RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 MKXQ8IYA7 352 aa2.42□□□□□ -2.02
VPS13B-207ENST00000518569 PRSS58Q8IYP2 241 aa2.42□□□□□ -2.02
VPS13B-207ENST00000518569 MREGQ8N565 214 aa2.42□□□□□ -2.02
VPS13B-207ENST00000518569 C2orf73Q8N5S3 287 aaPredicted RBP2.42□□□□□ -2.02
VPS13B-207ENST00000518569 TPRX1Q8N7U7 411 aa2.42□□□□□ -2.02
VPS13B-207ENST00000518569 NKAPP1Q8N9T2 125 aa2.42□□□□□ -2.02
VPS13B-207ENST00000518569 VN1R2Q8NFZ6 395 aa2.42□□□□□ -2.02
VPS13B-207ENST00000518569 OR11H1Q8NG94 326 aa2.42□□□□□ -2.02
VPS13B-207ENST00000518569 OR10W1Q8NGF6 305 aa2.42□□□□□ -2.02
VPS13B-207ENST00000518569 OR11H2Q8NH07 326 aa2.42□□□□□ -2.02
VPS13B-207ENST00000518569 OR56B4Q8NH76 319 aa2.42□□□□□ -2.02
VPS13B-207ENST00000518569 OR5K2Q8NHB8 316 aa2.42□□□□□ -2.02
VPS13B-207ENST00000518569 OR10J5Q8NHC4 309 aa2.42□□□□□ -2.02
VPS13B-207ENST00000518569 LHFPL5Q8TAF8 219 aa2.42□□□□□ -2.02
VPS13B-207ENST00000518569 BAALCQ8WXS3 180 aa2.42□□□□□ -2.02
VPS13B-207ENST00000518569 CHCHD10Q8WYQ3 142 aaPredicted RBP2.42□□□□□ -2.02
VPS13B-207ENST00000518569 OR8D1Q8WZ84 308 aa2.42□□□□□ -2.02
VPS13B-207ENST00000518569 DCUN1D4Q92564 292 aa2.42□□□□□ -2.02
VPS13B-207ENST00000518569 UCN3Q969E3 161 aa2.42□□□□□ -2.02
VPS13B-207ENST00000518569 WDR34Q96EX3 536 aa2.42□□□□□ -2.02
VPS13B-207ENST00000518569 IMP4Q96G21 291 aaKnown RBP2.42□□□□□ -2.02
VPS13B-207ENST00000518569 HIST1H4GQ99525 98 aa2.42□□□□□ -2.02
VPS13B-207ENST00000518569 TSNAXQ99598 290 aaKnown RBP2.42□□□□□ -2.02
VPS13B-207ENST00000518569 GPR21Q99679 349 aa2.42□□□□□ -2.02
VPS13B-207ENST00000518569 TCEAL7Q9BRU2 100 aa2.42□□□□□ -2.02
VPS13B-207ENST00000518569 POLR2J2Q9GZM3 115 aaKnown RBP2.42□□□□□ -2.02
VPS13B-207ENST00000518569 POLR2J3Q9H1A7 115 aaKnown RBP2.42□□□□□ -2.02
VPS13B-207ENST00000518569 REEP4Q9H6H4 257 aa2.42□□□□□ -2.02
VPS13B-207ENST00000518569 RDH14Q9HBH5 336 aa2.42□□□□□ -2.02
VPS13B-207ENST00000518569 ZDHHC4Q9NPG8 344 aa2.42□□□□□ -2.02
VPS13B-207ENST00000518569 TMEM138Q9NPI0 162 aa2.42□□□□□ -2.02
VPS13B-207ENST00000518569 BIN3Q9NQY0 253 aa2.42□□□□□ -2.02
VPS13B-207ENST00000518569 MMP26Q9NRE1 261 aa2.42□□□□□ -2.02
VPS13B-207ENST00000518569 NLE1Q9NVX2 485 aaPredicted RBP2.42□□□□□ -2.02
VPS13B-207ENST00000518569 SPANXCQ9NY87 97 aa2.42□□□□□ -2.02
VPS13B-207ENST00000518569 LGALS13Q9UHV8 139 aa2.42□□□□□ -2.02
VPS13B-207ENST00000518569 ZNF225Q9UK10 706 aa2.42□□□□□ -2.02
VPS13B-207ENST00000518569 OR52A1Q9UKL2 312 aa2.42□□□□□ -2.02
VPS13B-207ENST00000518569 HHLA2Q9UM44 414 aa2.42□□□□□ -2.02
VPS13B-207ENST00000518569 NDUFAF1Q9Y375 327 aa2.42□□□□□ -2.02
VPS13B-207ENST00000518569 RPL36Q9Y3U8 105 aaKnown RBP2.42□□□□□ -2.02
VPS13B-207ENST00000518569 MRPS18BQ9Y676 258 aaKnown RBP2.42□□□□□ -2.02
VPS13B-207ENST00000518569 TUBGCP6Q96RT7 1819 aa2.42□□□□□ -2.02
VPS13B-207ENST00000518569 LAMC1P11047 1609 aa2.42□□□□□ -2.02
VPS13B-207ENST00000518569 TRPM2O94759 1503 aa2.42□□□□□ -2.02
VPS13B-207ENST00000518569 DLC1Q96QB1 1528 aa2.42□□□□□ -2.02
VPS13B-207ENST00000518569 PPIP5K1Q6PFW1 1433 aa2.42□□□□□ -2.02
VPS13B-207ENST00000518569 CROCC2H7BZ55 1655 aa2.41□□□□□ -2.02
VPS13B-207ENST00000518569 CCDC18Q5T9S5 1454 aa2.41□□□□□ -2.02
VPS13B-207ENST00000518569 PLEKHH2Q8IVE3 1493 aa2.41□□□□□ -2.02
VPS13B-207ENST00000518569 TMEM2Q9UHN6 1383 aa2.41□□□□□ -2.02
VPS13B-207ENST00000518569 CCDC160A6NGH7 325 aa2.41□□□□□ -2.02
VPS13B-207ENST00000518569 TVP23AA6NH52 213 aa2.41□□□□□ -2.02
VPS13B-207ENST00000518569 RFPL4AA6NLU0 287 aa2.41□□□□□ -2.02
VPS13B-207ENST00000518569 LYRM9A8MSI8 78 aa2.41□□□□□ -2.02
VPS13B-207ENST00000518569 FAM25AB3EWG3 89 aa2.41□□□□□ -2.02
VPS13B-207ENST00000518569 FAM25CB3EWG5 89 aa2.41□□□□□ -2.02
VPS13B-207ENST00000518569 FAM25GB3EWG6 89 aa2.41□□□□□ -2.02
VPS13B-207ENST00000518569 C21orf140B9A014 251 aa2.41□□□□□ -2.02
VPS13B-207ENST00000518569 F5H768 121 aa2.41□□□□□ -2.02
VPS13B-207ENST00000518569 RFPL4AL1F8VTS6 287 aa2.41□□□□□ -2.02
VPS13B-207ENST00000518569 CXCR6O00574 342 aa2.41□□□□□ -2.02
VPS13B-207ENST00000518569 UBDO15205 165 aa2.41□□□□□ -2.02
VPS13B-207ENST00000518569 ENSAO43768 121 aaKnown RBP2.41□□□□□ -2.02
VPS13B-207ENST00000518569 KLRC4O43908 158 aa2.41□□□□□ -2.02
VPS13B-207ENST00000518569 ENTPD6O75354 484 aa2.41□□□□□ -2.02
VPS13B-207ENST00000518569 MED6O75586 246 aa2.41□□□□□ -2.02
VPS13B-207ENST00000518569 CRHP06850 196 aa2.41□□□□□ -2.02
VPS13B-207ENST00000518569 CT62P0C5K7 136 aa2.41□□□□□ -2.02
VPS13B-207ENST00000518569 NBEAP1P0C6P0 100 aa2.41□□□□□ -2.02
VPS13B-207ENST00000518569 HIST1H1EP10412 219 aaKnown RBP2.41□□□□□ -2.02
VPS13B-207ENST00000518569 ZNF17P17021 662 aa2.41□□□□□ -2.02
VPS13B-207ENST00000518569 TBPP20226 339 aa2.41□□□□□ -2.02
VPS13B-207ENST00000518569 COX5AP20674 150 aa2.41□□□□□ -2.02
VPS13B-207ENST00000518569 COX7A1P24310 79 aa2.41□□□□□ -2.02
VPS13B-207ENST00000518569 HTR1DP28221 377 aa2.41□□□□□ -2.02
VPS13B-207ENST00000518569 PTGDSP41222 190 aa2.41□□□□□ -2.02
VPS13B-207ENST00000518569 RPS9P46781 194 aaKnown RBP2.41□□□□□ -2.02
VPS13B-207ENST00000518569 QARSP47897 775 aaKnown RBP2.41□□□□□ -2.02
VPS13B-207ENST00000518569 RAB7AP51149 207 aa2.41□□□□□ -2.02
VPS13B-207ENST00000518569 SSR4P51571 173 aa2.41□□□□□ -2.02
VPS13B-207ENST00000518569 FBXW4P57775 412 aa2.41□□□□□ -2.02
VPS13B-207ENST00000518569 VSX2P58304 361 aaPredicted RBP2.41□□□□□ -2.02
VPS13B-207ENST00000518569 UBE2MP61081 183 aaKnown RBP2.41□□□□□ -2.02
VPS13B-207ENST00000518569 TWF1Q12792 350 aa2.41□□□□□ -2.02
VPS13B-207ENST00000518569 UNC119Q13432 240 aa2.41□□□□□ -2.02
VPS13B-207ENST00000518569 SLC39A6Q13433 755 aa2.41□□□□□ -2.02
VPS13B-207ENST00000518569 ARFRP1Q13795 201 aa2.41□□□□□ -2.02
VPS13B-207ENST00000518569 EDDM3AQ14507 147 aa2.41□□□□□ -2.02
VPS13B-207ENST00000518569 GPNMBQ14956 572 aa2.41□□□□□ -2.02
VPS13B-207ENST00000518569 NSDHLQ15738 373 aa2.41□□□□□ -2.02
VPS13B-207ENST00000518569 CLEC12BQ2HXU8 276 aa2.41□□□□□ -2.02
VPS13B-207ENST00000518569 DEFB115Q30KQ5 88 aa2.41□□□□□ -2.02
VPS13B-207ENST00000518569 CEACAM21Q3KPI0 293 aa2.41□□□□□ -2.02
VPS13B-207ENST00000518569 ARHGAP11BQ3KRB8 267 aa2.41□□□□□ -2.02
VPS13B-207ENST00000518569 ZNF658BQ4V348 819 aaPredicted RBP2.41□□□□□ -2.02
VPS13B-207ENST00000518569 CPTPQ5TA50 214 aa2.41□□□□□ -2.02
VPS13B-207ENST00000518569 N4BP2L1Q5TBK1 243 aaPredicted RBP2.41□□□□□ -2.02
VPS13B-207ENST00000518569 HIST2H3PS2Q5TEC6 136 aa2.41□□□□□ -2.02
VPS13B-207ENST00000518569 UBE2UQ5VVX9 321 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms