00000520062 KLF13Q9Y2Y9 288 aaPredicted RBP3.11□□□□□ -1.91
HMGB1P46-201ENST00000520062 KRTAP9-6A8MVA2 160 aa3.1□□□□□ -1.91
HMGB1P46-201ENST00000520062 CLDN34H7C241 214 aa3.1□□□□□ -1.91
HMGB1P46-201ENST00000520062 SCN2BO60939 215 aa3.1□□□□□ -1.91
HMGB1P46-201ENST00000520062 OR2A4O95047 310 aa3.1□□□□□ -1.91
HMGB1P46-201ENST00000520062 IGKV1-39P01597 117 aa3.1□□□□□ -1.91
HMGB1P46-201ENST00000520062 IGKV1D-39P04432 117 aa3.1□□□□□ -1.91
HMGB1P46-201ENST00000520062 MPV17P39210 176 aa3.1□□□□□ -1.91
HMGB1P46-201ENST00000520062 GCLMP48507 274 aa3.1□□□□□ -1.91
HMGB1P46-201ENST00000520062 ATP5G2Q06055 141 aa3.1□□□□□ -1.91
HMGB1P46-201ENST00000520062 BAXQ07812 192 aa3.1□□□□□ -1.91
HMGB1P46-201ENST00000520062 CEACAM21Q3KPI0 293 aa3.1□□□□□ -1.91
HMGB1P46-201ENST00000520062 FAM104BQ5XKR9 115 aa3.1□□□□□ -1.91
HMGB1P46-201ENST00000520062 PDPK2PQ6A1A2 396 aa3.1□□□□□ -1.91
HMGB1P46-201ENST00000520062 KRTAP5-11Q6L8G4 156 aa3.1□□□□□ -1.91
HMGB1P46-201ENST00000520062 ERICH5Q6P6B1 374 aa3.1□□□□□ -1.91
HMGB1P46-201ENST00000520062 NEGR1Q7Z3B1 354 aa3.1□□□□□ -1.91
HMGB1P46-201ENST00000520062 PDPNQ86YL7 162 aa3.1□□□□□ -1.91
HMGB1P46-201ENST00000520062 OSR2Q8N2R0 312 aa3.1□□□□□ -1.91
HMGB1P46-201ENST00000520062 APCDD1LQ8NCL9 501 aa3.1□□□□□ -1.91
HMGB1P46-201ENST00000520062 ZNF738Q8NE65 137 aa3.1□□□□□ -1.91
HMGB1P46-201ENST00000520062 CLHC1Q8NHS4 586 aa3.1□□□□□ -1.91
HMGB1P46-201ENST00000520062 ZNF420Q8TAQ5 688 aaPredicted RBP3.1□□□□□ -1.91
HMGB1P46-201ENST00000520062 FAM57AQ8TBR7 257 aa3.1□□□□□ -1.91
HMGB1P46-201ENST00000520062 PHF10Q8WUB8 498 aaKnown RBP3.1□□□□□ -1.91
HMGB1P46-201ENST00000520062 PDCD6IPQ8WUM4 868 aaKnown RBP3.1□□□□□ -1.91
HMGB1P46-201ENST00000520062 BLNKQ8WV28 456 aa3.1□□□□□ -1.91
HMGB1P46-201ENST00000520062 C22orf15Q8WYQ4 148 aa3.1□□□□□ -1.91
HMGB1P46-201ENST00000520062 OR2A7Q96R45 310 aa3.1□□□□□ -1.91
HMGB1P46-201ENST00000520062 LHX5Q9H2C1 402 aa3.1□□□□□ -1.91
HMGB1P46-201ENST00000520062 ASB7Q9H672 318 aa3.1□□□□□ -1.91
HMGB1P46-201ENST00000520062 SND1-IT1Q9HBX3 110 aa3.1□□□□□ -1.91
HMGB1P46-201ENST00000520062 IFT46Q9NQC8 304 aa3.1□□□□□ -1.91
HMGB1P46-201ENST00000520062 SNX24Q9Y343 169 aa3.1□□□□□ -1.91
HMGB1P46-201ENST00000520062 ELP1O95163 1332 aa3.1□□□□□ -1.91
HMGB1P46-201ENST00000520062 MYO10Q9HD67 2058 aa3.1□□□□□ -1.91
HMGB1P46-201ENST00000520062 LOC389332A0A1B0GUA5 103 aa3.09□□□□□ -1.91
HMGB1P46-201ENST00000520062 COLCA2A8K830 154 aa3.09□□□□□ -1.91
HMGB1P46-201ENST00000520062 DHRS3O75911 302 aa3.09□□□□□ -1.91
HMGB1P46-201ENST00000520062 BRI3O95415 125 aa3.09□□□□□ -1.91
HMGB1P46-201ENST00000520062 SLAMF1Q13291 335 aa3.09□□□□□ -1.91
HMGB1P46-201ENST00000520062 MOBPQ13875 183 aa3.09□□□□□ -1.91
HMGB1P46-201ENST00000520062 FLOT2Q14254 428 aa3.09□□□□□ -1.91
HMGB1P46-201ENST00000520062 SP6Q3SY56 376 aa3.09□□□□□ -1.91
HMGB1P46-201ENST00000520062 Q499Y3 187 aa3.09□□□□□ -1.91
HMGB1P46-201ENST00000520062 TRMT10CQ7L0Y3 403 aaKnown RBP3.09□□□□□ -1.91
HMGB1P46-201ENST00000520062 SSX7Q7RTT5 188 aa3.09□□□□□ -1.91
HMGB1P46-201ENST00000520062 PRNTQ86SH4 94 aa3.09□□□□□ -1.91
HMGB1P46-201ENST00000520062 SELENOHQ8IZQ5 122 aaKnown RBP3.09□□□□□ -1.91
HMGB1P46-201ENST00000520062 ZNF555Q8NEP9 628 aa3.09□□□□□ -1.91
HMGB1P46-201ENST00000520062 SLC26A10Q8NG04 563 aa3.09□□□□□ -1.91
HMGB1P46-201ENST00000520062 OR2AE1Q8NHA4 323 aa3.09□□□□□ -1.91
HMGB1P46-201ENST00000520062 LRRC45Q96CN5 670 aa3.09□□□□□ -1.91
HMGB1P46-201ENST00000520062 HBEGFQ99075 208 aa3.09□□□□□ -1.91
HMGB1P46-201ENST00000520062 PITX2Q99697 317 aa3.09□□□□□ -1.91
HMGB1P46-201ENST00000520062 C1orf50Q9BV19 199 aa3.09□□□□□ -1.91
HMGB1P46-201ENST00000520062 RDH14Q9HBH5 336 aa3.09□□□□□ -1.91
HMGB1P46-201ENST00000520062 NRBP2Q9NSY0 501 aa3.09□□□□□ -1.91
HMGB1P46-201ENST00000520062 MS4A12Q9NXJ0 267 aa3.09□□□□□ -1.91
HMGB1P46-201ENST00000520062 IL37Q9NZH6 218 aa3.09□□□□□ -1.91
HMGB1P46-201ENST00000520062 STX18Q9P2W9 335 aaKnown RBP3.09□□□□□ -1.91
HMGB1P46-201ENST00000520062 NRCAMQ92823 1304 aa3.09□□□□□ -1.91
HMGB1P46-201ENST00000520062 A0A1B0GX12 115 aa3.08□□□□□ -1.92
HMGB1P46-201ENST00000520062 A0A1B0GXF2 115 aa3.08□□□□□ -1.92
HMGB1P46-201ENST00000520062 RBFOX3A6NFN3 312 aa3.08□□□□□ -1.92
HMGB1P46-201ENST00000520062 CD300LBA8K4G0 201 aa3.08□□□□□ -1.92
HMGB1P46-201ENST00000520062 MKRN2OSH3BPM6 223 aa3.08□□□□□ -1.92
HMGB1P46-201ENST00000520062 CETN3O15182 167 aa3.08□□□□□ -1.92
HMGB1P46-201ENST00000520062 FABP7O15540 132 aa3.08□□□□□ -1.92
HMGB1P46-201ENST00000520062 YEATS4O95619 227 aa3.08□□□□□ -1.92
HMGB1P46-201ENST00000520062 GP1BAP07359 652 aa3.08□□□□□ -1.92
HMGB1P46-201ENST00000520062 CECR9P0C854 216 aa3.08□□□□□ -1.92
HMGB1P46-201ENST00000520062 SYT1P21579 422 aa3.08□□□□□ -1.92
HMGB1P46-201ENST00000520062 UGT2B10P36537 528 aa3.08□□□□□ -1.92
HMGB1P46-201ENST00000520062 MAGEA6P43360 314 aa3.08□□□□□ -1.92
HMGB1P46-201ENST00000520062 FUT5Q11128 374 aa3.08□□□□□ -1.92
HMGB1P46-201ENST00000520062 BNIP2Q12982 314 aa3.08□□□□□ -1.92
HMGB1P46-201ENST00000520062 EIF4EBP2Q13542 120 aaPredicted RBP3.08□□□□□ -1.92
HMGB1P46-201ENST00000520062 RBM48Q5RL73 367 aaKnown RBP3.08□□□□□ -1.92
HMGB1P46-201ENST00000520062 ZNF678Q5SXM1 525 aa3.08□□□□□ -1.92
HMGB1P46-201ENST00000520062 MED27Q6P2C8 311 aa3.08□□□□□ -1.92
HMGB1P46-201ENST00000520062 STK40Q8N2I9 435 aa3.08□□□□□ -1.92
HMGB1P46-201ENST00000520062 MIR7-3HGQ8N6C7 128 aa3.08□□□□□ -1.92
HMGB1P46-201ENST00000520062 ZNF709Q8N972 641 aa3.08□□□□□ -1.92
HMGB1P46-201ENST00000520062 OR5H2Q8NGV7 314 aa3.08□□□□□ -1.92
HMGB1P46-201ENST00000520062 TNFRSF14Q92956 283 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms