RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 DUX4Q9UBX2 424 aa2.85□□□□□ -1.95
PDLIM5-218ENST00000513341 IGKV1D-43A0A0B4J1Z2 117 aa2.84□□□□□ -1.95
PDLIM5-218ENST00000513341 A0A1W2PQ09 198 aa2.84□□□□□ -1.95
PDLIM5-218ENST00000513341 PSMB11A5LHX3 300 aa2.84□□□□□ -1.95
PDLIM5-218ENST00000513341 A6NIZ1 184 aa2.84□□□□□ -1.95
PDLIM5-218ENST00000513341 CD300LBA8K4G0 201 aa2.84□□□□□ -1.95
PDLIM5-218ENST00000513341 SEC14L6B5MCN3 397 aa2.84□□□□□ -1.95
PDLIM5-218ENST00000513341 CCL24O00175 119 aa2.84□□□□□ -1.95
PDLIM5-218ENST00000513341 CCRL2O00421 344 aa2.84□□□□□ -1.95
PDLIM5-218ENST00000513341 BHLHE40O14503 412 aa2.84□□□□□ -1.95
PDLIM5-218ENST00000513341 COPEO14579 308 aa2.84□□□□□ -1.95
PDLIM5-218ENST00000513341 RFXANKO14593 260 aa2.84□□□□□ -1.95
PDLIM5-218ENST00000513341 TPST1O60507 370 aa2.84□□□□□ -1.95
PDLIM5-218ENST00000513341 ANP32DO95626 131 aa2.84□□□□□ -1.95
PDLIM5-218ENST00000513341 C1QCP02747 245 aa2.84□□□□□ -1.95
PDLIM5-218ENST00000513341 CHRNGP07510 517 aa2.84□□□□□ -1.95
PDLIM5-218ENST00000513341 SNRNP70P08621 437 aaKnown RBP2.84□□□□□ -1.95
PDLIM5-218ENST00000513341 UMPSP11172 480 aa2.84□□□□□ -1.95
PDLIM5-218ENST00000513341 LBPP18428 481 aa2.84□□□□□ -1.95
PDLIM5-218ENST00000513341 CA6P23280 308 aa2.84□□□□□ -1.95
PDLIM5-218ENST00000513341 BRS3P32247 399 aa2.84□□□□□ -1.95
PDLIM5-218ENST00000513341 CDX1P47902 265 aaPredicted RBP2.84□□□□□ -1.95
PDLIM5-218ENST00000513341 CEBPDP49716 269 aaPredicted RBP2.84□□□□□ -1.95
PDLIM5-218ENST00000513341 OR12D2P58182 307 aa2.84□□□□□ -1.95
PDLIM5-218ENST00000513341 RAP1BP61224 184 aa2.84□□□□□ -1.95
PDLIM5-218ENST00000513341 RPL27P61353 136 aaKnown RBP2.84□□□□□ -1.95
PDLIM5-218ENST00000513341 RAP1AP62834 184 aa2.84□□□□□ -1.95
PDLIM5-218ENST00000513341 HIST1H3AP68431 136 aa2.84□□□□□ -1.95
PDLIM5-218ENST00000513341 SLC35B1P78383 322 aa2.84□□□□□ -1.95
PDLIM5-218ENST00000513341 FMODQ06828 376 aa2.84□□□□□ -1.95
PDLIM5-218ENST00000513341 RGNQ15493 299 aa2.84□□□□□ -1.95
PDLIM5-218ENST00000513341 MED22Q15528 200 aa2.84□□□□□ -1.95
PDLIM5-218ENST00000513341 SSX2Q16385 188 aa2.84□□□□□ -1.95
PDLIM5-218ENST00000513341 CCDC92Q53HC0 331 aaPredicted RBP2.84□□□□□ -1.95
PDLIM5-218ENST00000513341 HIST2H3PS2Q5TEC6 136 aa2.84□□□□□ -1.95
PDLIM5-218ENST00000513341 MINOS1Q5TGZ0 78 aa2.84□□□□□ -1.95
PDLIM5-218ENST00000513341 ZNF770Q6IQ21 691 aaPredicted RBP2.84□□□□□ -1.95
PDLIM5-218ENST00000513341 REEP3Q6NUK4 255 aa2.84□□□□□ -1.95
PDLIM5-218ENST00000513341 C8orf74Q6P047 294 aa2.84□□□□□ -1.95
PDLIM5-218ENST00000513341 PLBD1Q6P4A8 553 aa2.84□□□□□ -1.95
PDLIM5-218ENST00000513341 HIST2H3AQ71DI3 136 aa2.84□□□□□ -1.95
PDLIM5-218ENST00000513341 TRMT10CQ7L0Y3 403 aaKnown RBP2.84□□□□□ -1.95
PDLIM5-218ENST00000513341 OR2W3Q7Z3T1 314 aa2.84□□□□□ -1.95
PDLIM5-218ENST00000513341 TSEN54Q7Z6J9 526 aaKnown RBP2.84□□□□□ -1.95
PDLIM5-218ENST00000513341 DHDDSQ86SQ9 333 aa2.84□□□□□ -1.95
PDLIM5-218ENST00000513341 EGFL6Q8IUX8 553 aa2.84□□□□□ -1.95
PDLIM5-218ENST00000513341 CYB561A3Q8NBI2 242 aa2.84□□□□□ -1.95
PDLIM5-218ENST00000513341 OR11H6Q8NGC7 330 aa2.84□□□□□ -1.95
PDLIM5-218ENST00000513341 OR13D1Q8NGV5 346 aa2.84□□□□□ -1.95
PDLIM5-218ENST00000513341 OR10Z1Q8NGY1 313 aa2.84□□□□□ -1.95
PDLIM5-218ENST00000513341 OR8U1Q8NH10 309 aa2.84□□□□□ -1.95
PDLIM5-218ENST00000513341 TCP10LQ8TDR4 215 aa2.84□□□□□ -1.95
PDLIM5-218ENST00000513341 CAPSLQ8WWF8 208 aa2.84□□□□□ -1.95
PDLIM5-218ENST00000513341 H1FXQ92522 213 aaKnown RBP2.84□□□□□ -1.95
PDLIM5-218ENST00000513341 SLCO4A1Q96BD0 722 aa2.84□□□□□ -1.95
PDLIM5-218ENST00000513341 MCHR1Q99705 422 aa2.84□□□□□ -1.95
PDLIM5-218ENST00000513341 C1QTNF4Q9BXJ3 329 aa2.84□□□□□ -1.95
PDLIM5-218ENST00000513341 GON7Q9BXV9 100 aa2.84□□□□□ -1.95
PDLIM5-218ENST00000513341 TXLNGYQ9BZA5 131 aa2.84□□□□□ -1.95
PDLIM5-218ENST00000513341 HDHD2Q9H0R4 259 aa2.84□□□□□ -1.95
PDLIM5-218ENST00000513341 DCLRE1BQ9H816 532 aa2.84□□□□□ -1.95
PDLIM5-218ENST00000513341 PSMC3IPQ9P2W1 217 aaPredicted RBP2.84□□□□□ -1.95
PDLIM5-218ENST00000513341 NDUFAF1Q9Y375 327 aa2.84□□□□□ -1.95
PDLIM5-218ENST00000513341 GMEB1Q9Y692 573 aa2.84□□□□□ -1.95
PDLIM5-218ENST00000513341 CEPT1Q9Y6K0 416 aa2.84□□□□□ -1.95
PDLIM5-218ENST00000513341 MINOS1-NBL1R4GNA1 71 aa2.84□□□□□ -1.95
PDLIM5-218ENST00000513341 KMT2AQ03164 3969 aa2.84□□□□□ -1.96
PDLIM5-218ENST00000513341 A0A1W2PPM1 405 aa2.83□□□□□ -1.96
PDLIM5-218ENST00000513341 TRAPPC13A5PLN9 417 aa2.83□□□□□ -1.96
PDLIM5-218ENST00000513341 C17orf98A8MV24 154 aa2.83□□□□□ -1.96
PDLIM5-218ENST00000513341 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.83□□□□□ -1.96
PDLIM5-218ENST00000513341 SIGLEC5O15389 551 aa2.83□□□□□ -1.96
PDLIM5-218ENST00000513341 HSPA12AO43301 675 aa2.83□□□□□ -1.96
PDLIM5-218ENST00000513341 LY6G6CO95867 125 aa2.83□□□□□ -1.96
PDLIM5-218ENST00000513341 RBP4P02753 201 aa2.83□□□□□ -1.96
PDLIM5-218ENST00000513341 IGHV4-30-4P0DP06 118 aa2.83□□□□□ -1.96
PDLIM5-218ENST00000513341 FCGR1AP12314 374 aa2.83□□□□□ -1.96
PDLIM5-218ENST00000513341 CTLA4P16410 223 aa2.83□□□□□ -1.96
PDLIM5-218ENST00000513341 TMEM11P17152 192 aa2.83□□□□□ -1.96
PDLIM5-218ENST00000513341 AQP2P41181 271 aa2.83□□□□□ -1.96
PDLIM5-218ENST00000513341 RBM34P42696 430 aaKnown RBP2.83□□□□□ -1.96
PDLIM5-218ENST00000513341 CDKN2CP42773 168 aa2.83□□□□□ -1.96
PDLIM5-218ENST00000513341 KIR3DL2P43630 455 aa2.83□□□□□ -1.96
PDLIM5-218ENST00000513341 LUMP51884 338 aaPredicted RBP2.83□□□□□ -1.96
PDLIM5-218ENST00000513341 DLX1P56177 255 aa2.83□□□□□ -1.96
PDLIM5-218ENST00000513341 GNG11P61952 73 aa2.83□□□□□ -1.96
PDLIM5-218ENST00000513341 CDK6Q00534 326 aa2.83□□□□□ -1.96
PDLIM5-218ENST00000513341 PRB3Q04118 309 aaPredicted RBP2.83□□□□□ -1.96
PDLIM5-218ENST00000513341 IL18R1Q13478 541 aa2.83□□□□□ -1.96
PDLIM5-218ENST00000513341 PCLAFQ15004 111 aa2.83□□□□□ -1.96
PDLIM5-218ENST00000513341 FCN2Q15485 313 aa2.83□□□□□ -1.96
PDLIM5-218ENST00000513341 SNCBQ16143 134 aa2.83□□□□□ -1.96
PDLIM5-218ENST00000513341 PCK2Q16822 640 aa2.83□□□□□ -1.96
PDLIM5-218ENST00000513341 DGUOKQ16854 277 aa2.83□□□□□ -1.96
PDLIM5-218ENST00000513341 RSPO1Q2MKA7 263 aaPredicted RBP2.83□□□□□ -1.96
PDLIM5-218ENST00000513341 STUMQ69YW2 141 aa2.83□□□□□ -1.96
PDLIM5-218ENST00000513341 TEX38Q6PEX7 206 aa2.83□□□□□ -1.96
PDLIM5-218ENST00000513341 WDR82Q6UXN9 313 aa2.83□□□□□ -1.96
PDLIM5-218ENST00000513341 ZBTB49Q6ZSB9 765 aa2.83□□□□□ -1.96
PDLIM5-218ENST00000513341 ZNF826PQ6ZT77 177 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms