RNA–Protein interactions for RNA: ENST00000513495.5

SH3TC1-223, Transcript of SH3 domain and tetratricopeptide repeats 1, human

TSL 4

Gene SH3TC1, Length 600 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SH3TC1-223	ENST00000513495	SLC36A1	Q7Z2H8	476 aa		13.19	□□□□□ -0.3
SH3TC1-223	ENST00000513495	RNF144B	Q7Z419	303 aa		13.19	□□□□□ -0.3
SH3TC1-223	ENST00000513495	KRTAP1-3	Q8IUG1	177 aa		13.19	□□□□□ -0.3
SH3TC1-223	ENST00000513495	BATF2	Q8N1L9	274 aa		13.19	□□□□□ -0.3
SH3TC1-223	ENST00000513495	C19orf18	Q8NEA5	215 aa		13.19	□□□□□ -0.3
SH3TC1-223	ENST00000513495	OR4D6	Q8NGJ1	314 aa		13.19	□□□□□ -0.3
SH3TC1-223	ENST00000513495	MRPS24	Q96EL2	167 aa	Known RBP	13.19	□□□□□ -0.3
SH3TC1-223	ENST00000513495	MED30	Q96HR3	178 aa		13.19	□□□□□ -0.3
SH3TC1-223	ENST00000513495	NKX3-1	Q99801	234 aa	Predicted RBP	13.19	□□□□□ -0.3
SH3TC1-223	ENST00000513495	TMEM246	Q9BRR3	403 aa		13.19	□□□□□ -0.3
SH3TC1-223	ENST00000513495	RNF167	Q9H6Y7	350 aa		13.19	□□□□□ -0.3
SH3TC1-223	ENST00000513495	HES4	Q9HCC6	221 aa		13.19	□□□□□ -0.3
SH3TC1-223	ENST00000513495	HMG20A	Q9NP66	347 aa		13.19	□□□□□ -0.3
SH3TC1-223	ENST00000513495	STEAP1	Q9UHE8	339 aa		13.19	□□□□□ -0.3
SH3TC1-223	ENST00000513495	PRRC2A	P48634	2157 aa	Known RBP	13.18	□□□□□ -0.3
SH3TC1-223	ENST00000513495	IGKV1-12	A0A0C4DH73	117 aa		13.18	□□□□□ -0.3
SH3TC1-223	ENST00000513495	RNF223	E7ERA6	249 aa		13.18	□□□□□ -0.3
SH3TC1-223	ENST00000513495		H3BUI4	141 aa		13.18	□□□□□ -0.3
SH3TC1-223	ENST00000513495	AIP	O00170	330 aa		13.18	□□□□□ -0.3
SH3TC1-223	ENST00000513495	ADAM20	O43506	726 aa		13.18	□□□□□ -0.3
SH3TC1-223	ENST00000513495	TMEM127	O75204	238 aa		13.18	□□□□□ -0.3
SH3TC1-223	ENST00000513495	CRTAP	O75718	401 aa	Predicted RBP	13.18	□□□□□ -0.3
SH3TC1-223	ENST00000513495	IGKV1D-12	P01611	117 aa		13.18	□□□□□ -0.3
SH3TC1-223	ENST00000513495	GYPA	P02724	150 aa		13.18	□□□□□ -0.3
SH3TC1-223	ENST00000513495	NPBWR2	P48146	333 aa		13.18	□□□□□ -0.3
SH3TC1-223	ENST00000513495	OR10A3	P58181	314 aa		13.18	□□□□□ -0.3
SH3TC1-223	ENST00000513495	FGF12	P61328	243 aa		13.18	□□□□□ -0.3
SH3TC1-223	ENST00000513495	NCS1	P62166	190 aa		13.18	□□□□□ -0.3
SH3TC1-223	ENST00000513495	HES5	Q5TA89	166 aa		13.18	□□□□□ -0.3
SH3TC1-223	ENST00000513495	CRIP3	Q6Q6R5	217 aa		13.18	□□□□□ -0.3
SH3TC1-223	ENST00000513495	SLC16A12	Q6ZSM3	486 aa		13.18	□□□□□ -0.3
SH3TC1-223	ENST00000513495	OSR2	Q8N2R0	312 aa		13.18	□□□□□ -0.3
SH3TC1-223	ENST00000513495	OR5T2	Q8NGG2	359 aa		13.18	□□□□□ -0.3
SH3TC1-223	ENST00000513495	OR8B3	Q8NGG8	313 aa		13.18	□□□□□ -0.3
SH3TC1-223	ENST00000513495	KCNG3	Q8TAE7	436 aa		13.18	□□□□□ -0.3
SH3TC1-223	ENST00000513495	NEIL1	Q96FI4	390 aa	Predicted RBP	13.18	□□□□□ -0.3
SH3TC1-223	ENST00000513495	OR8B2	Q96RD0	313 aa		13.18	□□□□□ -0.3
SH3TC1-223	ENST00000513495	MRI1	Q9BV20	369 aa		13.18	□□□□□ -0.3
SH3TC1-223	ENST00000513495	ZNF665	Q9H7R5	613 aa		13.18	□□□□□ -0.3
SH3TC1-223	ENST00000513495	OR14J1	Q9UGF5	321 aa		13.18	□□□□□ -0.3
SH3TC1-223	ENST00000513495	SHISA3	A0PJX4	238 aa		13.17	□□□□□ -0.3
SH3TC1-223	ENST00000513495	ANKHD1-EIF4EBP3	H7C0V5	636 aa	Predicted RBP	13.17	□□□□□ -0.3
SH3TC1-223	ENST00000513495	SH2D1B	O14796	132 aa		13.17	□□□□□ -0.3
SH3TC1-223	ENST00000513495	TMPRSS2	O15393	492 aa		13.17	□□□□□ -0.3
SH3TC1-223	ENST00000513495	SFTPB	P07988	381 aa		13.17	□□□□□ -0.3
SH3TC1-223	ENST00000513495	CD37	P11049	281 aa		13.17	□□□□□ -0.3
SH3TC1-223	ENST00000513495	IL13RA1	P78552	427 aa		13.17	□□□□□ -0.3
SH3TC1-223	ENST00000513495	LOXL1	Q08397	574 aa	Predicted RBP	13.17	□□□□□ -0.3
SH3TC1-223	ENST00000513495	HNRNPA0	Q13151	305 aa	Known RBP	13.17	□□□□□ -0.3
SH3TC1-223	ENST00000513495	P2RY14	Q15391	338 aa		13.17	□□□□□ -0.3
SH3TC1-223	ENST00000513495	FAM189A2	Q15884	450 aa		13.17	□□□□□ -0.3
SH3TC1-223	ENST00000513495	CTF1	Q16619	201 aa		13.17	□□□□□ -0.3
SH3TC1-223	ENST00000513495	STUM	Q69YW2	141 aa		13.17	□□□□□ -0.3
SH3TC1-223	ENST00000513495	SFXN4	Q6P4A7	337 aa		13.17	□□□□□ -0.3
SH3TC1-223	ENST00000513495	C1QL2	Q7Z5L3	287 aa		13.17	□□□□□ -0.3
SH3TC1-223	ENST00000513495	LINC00596	Q86U02	117 aa		13.17	□□□□□ -0.3
SH3TC1-223	ENST00000513495	LYPD6	Q86Y78	171 aa		13.17	□□□□□ -0.3
SH3TC1-223	ENST00000513495	OR10K1	Q8NGX5	313 aa		13.17	□□□□□ -0.3
SH3TC1-223	ENST00000513495	CLDND2	Q8NHS1	167 aa		13.17	□□□□□ -0.3
SH3TC1-223	ENST00000513495	GFI1	Q99684	422 aa		13.17	□□□□□ -0.3
SH3TC1-223	ENST00000513495	NAA50	Q9GZZ1	169 aa	Known RBP	13.17	□□□□□ -0.3
SH3TC1-223	ENST00000513495	NDUFA13	Q9P0J0	144 aa		13.17	□□□□□ -0.3
SH3TC1-223	ENST00000513495	DAPK2	Q9UIK4	370 aa		13.17	□□□□□ -0.3
SH3TC1-223	ENST00000513495	IGHV4-61	A0A0C4DH41	118 aa		13.16	□□□□□ -0.3
SH3TC1-223	ENST00000513495	SMIM30	A4D0T7	59 aa		13.16	□□□□□ -0.3
SH3TC1-223	ENST00000513495	RFPL4A	A6NLU0	287 aa		13.16	□□□□□ -0.3
SH3TC1-223	ENST00000513495	CEACAM18	A8MTB9	384 aa		13.16	□□□□□ -0.3
SH3TC1-223	ENST00000513495	RFPL4AL1	F8VTS6	287 aa		13.16	□□□□□ -0.3
SH3TC1-223	ENST00000513495		F8VVB4	439 aa		13.16	□□□□□ -0.3
SH3TC1-223	ENST00000513495		F8VWA3	439 aa		13.16	□□□□□ -0.3
SH3TC1-223	ENST00000513495	CHRM2	P08172	466 aa		13.16	□□□□□ -0.3
SH3TC1-223	ENST00000513495	PSG2	P11465	335 aa		13.16	□□□□□ -0.3
SH3TC1-223	ENST00000513495	CFP	P27918	469 aa		13.16	□□□□□ -0.3
SH3TC1-223	ENST00000513495	PRDX2	P32119	198 aa		13.16	□□□□□ -0.3
SH3TC1-223	ENST00000513495	RBMX	P38159	391 aa	Known RBP	13.16	□□□□□ -0.3
SH3TC1-223	ENST00000513495	SNU13	P55769	128 aa	Known RBP	13.16	□□□□□ -0.3
SH3TC1-223	ENST00000513495	ESCO2	Q56NI9	601 aa		13.16	□□□□□ -0.3
SH3TC1-223	ENST00000513495	ATPAF1	Q5TC12	328 aa	Predicted RBP	13.16	□□□□□ -0.3
SH3TC1-223	ENST00000513495	OR2W3	Q7Z3T1	314 aa		13.16	□□□□□ -0.3
SH3TC1-223	ENST00000513495	ZNF561	Q8N587	486 aa		13.16	□□□□□ -0.3
SH3TC1-223	ENST00000513495	PPP1R35	Q8TAP8	253 aa		13.16	□□□□□ -0.3
SH3TC1-223	ENST00000513495	FAM3D	Q96BQ1	224 aa		13.16	□□□□□ -0.3
SH3TC1-223	ENST00000513495	CCL13	Q99616	98 aa		13.16	□□□□□ -0.3
SH3TC1-223	ENST00000513495	URM1	Q9BTM9	101 aa	Known RBP	13.16	□□□□□ -0.3
SH3TC1-223	ENST00000513495	DCSTAMP	Q9H295	470 aa		13.16	□□□□□ -0.3
SH3TC1-223	ENST00000513495	PATZ1	Q9HBE1	687 aa	Known RBP	13.16	□□□□□ -0.3
SH3TC1-223	ENST00000513495	KAAG1	Q9UBP8	84 aa		13.16	□□□□□ -0.3
SH3TC1-223	ENST00000513495	ST3GAL6	Q9Y274	331 aa		13.16	□□□□□ -0.3
SH3TC1-223	ENST00000513495	SMIM31	A0A1B0GVY4	71 aa		13.15	□□□□□ -0.3
SH3TC1-223	ENST00000513495	DEGS1	O15121	323 aa		13.15	□□□□□ -0.3
SH3TC1-223	ENST00000513495	NDUFB3	O43676	98 aa		13.15	□□□□□ -0.3
SH3TC1-223	ENST00000513495	HAND1	O96004	215 aa		13.15	□□□□□ -0.3
SH3TC1-223	ENST00000513495	IGHV2-5	P01817	119 aa		13.15	□□□□□ -0.3
SH3TC1-223	ENST00000513495	CLEC2L	P0C7M8	214 aa		13.15	□□□□□ -0.3
SH3TC1-223	ENST00000513495	CALCB	P10092	127 aa		13.15	□□□□□ -0.3
SH3TC1-223	ENST00000513495	ZNF44	P15621	663 aa		13.15	□□□□□ -0.3
SH3TC1-223	ENST00000513495	MGMT	P16455	207 aa		13.15	□□□□□ -0.3
SH3TC1-223	ENST00000513495	SOX6	P35712	828 aa		13.15	□□□□□ -0.3
SH3TC1-223	ENST00000513495	TGFBR1	P36897	503 aa		13.15	□□□□□ -0.3
SH3TC1-223	ENST00000513495	RPS19	P39019	145 aa	Known RBP	13.15	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms