RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 KIRREL1Q96J84 757 aa6.44□□□□□ -1.38
CLIP1-205ENST00000514271 FAM71F1Q96KD3 344 aaPredicted RBP6.44□□□□□ -1.38
CLIP1-205ENST00000514271 FAM173AQ9BQD7 235 aa6.44□□□□□ -1.38
CLIP1-205ENST00000514271 POTEKPQ9BYX7 375 aa6.44□□□□□ -1.38
CLIP1-205ENST00000514271 OR8D2Q9GZM6 311 aa6.44□□□□□ -1.38
CLIP1-205ENST00000514271 OR51V1Q9H2C8 321 aa6.44□□□□□ -1.38
CLIP1-205ENST00000514271 UNKLQ9H9P5 680 aaKnown RBP6.44□□□□□ -1.38
CLIP1-205ENST00000514271 CENPMQ9NSP4 180 aa6.44□□□□□ -1.38
CLIP1-205ENST00000514271 UPB1Q9UBR1 384 aa6.44□□□□□ -1.38
CLIP1-205ENST00000514271 TP53TG5Q9Y2B4 290 aa6.44□□□□□ -1.38
CLIP1-205ENST00000514271 IGLV3-32A0A0A0MS00 114 aa6.43□□□□□ -1.38
CLIP1-205ENST00000514271 KANTRA0A1W2PQU2 76 aa6.43□□□□□ -1.38
CLIP1-205ENST00000514271 UBE2QL1A1L167 161 aa6.43□□□□□ -1.38
CLIP1-205ENST00000514271 CST4P01036 141 aa6.43□□□□□ -1.38
CLIP1-205ENST00000514271 IFNA10P01566 189 aa6.43□□□□□ -1.38
CLIP1-205ENST00000514271 P04436 131 aa6.43□□□□□ -1.38
CLIP1-205ENST00000514271 ZNF43P17038 809 aa6.43□□□□□ -1.38
CLIP1-205ENST00000514271 NAA10P41227 235 aaPredicted RBP6.43□□□□□ -1.38
CLIP1-205ENST00000514271 NPY4RP50391 375 aa6.43□□□□□ -1.38
CLIP1-205ENST00000514271 TAS2R60P59551 318 aa6.43□□□□□ -1.38
CLIP1-205ENST00000514271 HIST1H3AP68431 136 aa6.43□□□□□ -1.38
CLIP1-205ENST00000514271 RBPJQ06330 500 aa6.43□□□□□ -1.38
CLIP1-205ENST00000514271 Q0VFX4 171 aa6.43□□□□□ -1.38
CLIP1-205ENST00000514271 CNN3Q15417 329 aaKnown RBP6.43□□□□□ -1.38
CLIP1-205ENST00000514271 CD226Q15762 336 aa6.43□□□□□ -1.38
CLIP1-205ENST00000514271 LBHQ53QV2 105 aaPredicted RBP6.43□□□□□ -1.38
CLIP1-205ENST00000514271 HIST2H3PS2Q5TEC6 136 aa6.43□□□□□ -1.38
CLIP1-205ENST00000514271 PRAMEF20Q5VT98 475 aa6.43□□□□□ -1.38
CLIP1-205ENST00000514271 HIST2H3AQ71DI3 136 aa6.43□□□□□ -1.38
CLIP1-205ENST00000514271 PRSS58Q8IYP2 241 aa6.43□□□□□ -1.38
CLIP1-205ENST00000514271 BEND2Q8NDZ0 799 aa6.43□□□□□ -1.38
CLIP1-205ENST00000514271 FDCSPQ8NFU4 85 aa6.43□□□□□ -1.38
CLIP1-205ENST00000514271 PLPPR1Q8TBJ4 325 aa6.43□□□□□ -1.38
CLIP1-205ENST00000514271 BSCL2Q96G97 398 aaPredicted RBP6.43□□□□□ -1.38
CLIP1-205ENST00000514271 SH2D2AQ9NP31 389 aa6.43□□□□□ -1.38
CLIP1-205ENST00000514271 NPIPA5A0A0B4J1W7 369 aa6.43□□□□□ -1.38
CLIP1-205ENST00000514271 TRAV1-1A0A0B4J248 108 aa6.43□□□□□ -1.38
CLIP1-205ENST00000514271 NPIPA7E9PJI5 369 aa6.43□□□□□ -1.38
CLIP1-205ENST00000514271 NPIPA8P0DM63 369 aa6.43□□□□□ -1.38
CLIP1-205ENST00000514271 RAB11BQ15907 218 aa6.43□□□□□ -1.38
CLIP1-205ENST00000514271 ALG10BQ5I7T1 473 aa6.43□□□□□ -1.38
CLIP1-205ENST00000514271 LINC00346Q8IVM7 164 aa6.43□□□□□ -1.38
CLIP1-205ENST00000514271 SLC26A10Q8NG04 563 aa6.43□□□□□ -1.38
CLIP1-205ENST00000514271 OR52R1Q8NGF1 315 aa6.43□□□□□ -1.38
CLIP1-205ENST00000514271 OR4D5Q8NGN0 318 aa6.43□□□□□ -1.38
CLIP1-205ENST00000514271 C2CD4CQ8TF44 421 aa6.43□□□□□ -1.38
CLIP1-205ENST00000514271 RASL10BQ96S79 203 aa6.43□□□□□ -1.38
CLIP1-205ENST00000514271 PARPBPQ9NWS1 579 aa6.43□□□□□ -1.38
CLIP1-205ENST00000514271 KPTNQ9Y664 436 aa6.43□□□□□ -1.38
CLIP1-205ENST00000514271 C7orf77A4D0Y5 90 aa6.42□□□□□ -1.38
CLIP1-205ENST00000514271 M0QYG6 137 aa6.42□□□□□ -1.38
CLIP1-205ENST00000514271 RAB3DO95716 219 aa6.42□□□□□ -1.38
CLIP1-205ENST00000514271 HLA-AP01891 365 aaKnown RBP6.42□□□□□ -1.38
CLIP1-205ENST00000514271 GTF2F2P13984 249 aa6.42□□□□□ -1.38
CLIP1-205ENST00000514271 HTR2CP28335 458 aa6.42□□□□□ -1.38
CLIP1-205ENST00000514271 LAP3P28838 519 aa6.42□□□□□ -1.38
CLIP1-205ENST00000514271 IL12BP29460 328 aa6.42□□□□□ -1.38
CLIP1-205ENST00000514271 PTGER4P35408 488 aa6.42□□□□□ -1.38
CLIP1-205ENST00000514271 DEFA5Q01523 94 aa6.42□□□□□ -1.38
CLIP1-205ENST00000514271 RPL18Q07020 188 aaKnown RBP6.42□□□□□ -1.38
CLIP1-205ENST00000514271 FABP9Q0Z7S8 132 aa6.42□□□□□ -1.38
CLIP1-205ENST00000514271 FAM189A2Q15884 450 aa6.42□□□□□ -1.38
CLIP1-205ENST00000514271 AWAT1Q58HT5 328 aa6.42□□□□□ -1.38
CLIP1-205ENST00000514271 C1QL3Q5VWW1 255 aa6.42□□□□□ -1.38
CLIP1-205ENST00000514271 REC114Q7Z4M0 266 aa6.42□□□□□ -1.38
CLIP1-205ENST00000514271 NAA40Q86UY6 237 aa6.42□□□□□ -1.38
CLIP1-205ENST00000514271 BCORP1Q8N888 145 aa6.42□□□□□ -1.38
CLIP1-205ENST00000514271 C16orf52Q8NHV5 167 aa6.42□□□□□ -1.38
CLIP1-205ENST00000514271 ABHD5Q8WTS1 349 aa6.42□□□□□ -1.38
CLIP1-205ENST00000514271 RNF133Q8WVZ7 376 aa6.42□□□□□ -1.38
CLIP1-205ENST00000514271 TAAR8Q969N4 342 aa6.42□□□□□ -1.38
CLIP1-205ENST00000514271 PPP1R14AQ96A00 147 aa6.42□□□□□ -1.38
CLIP1-205ENST00000514271 TSSK2Q96PF2 358 aa6.42□□□□□ -1.38
CLIP1-205ENST00000514271 ANGPTL4Q9BY76 406 aa6.42□□□□□ -1.38
CLIP1-205ENST00000514271 MRPL13Q9BYD1 178 aaKnown RBP6.42□□□□□ -1.38
CLIP1-205ENST00000514271 ACTR3CQ9C0K3 210 aaPredicted RBP6.42□□□□□ -1.38
CLIP1-205ENST00000514271 ASF1BQ9NVP2 202 aa6.42□□□□□ -1.38
CLIP1-205ENST00000514271 B9D1Q9UPM9 204 aa6.42□□□□□ -1.38
CLIP1-205ENST00000514271 R4GMQ9 66 aa6.42□□□□□ -1.38
CLIP1-205ENST00000514271 KNTC1P50748 2209 aa6.42□□□□□ -1.38
CLIP1-205ENST00000514271 TRBV23-1A0A0A0MS06 115 aa6.42□□□□□ -1.38
CLIP1-205ENST00000514271 A8MWP6 167 aa6.42□□□□□ -1.38
CLIP1-205ENST00000514271 CCSO14618 274 aa6.42□□□□□ -1.38
CLIP1-205ENST00000514271 ZNF208O43345 1280 aa6.42□□□□□ -1.38
CLIP1-205ENST00000514271 TSPAN2O60636 221 aa6.42□□□□□ -1.38
CLIP1-205ENST00000514271 SP1P08047 785 aa6.42□□□□□ -1.38
CLIP1-205ENST00000514271 TACSTD2P09758 323 aa6.42□□□□□ -1.38
CLIP1-205ENST00000514271 PLCXD2Q0VAA5 305 aa6.42□□□□□ -1.38
CLIP1-205ENST00000514271 ZNF766Q5HY98 468 aa6.42□□□□□ -1.38
CLIP1-205ENST00000514271 FAM180AQ6UWF9 173 aa6.42□□□□□ -1.38
CLIP1-205ENST00000514271 SHISA6Q6ZSJ9 500 aa6.42□□□□□ -1.38
CLIP1-205ENST00000514271 OR4S1Q8NGB4 309 aa6.42□□□□□ -1.38
CLIP1-205ENST00000514271 OR51F2Q8NH61 342 aa6.42□□□□□ -1.38
CLIP1-205ENST00000514271 EXTL1Q92935 676 aa6.42□□□□□ -1.38
CLIP1-205ENST00000514271 FOXRED1Q96CU9 486 aaPredicted RBP6.42□□□□□ -1.38
CLIP1-205ENST00000514271 CHMP1AQ9HD42 196 aaPredicted RBP6.42□□□□□ -1.38
CLIP1-205ENST00000514271 LRP12Q9Y561 859 aa6.42□□□□□ -1.38
CLIP1-205ENST00000514271 CRYM-AS1A6NIL9 109 aa6.42□□□□□ -1.38
CLIP1-205ENST00000514271 ZNF716A6NP11 495 aa6.42□□□□□ -1.38
CLIP1-205ENST00000514271 FADS1O60427 444 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms