RNA–Protein interactions for RNA: ENST00000512482.1

COL6A5-204, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 5

Gene COL6A5, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-204ENST00000512482 HMGB3O15347 200 aaKnown RBP3.12□□□□□ -1.91
COL6A5-204ENST00000512482 SOX14O95416 240 aa3.12□□□□□ -1.91
COL6A5-204ENST00000512482 CCNE2O96020 404 aa3.12□□□□□ -1.91
COL6A5-204ENST00000512482 FGF1P05230 155 aa3.12□□□□□ -1.91
COL6A5-204ENST00000512482 CT45A6P0DMU7 189 aa3.12□□□□□ -1.91
COL6A5-204ENST00000512482 CT45A5P0DMU8 189 aa3.12□□□□□ -1.91
COL6A5-204ENST00000512482 CT45A7P0DMV0 189 aa3.12□□□□□ -1.91
COL6A5-204ENST00000512482 ARL2P36404 184 aa3.12□□□□□ -1.91
COL6A5-204ENST00000512482 OR1E2P47887 323 aa3.12□□□□□ -1.91
COL6A5-204ENST00000512482 GPR18Q14330 331 aa3.12□□□□□ -1.91
COL6A5-204ENST00000512482 ZNF234Q14588 700 aa3.12□□□□□ -1.91
COL6A5-204ENST00000512482 DUSP6Q16828 381 aa3.12□□□□□ -1.91
COL6A5-204ENST00000512482 CNPY1Q3B7I2 92 aa3.12□□□□□ -1.91
COL6A5-204ENST00000512482 TFDP3Q5H9I0 405 aa3.12□□□□□ -1.91
COL6A5-204ENST00000512482 CT45A1Q5HYN5 189 aa3.12□□□□□ -1.91
COL6A5-204ENST00000512482 DCST2Q5T1A1 773 aa3.12□□□□□ -1.91
COL6A5-204ENST00000512482 FAM162BQ5T6X4 162 aa3.12□□□□□ -1.91
COL6A5-204ENST00000512482 RWDD4Q6NW29 188 aaKnown RBP3.12□□□□□ -1.91
COL6A5-204ENST00000512482 TNFAIP8L2Q6P589 184 aaPredicted RBP3.12□□□□□ -1.91
COL6A5-204ENST00000512482 DCUN1D2Q6PH85 259 aa3.12□□□□□ -1.91
COL6A5-204ENST00000512482 Q6ZVH6 145 aa3.12□□□□□ -1.91
COL6A5-204ENST00000512482 PRSS48Q7RTY5 328 aa3.12□□□□□ -1.91
COL6A5-204ENST00000512482 UMODL1-AS1Q8N2C9 162 aa3.12□□□□□ -1.91
COL6A5-204ENST00000512482 OR2T12Q8NG77 320 aa3.12□□□□□ -1.91
COL6A5-204ENST00000512482 OR10G4Q8NGN3 311 aa3.12□□□□□ -1.91
COL6A5-204ENST00000512482 OR52N5Q8NH56 324 aa3.12□□□□□ -1.91
COL6A5-204ENST00000512482 ZNRF2Q8NHG8 242 aa3.12□□□□□ -1.91
COL6A5-204ENST00000512482 CT45A3Q8NHU0 189 aa3.12□□□□□ -1.91
COL6A5-204ENST00000512482 GPR119Q8TDV5 335 aa3.12□□□□□ -1.91
COL6A5-204ENST00000512482 NPRL2Q8WTW4 380 aa3.12□□□□□ -1.91
COL6A5-204ENST00000512482 RPUSD4Q96CM3 377 aaKnown RBP3.12□□□□□ -1.91
COL6A5-204ENST00000512482 DDIT4LQ96D03 193 aa3.12□□□□□ -1.91
COL6A5-204ENST00000512482 CMTM7Q96FZ5 175 aa3.12□□□□□ -1.91
COL6A5-204ENST00000512482 C4orf45Q96LM5 186 aa3.12□□□□□ -1.91
COL6A5-204ENST00000512482 LINC00477Q96M19 166 aa3.12□□□□□ -1.91
COL6A5-204ENST00000512482 SORT1Q99523 831 aa3.12□□□□□ -1.91
COL6A5-204ENST00000512482 EFCAB11Q9BUY7 163 aa3.12□□□□□ -1.91
COL6A5-204ENST00000512482 SHARPINQ9H0F6 387 aa3.12□□□□□ -1.91
COL6A5-204ENST00000512482 ZDHHC11Q9H8X9 412 aa3.12□□□□□ -1.91
COL6A5-204ENST00000512482 KCNJ16Q9NPI9 418 aa3.12□□□□□ -1.91
COL6A5-204ENST00000512482 MEPEQ9NQ76 525 aaPredicted RBP3.12□□□□□ -1.91
COL6A5-204ENST00000512482 ING4Q9UNL4 249 aa3.12□□□□□ -1.91
COL6A5-204ENST00000512482 TNS3Q68CZ2 1445 aa3.12□□□□□ -1.91
COL6A5-204ENST00000512482 NCAPD3P42695 1498 aa3.12□□□□□ -1.91
COL6A5-204ENST00000512482 ARHGAP23Q9P227 1491 aa3.12□□□□□ -1.91
COL6A5-204ENST00000512482 PHF3Q92576 2039 aaKnown RBP3.12□□□□□ -1.91
COL6A5-204ENST00000512482 MEIKINA0A087WXM9 373 aa3.12□□□□□ -1.91
COL6A5-204ENST00000512482 LYRM9A8MSI8 78 aa3.12□□□□□ -1.91
COL6A5-204ENST00000512482 TCP10L2B9ZVM9 353 aa3.12□□□□□ -1.91
COL6A5-204ENST00000512482 TIMM23O14925 209 aa3.12□□□□□ -1.91
COL6A5-204ENST00000512482 GGCTO75223 188 aaKnown RBP3.12□□□□□ -1.91
COL6A5-204ENST00000512482 GCM2O75603 506 aaPredicted RBP3.12□□□□□ -1.91
COL6A5-204ENST00000512482 LGALS2P05162 132 aa3.12□□□□□ -1.91
COL6A5-204ENST00000512482 C8GP07360 202 aa3.12□□□□□ -1.91
COL6A5-204ENST00000512482 MPC1LP0DKB6 136 aa3.12□□□□□ -1.91
COL6A5-204ENST00000512482 CD34P28906 385 aa3.12□□□□□ -1.91
COL6A5-204ENST00000512482 CHRNB4P30926 498 aa3.12□□□□□ -1.91
COL6A5-204ENST00000512482 GLRXP35754 106 aa3.12□□□□□ -1.91
COL6A5-204ENST00000512482 OPRL1P41146 370 aa3.12□□□□□ -1.91
COL6A5-204ENST00000512482 TSFMP43897 325 aaKnown RBP3.12□□□□□ -1.91
COL6A5-204ENST00000512482 FABP6P51161 128 aa3.12□□□□□ -1.91
COL6A5-204ENST00000512482 BIDP55957 195 aa3.12□□□□□ -1.91
COL6A5-204ENST00000512482 SNRPD1P62314 119 aaKnown RBP3.12□□□□□ -1.91
COL6A5-204ENST00000512482 SLC25A11Q02978 314 aaKnown RBP3.12□□□□□ -1.91
COL6A5-204ENST00000512482 EIF2B1Q14232 305 aaKnown RBP3.12□□□□□ -1.91
COL6A5-204ENST00000512482 FASTKQ14296 549 aaKnown RBP3.12□□□□□ -1.91
COL6A5-204ENST00000512482 NEDD8Q15843 81 aa3.12□□□□□ -1.91
COL6A5-204ENST00000512482 TAF9Q16594 264 aa3.12□□□□□ -1.91
COL6A5-204ENST00000512482 DUSP5Q16690 384 aa3.12□□□□□ -1.91
COL6A5-204ENST00000512482 ACOT6Q3I5F7 207 aaPredicted RBP3.12□□□□□ -1.91
COL6A5-204ENST00000512482 TEX36Q5VZQ5 186 aa3.12□□□□□ -1.91
COL6A5-204ENST00000512482 TBPL2Q6SJ96 375 aa3.12□□□□□ -1.91
COL6A5-204ENST00000512482 PIANPQ8IYJ0 282 aa3.12□□□□□ -1.91
COL6A5-204ENST00000512482 C4orf33Q8N1A6 199 aa3.12□□□□□ -1.91
COL6A5-204ENST00000512482 GAPTQ8N292 157 aa3.12□□□□□ -1.91
COL6A5-204ENST00000512482 MAPKAPK5-AS1Q8N8E1 139 aa3.12□□□□□ -1.91
COL6A5-204ENST00000512482 ZNF383Q8NA42 475 aa3.12□□□□□ -1.91
COL6A5-204ENST00000512482 MCFD2Q8NI22 146 aa3.12□□□□□ -1.91
COL6A5-204ENST00000512482 FBXO25Q8TCJ0 367 aa3.12□□□□□ -1.91
COL6A5-204ENST00000512482 ARPC1AQ92747 370 aa3.12□□□□□ -1.91
COL6A5-204ENST00000512482 PIK3IP1Q96FE7 263 aa3.12□□□□□ -1.91
COL6A5-204ENST00000512482 CAPZA3Q96KX2 299 aa3.12□□□□□ -1.91
COL6A5-204ENST00000512482 PGLYRP3Q96LB9 341 aa3.12□□□□□ -1.91
COL6A5-204ENST00000512482 TBX15Q96SF7 602 aa3.12□□□□□ -1.91
COL6A5-204ENST00000512482 RIOK2Q9BVS4 552 aaKnown RBP3.12□□□□□ -1.91
COL6A5-204ENST00000512482 EXOSC4Q9NPD3 245 aaKnown RBP3.12□□□□□ -1.91
COL6A5-204ENST00000512482 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.12□□□□□ -1.91
COL6A5-204ENST00000512482 FBXO7Q9Y3I1 522 aa3.12□□□□□ -1.91
COL6A5-204ENST00000512482 INSL5Q9Y5Q6 135 aa3.12□□□□□ -1.91
COL6A5-204ENST00000512482 CPSF1Q10570 1443 aaKnown RBP3.12□□□□□ -1.91
COL6A5-204ENST00000512482 CCDC88AQ3V6T2 1871 aa3.12□□□□□ -1.91
COL6A5-204ENST00000512482 ZNF638Q14966 1978 aaKnown RBP3.12□□□□□ -1.91
COL6A5-204ENST00000512482 DYSFO75923 2080 aa3.12□□□□□ -1.91
COL6A5-204ENST00000512482 ABCC10Q5T3U5 1492 aa3.11□□□□□ -1.91
COL6A5-204ENST00000512482 PDS5BQ9NTI5 1447 aa3.11□□□□□ -1.91
COL6A5-204ENST00000512482 NEDD4P46934 1319 aa3.11□□□□□ -1.91
COL6A5-204ENST00000512482 IGSF9BQ9UPX0 1349 aa3.11□□□□□ -1.91
COL6A5-204ENST00000512482 FAM240AA0A1B0GVK7 77 aa3.11□□□□□ -1.91
COL6A5-204ENST00000512482 BTNL10A8MVZ5 291 aa3.11□□□□□ -1.91
COL6A5-204ENST00000512482 G3V2L1 256 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms