RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 MRPL2Q5T653 305 aaKnown RBP2.36□□□□□ -2.03
HMGCS1-207ENST00000514610 C6orf183Q5T699 404 aa2.36□□□□□ -2.03
HMGCS1-207ENST00000514610 SLC25A25Q6KCM7 469 aa2.36□□□□□ -2.03
HMGCS1-207ENST00000514610 TMEM144Q7Z5S9 345 aa2.36□□□□□ -2.03
HMGCS1-207ENST00000514610 GAPTQ8N292 157 aa2.36□□□□□ -2.03
HMGCS1-207ENST00000514610 OR13C9Q8NGT0 318 aa2.36□□□□□ -2.03
HMGCS1-207ENST00000514610 OR5H2Q8NGV7 314 aa2.36□□□□□ -2.03
HMGCS1-207ENST00000514610 PPP1R36Q96LQ0 422 aa2.36□□□□□ -2.03
HMGCS1-207ENST00000514610 NAP1L5Q96NT1 182 aaPredicted RBP2.36□□□□□ -2.03
HMGCS1-207ENST00000514610 OR2V2Q96R30 315 aa2.36□□□□□ -2.03
HMGCS1-207ENST00000514610 OR2A7Q96R45 310 aa2.36□□□□□ -2.03
HMGCS1-207ENST00000514610 TM6SF2Q9BZW4 377 aa2.36□□□□□ -2.03
HMGCS1-207ENST00000514610 INIPQ9NRY2 104 aa2.36□□□□□ -2.03
HMGCS1-207ENST00000514610 AP3M1Q9Y2T2 418 aa2.36□□□□□ -2.03
HMGCS1-207ENST00000514610 AQRO60306 1485 aaKnown RBP eCLIP2.36□□□□□ -2.032e-13■■■■□ 22.7
HMGCS1-207ENST00000514610 ZSWIM8A7E2V4 1837 aa2.35□□□□□ -2.03
HMGCS1-207ENST00000514610 SLC5A10A0PJK1 596 aa2.35□□□□□ -2.03
HMGCS1-207ENST00000514610 PRMT5O14744 637 aaPredicted RBP2.35□□□□□ -2.03
HMGCS1-207ENST00000514610 CBR3O75828 277 aa2.35□□□□□ -2.03
HMGCS1-207ENST00000514610 CSTAP01040 98 aa2.35□□□□□ -2.03
HMGCS1-207ENST00000514610 SNRPAP09012 282 aaKnown RBP2.35□□□□□ -2.03
HMGCS1-207ENST00000514610 IHHQ14623 411 aa2.35□□□□□ -2.03
HMGCS1-207ENST00000514610 CLLU1OSQ5K130 101 aa2.35□□□□□ -2.03
HMGCS1-207ENST00000514610 SYT6Q5T7P8 510 aaPredicted RBP2.35□□□□□ -2.03
HMGCS1-207ENST00000514610 ZNF660Q6AZW8 331 aaPredicted RBP2.35□□□□□ -2.03
HMGCS1-207ENST00000514610 CLEC18BQ6UXF7 455 aa2.35□□□□□ -2.03
HMGCS1-207ENST00000514610 NELFCDQ8IXH7 590 aa2.35□□□□□ -2.03
HMGCS1-207ENST00000514610 ASCC1Q8N9N2 400 aaKnown RBP2.35□□□□□ -2.03
HMGCS1-207ENST00000514610 MITD1Q8WV92 249 aa2.35□□□□□ -2.03
HMGCS1-207ENST00000514610 YIPF5Q969M3 257 aa2.35□□□□□ -2.03
HMGCS1-207ENST00000514610 THTPAQ9BU02 230 aa2.35□□□□□ -2.03
HMGCS1-207ENST00000514610 BEX2Q9BXY8 128 aa2.35□□□□□ -2.03
HMGCS1-207ENST00000514610 PLA2G12AQ9BZM1 189 aa2.35□□□□□ -2.03
HMGCS1-207ENST00000514610 C12orf4Q9NQ89 552 aa2.35□□□□□ -2.03
HMGCS1-207ENST00000514610 PARP11Q9NR21 331 aa2.35□□□□□ -2.03
HMGCS1-207ENST00000514610 ZNF230Q9UIE0 474 aaPredicted RBP2.35□□□□□ -2.03
HMGCS1-207ENST00000514610 INSIG2Q9Y5U4 225 aa2.35□□□□□ -2.03
HMGCS1-207ENST00000514610 PRR14LQ5THK1 2151 aa2.34□□□□□ -2.03
HMGCS1-207ENST00000514610 BAZ1BQ9UIG0 1483 aaKnown RBP2.34□□□□□ -2.03
HMGCS1-207ENST00000514610 IGLL5B9A064 214 aa2.34□□□□□ -2.03
HMGCS1-207ENST00000514610 C9JQL5 133 aa2.34□□□□□ -2.03
HMGCS1-207ENST00000514610 ZNF593O00488 134 aaPredicted RBP2.34□□□□□ -2.03
HMGCS1-207ENST00000514610 PTNP21246 168 aa2.34□□□□□ -2.03
HMGCS1-207ENST00000514610 KRTAP6-3Q3LI67 103 aa2.34□□□□□ -2.03
HMGCS1-207ENST00000514610 ZNF404Q494X3 552 aa2.34□□□□□ -2.03
HMGCS1-207ENST00000514610 CAVIN4Q5BKX8 364 aa2.34□□□□□ -2.03
HMGCS1-207ENST00000514610 ATPAF2Q8N5M1 289 aa2.34□□□□□ -2.03
HMGCS1-207ENST00000514610 OR52K1Q8NGK4 314 aa2.34□□□□□ -2.03
HMGCS1-207ENST00000514610 OR2K2Q8NGT1 345 aa2.34□□□□□ -2.03
HMGCS1-207ENST00000514610 ADTRPQ96IZ2 230 aa2.34□□□□□ -2.03
HMGCS1-207ENST00000514610 RILPQ96NA2 401 aa2.34□□□□□ -2.03
HMGCS1-207ENST00000514610 QKIQ96PU8 341 aaKnown RBP eCLIP2.34□□□□□ -2.03
HMGCS1-207ENST00000514610 RBM22Q9NW64 420 aaKnown RBP eCLIP2.34□□□□□ -2.03
HMGCS1-207ENST00000514610 STMN3Q9NZ72 180 aa2.34□□□□□ -2.03
HMGCS1-207ENST00000514610 ANXA10Q9UJ72 324 aa2.34□□□□□ -2.03
HMGCS1-207ENST00000514610 ACOT9Q9Y305 439 aa2.34□□□□□ -2.03
HMGCS1-207ENST00000514610 ZNF706Q9Y5V0 76 aaPredicted RBP2.34□□□□□ -2.03
HMGCS1-207ENST00000514610 TNIKQ9UKE5 1360 aa2.34□□□□□ -2.04
HMGCS1-207ENST00000514610 KIR2DS1A0A191URI9 304 aa2.33□□□□□ -2.04
HMGCS1-207ENST00000514610 LOC389332A0A1B0GUA5 103 aa2.33□□□□□ -2.04
HMGCS1-207ENST00000514610 ISLRO14498 428 aa2.33□□□□□ -2.04
HMGCS1-207ENST00000514610 ENTPD6O75354 484 aa2.33□□□□□ -2.04
HMGCS1-207ENST00000514610 CDK1P06493 297 aa2.33□□□□□ -2.04
HMGCS1-207ENST00000514610 TAC1P20366 129 aa2.33□□□□□ -2.04
HMGCS1-207ENST00000514610 GPR4P46093 362 aa2.33□□□□□ -2.04
HMGCS1-207ENST00000514610 SLC18A1P54219 525 aa2.33□□□□□ -2.04
HMGCS1-207ENST00000514610 KLF3P57682 345 aaPredicted RBP2.33□□□□□ -2.04
HMGCS1-207ENST00000514610 CARD18P57730 90 aa2.33□□□□□ -2.04
HMGCS1-207ENST00000514610 BIKQ13323 160 aa2.33□□□□□ -2.04
HMGCS1-207ENST00000514610 STK38Q15208 465 aa2.33□□□□□ -2.04
HMGCS1-207ENST00000514610 PDZD11Q5EBL8 140 aa2.33□□□□□ -2.04
HMGCS1-207ENST00000514610 FAM58AQ8N1B3 248 aa2.33□□□□□ -2.04
HMGCS1-207ENST00000514610 UBA3Q8TBC4 463 aa2.33□□□□□ -2.04
HMGCS1-207ENST00000514610 ZNF586Q9NXT0 402 aa2.33□□□□□ -2.04
HMGCS1-207ENST00000514610 RBM12B-AS1Q9P1G2 102 aa2.33□□□□□ -2.04
HMGCS1-207ENST00000514610 ZNF407Q9C0G0 2248 aa2.33□□□□□ -2.04
HMGCS1-207ENST00000514610 GSTTP1A0A1W2PQM5 241 aa2.32□□□□□ -2.04
HMGCS1-207ENST00000514610 OR2AT4A6NND4 320 aa2.32□□□□□ -2.04
HMGCS1-207ENST00000514610 H3BQ85 93 aa2.32□□□□□ -2.04
HMGCS1-207ENST00000514610 C15orf65H3BRN8 121 aa2.32□□□□□ -2.04
HMGCS1-207ENST00000514610 SC5DO75845 299 aa2.32□□□□□ -2.04
HMGCS1-207ENST00000514610 VAPBO95292 243 aa2.32□□□□□ -2.04
HMGCS1-207ENST00000514610 RLN2P04090 185 aa2.32□□□□□ -2.04
HMGCS1-207ENST00000514610 ARR3P36575 388 aa2.32□□□□□ -2.04
HMGCS1-207ENST00000514610 XIAPP98170 497 aa2.32□□□□□ -2.04
HMGCS1-207ENST00000514610 SSX1Q16384 188 aa2.32□□□□□ -2.04
HMGCS1-207ENST00000514610 TMEM241Q24JQ0 296 aa2.32□□□□□ -2.04
HMGCS1-207ENST00000514610 CEACAM16Q2WEN9 425 aa2.32□□□□□ -2.04
HMGCS1-207ENST00000514610 KRTAP25-1Q3LHN0 102 aa2.32□□□□□ -2.04
HMGCS1-207ENST00000514610 IDNKQ5T6J7 187 aa2.32□□□□□ -2.04
HMGCS1-207ENST00000514610 AMMECR1LQ6DCA0 310 aa2.32□□□□□ -2.04
HMGCS1-207ENST00000514610 ZNF470Q6ECI4 717 aa2.32□□□□□ -2.04
HMGCS1-207ENST00000514610 PID1Q7Z2X4 250 aa2.32□□□□□ -2.04
HMGCS1-207ENST00000514610 FAM19A1Q7Z5A9 133 aa2.32□□□□□ -2.04
HMGCS1-207ENST00000514610 SYS1Q8N2H4 156 aa2.32□□□□□ -2.04
HMGCS1-207ENST00000514610 OR6N2Q8NGY6 317 aa2.32□□□□□ -2.04
HMGCS1-207ENST00000514610 OR8S1Q8NH09 359 aa2.32□□□□□ -2.04
HMGCS1-207ENST00000514610 OTUB2Q96DC9 234 aa2.32□□□□□ -2.04
HMGCS1-207ENST00000514610 OR2M4Q96R27 311 aa2.32□□□□□ -2.04
HMGCS1-207ENST00000514610 PKMYT1Q99640 499 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms