RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 C1QL4Q86Z23 238 aa10.06□□□□□ -0.8
CSMD1-205ENST00000519623 RDH10Q8IZV5 341 aa10.06□□□□□ -0.8
CSMD1-205ENST00000519623 OR11H6Q8NGC7 330 aa10.06□□□□□ -0.8
CSMD1-205ENST00000519623 OR4C13Q8NGP0 309 aa10.06□□□□□ -0.8
CSMD1-205ENST00000519623 SLAMF9Q96A28 289 aa10.06□□□□□ -0.8
CSMD1-205ENST00000519623 EME1Q96AY2 570 aa10.06□□□□□ -0.8
CSMD1-205ENST00000519623 CEP19Q96LK0 163 aa10.06□□□□□ -0.8
CSMD1-205ENST00000519623 SEBOXQ9HB31 216 aaPredicted RBP10.06□□□□□ -0.8
CSMD1-205ENST00000519623 RAB18Q9NP72 206 aa10.06□□□□□ -0.8
CSMD1-205ENST00000519623 ENOPH1Q9UHY7 261 aa10.06□□□□□ -0.8
CSMD1-205ENST00000519623 PLXNB1O43157 2135 aa10.06□□□□□ -0.8
CSMD1-205ENST00000519623 MEX3AA1L020 520 aaKnown RBP10.05□□□□□ -0.8
CSMD1-205ENST00000519623 INMTO95050 263 aa10.05□□□□□ -0.8
CSMD1-205ENST00000519623 RBP4P02753 201 aa10.05□□□□□ -0.8
CSMD1-205ENST00000519623 KIR3DL2P43630 455 aa10.05□□□□□ -0.8
CSMD1-205ENST00000519623 ZNF85Q03923 595 aa10.05□□□□□ -0.8
CSMD1-205ENST00000519623 TMED1Q13445 227 aa10.05□□□□□ -0.8
CSMD1-205ENST00000519623 LIAT1Q6ZQX7 453 aa10.05□□□□□ -0.8
CSMD1-205ENST00000519623 SLC25A26Q70HW3 274 aa10.05□□□□□ -0.8
CSMD1-205ENST00000519623 TCF23Q7RTU1 214 aa10.05□□□□□ -0.8
CSMD1-205ENST00000519623 EGFL6Q8IUX8 553 aa10.05□□□□□ -0.8
CSMD1-205ENST00000519623 KLHDC1Q8N7A1 406 aa10.05□□□□□ -0.8
CSMD1-205ENST00000519623 C11orf44Q8N8P7 122 aa10.05□□□□□ -0.8
CSMD1-205ENST00000519623 ASCC1Q8N9N2 400 aaKnown RBP10.05□□□□□ -0.8
CSMD1-205ENST00000519623 CCDC54Q8NEL0 328 aa10.05□□□□□ -0.8
CSMD1-205ENST00000519623 OR10H4Q8NGA5 316 aa10.05□□□□□ -0.8
CSMD1-205ENST00000519623 OR52N4Q8NGI2 321 aa10.05□□□□□ -0.8
CSMD1-205ENST00000519623 OR8J1Q8NGP2 316 aa10.05□□□□□ -0.8
CSMD1-205ENST00000519623 OR2T6Q8NHC8 308 aa10.05□□□□□ -0.8
CSMD1-205ENST00000519623 MALSU1Q96EH3 234 aa10.05□□□□□ -0.8
CSMD1-205ENST00000519623 CENPNQ96H22 339 aaPredicted RBP10.05□□□□□ -0.8
CSMD1-205ENST00000519623 SNX22Q96L94 193 aa10.05□□□□□ -0.8
CSMD1-205ENST00000519623 OSBPL10Q9BXB5 764 aa10.05□□□□□ -0.8
CSMD1-205ENST00000519623 GABARAPL3Q9BY60 117 aa10.05□□□□□ -0.8
CSMD1-205ENST00000519623 NPFFR1Q9GZQ6 430 aa10.05□□□□□ -0.8
CSMD1-205ENST00000519623 CHST5Q9GZS9 411 aa10.05□□□□□ -0.8
CSMD1-205ENST00000519623 TBL2Q9Y4P3 447 aaKnown RBP10.05□□□□□ -0.8
CSMD1-205ENST00000519623 KIAA2026Q5HYC2 2103 aa10.04□□□□□ -0.8
CSMD1-205ENST00000519623 IGKV1-9A0A0C4DH69 117 aa10.04□□□□□ -0.8
CSMD1-205ENST00000519623 A6NDX4 124 aa10.04□□□□□ -0.8
CSMD1-205ENST00000519623 GATBO75879 557 aaKnown RBP10.04□□□□□ -0.8
CSMD1-205ENST00000519623 SERPINA3P01011 423 aa10.04□□□□□ -0.8
CSMD1-205ENST00000519623 ARG1P05089 322 aa10.04□□□□□ -0.8
CSMD1-205ENST00000519623 IGHV1-8P0DP01 117 aa10.04□□□□□ -0.8
CSMD1-205ENST00000519623 FCGR1AP12314 374 aa10.04□□□□□ -0.8
CSMD1-205ENST00000519623 NPBWR2P48146 333 aa10.04□□□□□ -0.8
CSMD1-205ENST00000519623 EDDM3BP56851 147 aa10.04□□□□□ -0.8
CSMD1-205ENST00000519623 MEF2CQ06413 473 aaPredicted RBP10.04□□□□□ -0.8
CSMD1-205ENST00000519623 SSX2Q16385 188 aa10.04□□□□□ -0.8
CSMD1-205ENST00000519623 C1orf146Q5VVC0 180 aa10.04□□□□□ -0.8
CSMD1-205ENST00000519623 ZNF626Q68DY1 528 aa10.04□□□□□ -0.8
CSMD1-205ENST00000519623 GDPD3Q7L5L3 318 aa10.04□□□□□ -0.8
CSMD1-205ENST00000519623 OR8H2Q8N162 312 aa10.04□□□□□ -0.8
CSMD1-205ENST00000519623 Q8N2B8 174 aa10.04□□□□□ -0.8
CSMD1-205ENST00000519623 OR13D1Q8NGV5 346 aa10.04□□□□□ -0.8
CSMD1-205ENST00000519623 C10orf35Q96D05 121 aa10.04□□□□□ -0.8
CSMD1-205ENST00000519623 ADAT3Q96EY9 351 aaPredicted RBP10.04□□□□□ -0.8
CSMD1-205ENST00000519623 ADI1Q9BV57 179 aa10.04□□□□□ -0.8
CSMD1-205ENST00000519623 CDCA4Q9BXL8 241 aa10.04□□□□□ -0.8
CSMD1-205ENST00000519623 ZNF702PQ9H963 129 aa10.04□□□□□ -0.8
CSMD1-205ENST00000519623 PLEKHA1Q9HB21 404 aa10.04□□□□□ -0.8
CSMD1-205ENST00000519623 SERTAD4Q9NUC0 356 aa10.04□□□□□ -0.8
CSMD1-205ENST00000519623 IL36RNQ9UBH0 155 aa10.04□□□□□ -0.8
CSMD1-205ENST00000519623 OAZ3Q9UMX2 235 aa10.04□□□□□ -0.8
CSMD1-205ENST00000519623 TCF19Q9Y242 345 aa10.04□□□□□ -0.8
CSMD1-205ENST00000519623 A0A0G2JK05 382 aa10.03□□□□□ -0.8
CSMD1-205ENST00000519623 J3QRE1 110 aa10.03□□□□□ -0.8
CSMD1-205ENST00000519623 PSPNO60542 156 aa10.03□□□□□ -0.8
CSMD1-205ENST00000519623 ATP5HO75947 161 aa10.03□□□□□ -0.8
CSMD1-205ENST00000519623 IGHA1P01876 353 aa10.03□□□□□ -0.8
CSMD1-205ENST00000519623 OPN1MWP04001 364 aa10.03□□□□□ -0.8
CSMD1-205ENST00000519623 OPN1MW2P0DN77 364 aa10.03□□□□□ -0.8
CSMD1-205ENST00000519623 OPN1MW3P0DN78 364 aa10.03□□□□□ -0.8
CSMD1-205ENST00000519623 VSIG10L2P0DP72 767 aa10.03□□□□□ -0.8
CSMD1-205ENST00000519623 ATP6V1E1P36543 226 aa10.03□□□□□ -0.8
CSMD1-205ENST00000519623 RASSF2P50749 326 aa10.03□□□□□ -0.8
CSMD1-205ENST00000519623 FAM189A2Q15884 450 aa10.03□□□□□ -0.8
CSMD1-205ENST00000519623 TP53I3Q53FA7 332 aa10.03□□□□□ -0.8
CSMD1-205ENST00000519623 PLA1AQ53H76 456 aa10.03□□□□□ -0.8
CSMD1-205ENST00000519623 DTX3Q8N9I9 347 aa10.03□□□□□ -0.8
CSMD1-205ENST00000519623 DNAAF1Q8NEP3 725 aa10.03□□□□□ -0.8
CSMD1-205ENST00000519623 OR2G2Q8NGZ5 317 aa10.03□□□□□ -0.8
CSMD1-205ENST00000519623 WIPF2Q8TF74 440 aaPredicted RBP10.03□□□□□ -0.8
CSMD1-205ENST00000519623 TRUB1Q8WWH5 349 aaKnown RBP10.03□□□□□ -0.8
CSMD1-205ENST00000519623 PP6455Q8WZ26 134 aa10.03□□□□□ -0.8
CSMD1-205ENST00000519623 RFKQ969G6 155 aa10.03□□□□□ -0.8
CSMD1-205ENST00000519623 BORCS8Q96FH0 119 aa10.03□□□□□ -0.8
CSMD1-205ENST00000519623 ZNF714Q96N38 554 aa10.03□□□□□ -0.8
CSMD1-205ENST00000519623 NKX3-1Q99801 234 aaPredicted RBP10.03□□□□□ -0.8
CSMD1-205ENST00000519623 RIBC2Q9H4K1 309 aa10.03□□□□□ -0.8
CSMD1-205ENST00000519623 GNG8Q9UK08 70 aa10.03□□□□□ -0.8
CSMD1-205ENST00000519623 LOC107986453A0A1B0GWG9 222 aa10.02□□□□□ -0.81
CSMD1-205ENST00000519623 hADV38S2A0JD32 116 aa10.02□□□□□ -0.81
CSMD1-205ENST00000519623 SAC3D1A6NKF1 404 aa10.02□□□□□ -0.81
CSMD1-205ENST00000519623 E9PQ18 207 aa10.02□□□□□ -0.81
CSMD1-205ENST00000519623 G3V4G9 280 aa10.02□□□□□ -0.81
CSMD1-205ENST00000519623 HAND1O96004 215 aa10.02□□□□□ -0.81
CSMD1-205ENST00000519623 UBCP0CG48 685 aaKnown RBP10.02□□□□□ -0.81
CSMD1-205ENST00000519623 JUNBP17275 347 aaPredicted RBP10.02□□□□□ -0.81
CSMD1-205ENST00000519623 DUSP1P28562 367 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms