RNA–Protein interactions for RNA: ENST00000515588.1

SERF1B-208, Transcript of small EDRK-rich factor 1B, humanhuman

TSL 2 BASIC

Gene SERF1B, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1B-208ENST00000515588 SLC9A3R2Q15599 337 aa12.93□□□□□ -0.34
SERF1B-208ENST00000515588 LHFPL2Q6ZUX7 228 aa12.93□□□□□ -0.34
SERF1B-208ENST00000515588 C8orf59Q8N0T1 100 aaPredicted RBP12.93□□□□□ -0.34
SERF1B-208ENST00000515588 OR13C9Q8NGT0 318 aa12.93□□□□□ -0.34
SERF1B-208ENST00000515588 TFAP2CQ92754 450 aa12.93□□□□□ -0.34
SERF1B-208ENST00000515588 TNFRSF14Q92956 283 aa12.93□□□□□ -0.34
SERF1B-208ENST00000515588 RFT1Q96AA3 541 aa12.93□□□□□ -0.34
SERF1B-208ENST00000515588 SPSB1Q96BD6 273 aa12.93□□□□□ -0.34
SERF1B-208ENST00000515588 TMEM80Q96HE8 168 aa12.93□□□□□ -0.34
SERF1B-208ENST00000515588 OPALINQ96PE5 141 aa12.93□□□□□ -0.34
SERF1B-208ENST00000515588 SPACA5Q96QH8 159 aa12.93□□□□□ -0.34
SERF1B-208ENST00000515588 C19orf12Q9NSK7 152 aa12.93□□□□□ -0.34
SERF1B-208ENST00000515588 TRBV23-1A0A0A0MS06 115 aa12.92□□□□□ -0.34
SERF1B-208ENST00000515588 IGKV1-12A0A0C4DH73 117 aa12.92□□□□□ -0.34
SERF1B-208ENST00000515588 A0A1W2PQ09 198 aa12.92□□□□□ -0.34
SERF1B-208ENST00000515588 IRGMA1A4Y4 181 aa12.92□□□□□ -0.34
SERF1B-208ENST00000515588 ERICH4A6NGS2 130 aa12.92□□□□□ -0.34
SERF1B-208ENST00000515588 RNASEK-C17orf49H0YIS7 233 aa12.92□□□□□ -0.34
SERF1B-208ENST00000515588 SLC1A7O00341 560 aa12.92□□□□□ -0.34
SERF1B-208ENST00000515588 XPNPEP2O43895 674 aa12.92□□□□□ -0.34
SERF1B-208ENST00000515588 IGKV1D-12P01611 117 aa12.92□□□□□ -0.34
SERF1B-208ENST00000515588 BCL3P20749 454 aa12.92□□□□□ -0.34
SERF1B-208ENST00000515588 POU3F4P49335 361 aa12.92□□□□□ -0.34
SERF1B-208ENST00000515588 COL10A1Q03692 680 aa12.92□□□□□ -0.34
SERF1B-208ENST00000515588 PDZK1IP1Q13113 114 aa12.92□□□□□ -0.34
SERF1B-208ENST00000515588 CDK5R1Q15078 307 aa12.92□□□□□ -0.34
SERF1B-208ENST00000515588 CCDC58Q4VC31 144 aa12.92□□□□□ -0.34
SERF1B-208ENST00000515588 ASPHD2Q6ICH7 369 aa12.92□□□□□ -0.34
SERF1B-208ENST00000515588 RPL22L1Q6P5R6 122 aaKnown RBP12.92□□□□□ -0.34
SERF1B-208ENST00000515588 CMTM4Q8IZR5 234 aa12.92□□□□□ -0.34
SERF1B-208ENST00000515588 PARP16Q8N5Y8 322 aa12.92□□□□□ -0.34
SERF1B-208ENST00000515588 ZNF485Q8NCK3 441 aa12.92□□□□□ -0.34
SERF1B-208ENST00000515588 HAVCR2Q8TDQ0 301 aa12.92□□□□□ -0.34
SERF1B-208ENST00000515588 GATAD2BQ8WXI9 593 aa12.92□□□□□ -0.34
SERF1B-208ENST00000515588 COMMD4Q9H0A8 199 aa12.92□□□□□ -0.34
SERF1B-208ENST00000515588 ZCCHC4Q9H5U6 513 aa12.92□□□□□ -0.34
SERF1B-208ENST00000515588 RBFOX1Q9NWB1 397 aaKnown RBP12.92□□□□□ -0.34
SERF1B-208ENST00000515588 EXOSC1Q9Y3B2 195 aaKnown RBP12.92□□□□□ -0.34
SERF1B-208ENST00000515588 TMEM89A2RUT3 159 aa12.91□□□□□ -0.34
SERF1B-208ENST00000515588 CLDN34H7C241 214 aa12.91□□□□□ -0.34
SERF1B-208ENST00000515588 K7N7A8 449 aa12.91□□□□□ -0.34
SERF1B-208ENST00000515588 M0R1W7 72 aa12.91□□□□□ -0.34
SERF1B-208ENST00000515588 OGG1O15527 345 aa12.91□□□□□ -0.34
SERF1B-208ENST00000515588 ANGPTL7O43827 346 aa12.91□□□□□ -0.34
SERF1B-208ENST00000515588 ZNF737O75373 536 aa12.91□□□□□ -0.34
SERF1B-208ENST00000515588 TK1P04183 234 aa12.91□□□□□ -0.34
SERF1B-208ENST00000515588 CALCBP10092 127 aa12.91□□□□□ -0.34
SERF1B-208ENST00000515588 MYL12AP19105 171 aa12.91□□□□□ -0.34
SERF1B-208ENST00000515588 ACTG1P63261 375 aa12.91□□□□□ -0.34
SERF1B-208ENST00000515588 ST3GAL4Q11206 333 aa12.91□□□□□ -0.34
SERF1B-208ENST00000515588 KLRD1Q13241 179 aa12.91□□□□□ -0.34
SERF1B-208ENST00000515588 METAP1DQ6UB28 335 aaPredicted RBP12.91□□□□□ -0.34
SERF1B-208ENST00000515588 TMPRSS11AQ6ZMR5 421 aa12.91□□□□□ -0.34
SERF1B-208ENST00000515588 C1orf122Q6ZSJ8 110 aa12.91□□□□□ -0.34
SERF1B-208ENST00000515588 MKXQ8IYA7 352 aa12.91□□□□□ -0.34
SERF1B-208ENST00000515588 FAM185AQ8N0U4 392 aa12.91□□□□□ -0.34
SERF1B-208ENST00000515588 OR4M1Q8NGD0 313 aa12.91□□□□□ -0.34
SERF1B-208ENST00000515588 EMG1Q92979 244 aaKnown RBP12.91□□□□□ -0.34
SERF1B-208ENST00000515588 BABAM2Q9NXR7 383 aa12.91□□□□□ -0.34
SERF1B-208ENST00000515588 PSORS1C1Q9UIG5 152 aa12.91□□□□□ -0.34
SERF1B-208ENST00000515588 DHDHQ9UQ10 334 aa12.91□□□□□ -0.34
SERF1B-208ENST00000515588 A0A0U1RQK1 487 aa12.9□□□□□ -0.34
SERF1B-208ENST00000515588 TMEM82A0PJX8 343 aa12.9□□□□□ -0.34
SERF1B-208ENST00000515588 HOXA3O43365 443 aaPredicted RBP12.9□□□□□ -0.34
SERF1B-208ENST00000515588 ALX3O95076 343 aa12.9□□□□□ -0.34
SERF1B-208ENST00000515588 RNASE1P07998 156 aaKnown RBP12.9□□□□□ -0.34
SERF1B-208ENST00000515588 RPSAP08865 295 aaKnown RBP12.9□□□□□ -0.34
SERF1B-208ENST00000515588 PIPP12273 146 aaPredicted RBP12.9□□□□□ -0.34
SERF1B-208ENST00000515588 SOX2P48431 317 aa12.9□□□□□ -0.34
SERF1B-208ENST00000515588 RPL31P62899 125 aaKnown RBP12.9□□□□□ -0.34
SERF1B-208ENST00000515588 DOC2BQ14184 412 aa12.9□□□□□ -0.34
SERF1B-208ENST00000515588 TMEM200BQ69YZ2 307 aa12.9□□□□□ -0.34
SERF1B-208ENST00000515588 ZNF529Q6P280 563 aa12.9□□□□□ -0.34
SERF1B-208ENST00000515588 Q6YL49 198 aa12.9□□□□□ -0.34
SERF1B-208ENST00000515588 SERPINA12Q8IW75 414 aa12.9□□□□□ -0.34
SERF1B-208ENST00000515588 FAM58AQ8N1B3 248 aa12.9□□□□□ -0.34
SERF1B-208ENST00000515588 C11orf42Q8N5U0 333 aa12.9□□□□□ -0.34
SERF1B-208ENST00000515588 OR51A2Q8NGJ7 313 aa12.9□□□□□ -0.34
SERF1B-208ENST00000515588 OR5D18Q8NGL1 313 aa12.9□□□□□ -0.34
SERF1B-208ENST00000515588 OR5D14Q8NGL3 314 aa12.9□□□□□ -0.34
SERF1B-208ENST00000515588 OR52N1Q8NH53 320 aa12.9□□□□□ -0.34
SERF1B-208ENST00000515588 TSEN15Q8WW01 171 aaKnown RBP12.9□□□□□ -0.34
SERF1B-208ENST00000515588 GCDHQ92947 438 aaPredicted RBP12.9□□□□□ -0.34
SERF1B-208ENST00000515588 ZDHHC16Q969W1 377 aa12.9□□□□□ -0.34
SERF1B-208ENST00000515588 FAM234AQ9H0X4 552 aa12.9□□□□□ -0.34
SERF1B-208ENST00000515588 VCXQ9H320 206 aa12.9□□□□□ -0.34
SERF1B-208ENST00000515588 METTL8Q9H825 291 aaKnown RBP12.9□□□□□ -0.34
SERF1B-208ENST00000515588 UNKLQ9H9P5 680 aaKnown RBP12.9□□□□□ -0.34
SERF1B-208ENST00000515588 PLCXD1Q9NUJ7 323 aa12.9□□□□□ -0.34
SERF1B-208ENST00000515588 EFCAB10A6NFE3 127 aa12.89□□□□□ -0.35
SERF1B-208ENST00000515588 SULT1B1O43704 296 aa12.89□□□□□ -0.35
SERF1B-208ENST00000515588 CHRM2P08172 466 aa12.89□□□□□ -0.35
SERF1B-208ENST00000515588 MELTFP08582 738 aa12.89□□□□□ -0.35
SERF1B-208ENST00000515588 OCM2P0CE71 109 aa12.89□□□□□ -0.35
SERF1B-208ENST00000515588 OCMP0CE72 109 aaPredicted RBP12.89□□□□□ -0.35
SERF1B-208ENST00000515588 DUSP1P28562 367 aa12.89□□□□□ -0.35
SERF1B-208ENST00000515588 C21orf33P30042 268 aaPredicted RBP12.89□□□□□ -0.35
SERF1B-208ENST00000515588 COMPP49747 757 aaPredicted RBP12.89□□□□□ -0.35
SERF1B-208ENST00000515588 AQP4P55087 323 aa12.89□□□□□ -0.35
SERF1B-208ENST00000515588 ERVFRD-1P60508 538 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms