RNA–Protein interactions for RNA: ENST00000515460.5

NUP54-218, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 849 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-218ENST00000515460 LYG1Q8N1E2 194 aa4.74□□□□□ -1.65
NUP54-218ENST00000515460 FAM86B1Q8N7N1 296 aa4.74□□□□□ -1.65
NUP54-218ENST00000515460 SIDT2Q8NBJ9 832 aaKnown RBP4.74□□□□□ -1.65
NUP54-218ENST00000515460 ZNF738Q8NE65 137 aa4.74□□□□□ -1.65
NUP54-218ENST00000515460 OR11H1Q8NG94 326 aa4.74□□□□□ -1.65
NUP54-218ENST00000515460 OR10H4Q8NGA5 316 aa4.74□□□□□ -1.65
NUP54-218ENST00000515460 OR4S1Q8NGB4 309 aa4.74□□□□□ -1.65
NUP54-218ENST00000515460 OR52B6Q8NGF0 335 aa4.74□□□□□ -1.65
NUP54-218ENST00000515460 OR51G2Q8NGK0 314 aa4.74□□□□□ -1.65
NUP54-218ENST00000515460 OR4D5Q8NGN0 318 aa4.74□□□□□ -1.65
NUP54-218ENST00000515460 OR1J1Q8NGS3 322 aa4.74□□□□□ -1.65
NUP54-218ENST00000515460 OR11H2Q8NH07 326 aa4.74□□□□□ -1.65
NUP54-218ENST00000515460 STT3BQ8TCJ2 826 aa4.74□□□□□ -1.65
NUP54-218ENST00000515460 RNF133Q8WVZ7 376 aa4.74□□□□□ -1.65
NUP54-218ENST00000515460 IGFBPL1Q8WX77 278 aa4.74□□□□□ -1.65
NUP54-218ENST00000515460 CACNG8Q8WXS5 425 aa4.74□□□□□ -1.65
NUP54-218ENST00000515460 GLYATL1Q969I3 302 aa4.74□□□□□ -1.65
NUP54-218ENST00000515460 PNPLA2Q96AD5 504 aa4.74□□□□□ -1.65
NUP54-218ENST00000515460 CXorf40BQ96DE9 158 aa4.74□□□□□ -1.65
NUP54-218ENST00000515460 IMP4Q96G21 291 aaKnown RBP4.74□□□□□ -1.65
NUP54-218ENST00000515460 SLC35E1Q96K37 410 aa4.74□□□□□ -1.65
NUP54-218ENST00000515460 LYZL4Q96KX0 146 aa4.74□□□□□ -1.65
NUP54-218ENST00000515460 ZNF583Q96ND8 569 aa4.74□□□□□ -1.65
NUP54-218ENST00000515460 CLCC1Q96S66 551 aa4.74□□□□□ -1.65
NUP54-218ENST00000515460 C20orf144Q9BQM9 153 aa4.74□□□□□ -1.65
NUP54-218ENST00000515460 TIMM29Q9BSF4 260 aa4.74□□□□□ -1.65
NUP54-218ENST00000515460 OR2J1Q9GZK6 312 aa4.74□□□□□ -1.65
NUP54-218ENST00000515460 SLC5A7Q9GZV3 580 aa4.74□□□□□ -1.65
NUP54-218ENST00000515460 MAGT1Q9H0U3 335 aa4.74□□□□□ -1.65
NUP54-218ENST00000515460 RAB1BQ9H0U4 201 aa4.74□□□□□ -1.65
NUP54-218ENST00000515460 ACKR4Q9NPB9 350 aa4.74□□□□□ -1.65
NUP54-218ENST00000515460 NGBQ9NPG2 151 aa4.74□□□□□ -1.65
NUP54-218ENST00000515460 YAE1D1Q9NRH1 226 aa4.74□□□□□ -1.65
NUP54-218ENST00000515460 LYRM2Q9NU23 88 aaPredicted RBP4.74□□□□□ -1.65
NUP54-218ENST00000515460 TAS2R13Q9NYV9 303 aa4.74□□□□□ -1.65
NUP54-218ENST00000515460 RPS6KB2Q9UBS0 482 aa4.74□□□□□ -1.65
NUP54-218ENST00000515460 GSTK1Q9Y2Q3 226 aa4.74□□□□□ -1.65
NUP54-218ENST00000515460 UBE2J1Q9Y385 318 aaPredicted RBP4.74□□□□□ -1.65
NUP54-218ENST00000515460 EXOSC1Q9Y3B2 195 aaKnown RBP4.74□□□□□ -1.65
NUP54-218ENST00000515460 SCN8AQ9UQD0 1980 aa4.74□□□□□ -1.65
NUP54-218ENST00000515460 LRP4O75096 1905 aa4.74□□□□□ -1.65
NUP54-218ENST00000515460 LOC105371242A0A075B767 164 aa4.73□□□□□ -1.65
NUP54-218ENST00000515460 KCNE1BA0A087WTH5 132 aa4.73□□□□□ -1.65
NUP54-218ENST00000515460 A0A1B0GW15 77 aa4.73□□□□□ -1.65
NUP54-218ENST00000515460 HELTA6NFD8 242 aa4.73□□□□□ -1.65
NUP54-218ENST00000515460 OR5H14A6NHG9 310 aa4.73□□□□□ -1.65
NUP54-218ENST00000515460 C3orf70A6NLC5 250 aaPredicted RBP4.73□□□□□ -1.65
NUP54-218ENST00000515460 A6NNC1 897 aa4.73□□□□□ -1.65
NUP54-218ENST00000515460 E9PQ18 207 aa4.73□□□□□ -1.65
NUP54-218ENST00000515460 SDHDO14521 159 aa4.73□□□□□ -1.65
NUP54-218ENST00000515460 GNGT2O14610 69 aa4.73□□□□□ -1.65
NUP54-218ENST00000515460 CCL25O15444 150 aa4.73□□□□□ -1.65
NUP54-218ENST00000515460 BCL2L11O43521 198 aa4.73□□□□□ -1.65
NUP54-218ENST00000515460 LDB2O43679 373 aa4.73□□□□□ -1.65
NUP54-218ENST00000515460 CTSVO60911 334 aa4.73□□□□□ -1.65
NUP54-218ENST00000515460 ADAP1O75689 374 aa4.73□□□□□ -1.65
NUP54-218ENST00000515460 ZNF432O94892 652 aa4.73□□□□□ -1.65
NUP54-218ENST00000515460 PROSCO94903 275 aa4.73□□□□□ -1.65
NUP54-218ENST00000515460 GZMBP10144 247 aa4.73□□□□□ -1.65
NUP54-218ENST00000515460 GZMHP20718 246 aa4.73□□□□□ -1.65
NUP54-218ENST00000515460 PTGER4P35408 488 aa4.73□□□□□ -1.65
NUP54-218ENST00000515460 GPR12P47775 334 aa4.73□□□□□ -1.65
NUP54-218ENST00000515460 SOX2P48431 317 aa4.73□□□□□ -1.65
NUP54-218ENST00000515460 GSK3BP49841 420 aa4.73□□□□□ -1.65
NUP54-218ENST00000515460 AGTR2P50052 363 aa4.73□□□□□ -1.65
NUP54-218ENST00000515460 RAB28P51157 221 aa4.73□□□□□ -1.65
NUP54-218ENST00000515460 ZNF84P51523 738 aa4.73□□□□□ -1.65
NUP54-218ENST00000515460 CRYBA4P53673 196 aa4.73□□□□□ -1.65
NUP54-218ENST00000515460 GEMP55040 296 aa4.73□□□□□ -1.65
NUP54-218ENST00000515460 F2RL1P55085 397 aa4.73□□□□□ -1.65
NUP54-218ENST00000515460 RPS15P62841 145 aaKnown RBP4.73□□□□□ -1.65
NUP54-218ENST00000515460 TSNQ15631 228 aaKnown RBP4.73□□□□□ -1.65
NUP54-218ENST00000515460 PRTGQ2VWP7 1150 aa4.73□□□□□ -1.65
NUP54-218ENST00000515460 COX19Q49B96 90 aa4.73□□□□□ -1.65
NUP54-218ENST00000515460 OR2G6Q5TZ20 316 aa4.73□□□□□ -1.65
NUP54-218ENST00000515460 PRR27Q6MZM9 219 aa4.73□□□□□ -1.65
NUP54-218ENST00000515460 CNIH2Q6PI25 160 aa4.73□□□□□ -1.65
NUP54-218ENST00000515460 TRAT1Q6PIZ9 186 aa4.73□□□□□ -1.65
NUP54-218ENST00000515460 FIGLAQ6QHK4 219 aa4.73□□□□□ -1.65
NUP54-218ENST00000515460 DRAM2Q6UX65 266 aa4.73□□□□□ -1.65
NUP54-218ENST00000515460 UNQ9370/PRO34162Q6UXP9 181 aa4.73□□□□□ -1.65
NUP54-218ENST00000515460 ZNF730Q6ZMV8 503 aa4.73□□□□□ -1.65
NUP54-218ENST00000515460 SPATA19Q7Z5L4 167 aa4.73□□□□□ -1.65
NUP54-218ENST00000515460 AMZ2Q86W34 360 aa4.73□□□□□ -1.65
NUP54-218ENST00000515460 LAS2Q8IYD9 372 aa4.73□□□□□ -1.65
NUP54-218ENST00000515460 KDM8Q8N371 416 aa4.73□□□□□ -1.65
NUP54-218ENST00000515460 TMEM156Q8N614 296 aa4.73□□□□□ -1.65
NUP54-218ENST00000515460 RBMXL3Q8N7X1 1067 aaKnown RBP4.73□□□□□ -1.65
NUP54-218ENST00000515460 CYB561A3Q8NBI2 242 aa4.73□□□□□ -1.65
NUP54-218ENST00000515460 NECAP1Q8NC96 275 aa4.73□□□□□ -1.65
NUP54-218ENST00000515460 FDCSPQ8NFU4 85 aa4.73□□□□□ -1.65
NUP54-218ENST00000515460 OR4K5Q8NGD3 323 aa4.73□□□□□ -1.65
NUP54-218ENST00000515460 OR1K1Q8NGR3 316 aa4.73□□□□□ -1.65
NUP54-218ENST00000515460 OR13C5Q8NGS8 318 aa4.73□□□□□ -1.65
NUP54-218ENST00000515460 THAP4Q8WY91 577 aa4.73□□□□□ -1.65
NUP54-218ENST00000515460 SMPDL3BQ92485 455 aa4.73□□□□□ -1.65
NUP54-218ENST00000515460 SLC25A28Q96A46 364 aa4.73□□□□□ -1.65
NUP54-218ENST00000515460 ZNF501Q96CX3 271 aaPredicted RBP4.73□□□□□ -1.65
NUP54-218ENST00000515460 REEP6Q96HR9 211 aa4.73□□□□□ -1.65
NUP54-218ENST00000515460 AKR1E2Q96JD6 320 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms