RNA–Protein interactions for RNA: ENST00000513506.5

POLR2J3-218, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 958 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-218ENST00000513506 TRAPPC2LH3BP13 241 aa12.92□□□□□ -0.34
POLR2J3-218ENST00000513506 FOXH1O75593 365 aa12.92□□□□□ -0.34
POLR2J3-218ENST00000513506 NXPH2O95156 264 aa12.92□□□□□ -0.34
POLR2J3-218ENST00000513506 LY6G6DO95868 133 aa12.92□□□□□ -0.34
POLR2J3-218ENST00000513506 GYPAP02724 150 aa12.92□□□□□ -0.34
POLR2J3-218ENST00000513506 RPS2P15880 293 aaKnown RBP12.92□□□□□ -0.34
POLR2J3-218ENST00000513506 ZFP36P26651 326 aaKnown RBP12.92□□□□□ -0.34
POLR2J3-218ENST00000513506 NPBWR2P48146 333 aa12.92□□□□□ -0.34
POLR2J3-218ENST00000513506 PITPNBP48739 271 aa12.92□□□□□ -0.34
POLR2J3-218ENST00000513506 SPIN3Q5JUX0 258 aa12.92□□□□□ -0.34
POLR2J3-218ENST00000513506 WDR25Q64LD2 544 aaPredicted RBP12.92□□□□□ -0.34
POLR2J3-218ENST00000513506 FAM166AQ6J272 317 aa12.92□□□□□ -0.34
POLR2J3-218ENST00000513506 GDPGP1Q6ZNW5 385 aa12.92□□□□□ -0.34
POLR2J3-218ENST00000513506 SLC36A1Q7Z2H8 476 aa12.92□□□□□ -0.34
POLR2J3-218ENST00000513506 C1QL2Q7Z5L3 287 aa12.92□□□□□ -0.34
POLR2J3-218ENST00000513506 FAM58AQ8N1B3 248 aa12.92□□□□□ -0.34
POLR2J3-218ENST00000513506 C19orf18Q8NEA5 215 aa12.92□□□□□ -0.34
POLR2J3-218ENST00000513506 OR8B3Q8NGG8 313 aa12.92□□□□□ -0.34
POLR2J3-218ENST00000513506 OR51T1Q8NGJ9 327 aa12.92□□□□□ -0.34
POLR2J3-218ENST00000513506 SLAMF9Q96A28 289 aa12.92□□□□□ -0.34
POLR2J3-218ENST00000513506 POM121Q96HA1 1249 aa12.92□□□□□ -0.34
POLR2J3-218ENST00000513506 C1orf147Q96MC9 270 aaPredicted RBP12.92□□□□□ -0.34
POLR2J3-218ENST00000513506 ZNF488Q96MN9 340 aa12.92□□□□□ -0.34
POLR2J3-218ENST00000513506 GAFA1Q96PS6 74 aa12.92□□□□□ -0.34
POLR2J3-218ENST00000513506 OR8B2Q96RD0 313 aa12.92□□□□□ -0.34
POLR2J3-218ENST00000513506 NARFLQ9H6Q4 476 aa12.92□□□□□ -0.34
POLR2J3-218ENST00000513506 TCF7L1Q9HCS4 588 aa12.92□□□□□ -0.34
POLR2J3-218ENST00000513506 DNAJB11Q9UBS4 358 aa12.92□□□□□ -0.34
POLR2J3-218ENST00000513506 GHRLQ9UBU3 117 aa12.92□□□□□ -0.34
POLR2J3-218ENST00000513506 IGHV3OR15-7A0A075B7D8 119 aa12.91□□□□□ -0.34
POLR2J3-218ENST00000513506 SPRY1O43609 319 aaPredicted RBP12.91□□□□□ -0.34
POLR2J3-218ENST00000513506 ZNF780AO75290 641 aaPredicted RBP12.91□□□□□ -0.34
POLR2J3-218ENST00000513506 SFTPBP07988 381 aa12.91□□□□□ -0.34
POLR2J3-218ENST00000513506 GATA3P23771 443 aa12.91□□□□□ -0.34
POLR2J3-218ENST00000513506 LMO1P25800 156 aa12.91□□□□□ -0.34
POLR2J3-218ENST00000513506 PRDX2P32119 198 aa12.91□□□□□ -0.34
POLR2J3-218ENST00000513506 MTNR1BP49286 362 aa12.91□□□□□ -0.34
POLR2J3-218ENST00000513506 POU3F4P49335 361 aa12.91□□□□□ -0.34
POLR2J3-218ENST00000513506 PSMD7P51665 324 aa12.91□□□□□ -0.34
POLR2J3-218ENST00000513506 CAV3P56539 151 aa12.91□□□□□ -0.34
POLR2J3-218ENST00000513506 NEDD8Q15843 81 aa12.91□□□□□ -0.34
POLR2J3-218ENST00000513506 BOLLQ8N9W6 283 aaKnown RBP12.91□□□□□ -0.34
POLR2J3-218ENST00000513506 TBC1D15Q8TC07 691 aa12.91□□□□□ -0.34
POLR2J3-218ENST00000513506 TNFAIP8L1Q8WVP5 186 aa12.91□□□□□ -0.34
POLR2J3-218ENST00000513506 STUB1Q9UNE7 303 aa12.91□□□□□ -0.34
POLR2J3-218ENST00000513506 MAB21L2Q9Y586 359 aa12.91□□□□□ -0.34
POLR2J3-218ENST00000513506 SETD2Q9BYW2 2564 aaPredicted RBP12.91□□□□□ -0.34
POLR2J3-218ENST00000513506 SONP18583 2426 aaKnown RBP12.9□□□□□ -0.34
POLR2J3-218ENST00000513506 RFPL4AA6NLU0 287 aa12.9□□□□□ -0.34
POLR2J3-218ENST00000513506 RFPL4AL1F8VTS6 287 aa12.9□□□□□ -0.34
POLR2J3-218ENST00000513506 SLC22A1O15245 554 aa12.9□□□□□ -0.34
POLR2J3-218ENST00000513506 ADAM20O43506 726 aa12.9□□□□□ -0.34
POLR2J3-218ENST00000513506 ANGPTL7O43827 346 aa12.9□□□□□ -0.34
POLR2J3-218ENST00000513506 ZNF737O75373 536 aa12.9□□□□□ -0.34
POLR2J3-218ENST00000513506 ECDO95905 644 aaPredicted RBP12.9□□□□□ -0.34
POLR2J3-218ENST00000513506 TMEM225BP0DP42 221 aa12.9□□□□□ -0.34
POLR2J3-218ENST00000513506 BCL3P20749 454 aa12.9□□□□□ -0.34
POLR2J3-218ENST00000513506 FGF12P61328 243 aa12.9□□□□□ -0.34
POLR2J3-218ENST00000513506 SEC61A1P61619 476 aaKnown RBP12.9□□□□□ -0.34
POLR2J3-218ENST00000513506 IL13RA1P78552 427 aa12.9□□□□□ -0.34
POLR2J3-218ENST00000513506 ESCO2Q56NI9 601 aa12.9□□□□□ -0.34
POLR2J3-218ENST00000513506 GLT8D1Q68CQ7 371 aa12.9□□□□□ -0.34
POLR2J3-218ENST00000513506 CLEC9AQ6UXN8 241 aa12.9□□□□□ -0.34
POLR2J3-218ENST00000513506 ZNF561Q8N587 486 aa12.9□□□□□ -0.34
POLR2J3-218ENST00000513506 CD177Q8N6Q3 437 aa12.9□□□□□ -0.34
POLR2J3-218ENST00000513506 PNLDC1Q8NA58 520 aaKnown RBP12.9□□□□□ -0.34
POLR2J3-218ENST00000513506 LY6G5BQ8NDX9 201 aa12.9□□□□□ -0.34
POLR2J3-218ENST00000513506 RFT1Q96AA3 541 aa12.9□□□□□ -0.34
POLR2J3-218ENST00000513506 TMEM186Q96B77 213 aa12.9□□□□□ -0.34
POLR2J3-218ENST00000513506 YIPF6Q96EC8 236 aa12.9□□□□□ -0.34
POLR2J3-218ENST00000513506 MRPS24Q96EL2 167 aaKnown RBP12.9□□□□□ -0.34
POLR2J3-218ENST00000513506 CCL13Q99616 98 aa12.9□□□□□ -0.34
POLR2J3-218ENST00000513506 GFI1Q99684 422 aa12.9□□□□□ -0.34
POLR2J3-218ENST00000513506 SMR3AQ99954 134 aa12.9□□□□□ -0.34
POLR2J3-218ENST00000513506 SSBP3Q9BWW4 388 aaPredicted RBP12.9□□□□□ -0.34
POLR2J3-218ENST00000513506 FAM234AQ9H0X4 552 aa12.9□□□□□ -0.34
POLR2J3-218ENST00000513506 SLITRK2Q9H156 845 aa12.9□□□□□ -0.34
POLR2J3-218ENST00000513506 IFT22Q9H7X7 185 aa12.9□□□□□ -0.34
POLR2J3-218ENST00000513506 CNTD2Q9H8S5 307 aa12.9□□□□□ -0.34
POLR2J3-218ENST00000513506 SMURF1Q9HCE7 757 aa12.9□□□□□ -0.34
POLR2J3-218ENST00000513506 PCDHB16Q9NRJ7 776 aa12.9□□□□□ -0.34
POLR2J3-218ENST00000513506 RBFOX1Q9NWB1 397 aaKnown RBP12.9□□□□□ -0.34
POLR2J3-218ENST00000513506 CLN8Q9UBY8 286 aa12.9□□□□□ -0.34
POLR2J3-218ENST00000513506 TMPRSS2O15393 492 aa12.89□□□□□ -0.35
POLR2J3-218ENST00000513506 MAS1P04201 325 aa12.89□□□□□ -0.35
POLR2J3-218ENST00000513506 CD36P16671 472 aa12.89□□□□□ -0.35
POLR2J3-218ENST00000513506 CALRP27797 417 aaKnown RBP12.89□□□□□ -0.35
POLR2J3-218ENST00000513506 OR3A4PP47883 348 aa12.89□□□□□ -0.35
POLR2J3-218ENST00000513506 GPR176Q14439 515 aa12.89□□□□□ -0.35
POLR2J3-218ENST00000513506 IL13RA2Q14627 380 aa12.89□□□□□ -0.35
POLR2J3-218ENST00000513506 DGUOKQ16854 277 aa12.89□□□□□ -0.35
POLR2J3-218ENST00000513506 CD276Q5ZPR3 534 aa12.89□□□□□ -0.35
POLR2J3-218ENST00000513506 OR5T2Q8NGG2 359 aa12.89□□□□□ -0.35
POLR2J3-218ENST00000513506 OR5D18Q8NGL1 313 aa12.89□□□□□ -0.35
POLR2J3-218ENST00000513506 OR13F1Q8NGS4 319 aa12.89□□□□□ -0.35
POLR2J3-218ENST00000513506 C8orf46Q8TAG6 207 aa12.89□□□□□ -0.35
POLR2J3-218ENST00000513506 GPER1Q99527 375 aa12.89□□□□□ -0.35
POLR2J3-218ENST00000513506 GSX1Q9H4S2 264 aaPredicted RBP12.89□□□□□ -0.35
POLR2J3-218ENST00000513506 TXNL4BQ9NX01 149 aaKnown RBP12.89□□□□□ -0.35
POLR2J3-218ENST00000513506 KIR2DS1A0A191URI9 304 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms