RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 ECI1P42126 302 aa7.27□□□□□ -1.25
NUP54-211ENST00000512151 SLC15A1P46059 708 aa7.27□□□□□ -1.25
NUP54-211ENST00000512151 TGM4P49221 684 aa7.27□□□□□ -1.25
NUP54-211ENST00000512151 RPS7P62081 194 aaKnown RBP7.27□□□□□ -1.25
NUP54-211ENST00000512151 LSM6P62312 80 aaKnown RBP7.27□□□□□ -1.25
NUP54-211ENST00000512151 HIST1H3AP68431 136 aa7.27□□□□□ -1.25
NUP54-211ENST00000512151 ZNF91Q05481 1191 aa7.27□□□□□ -1.25
NUP54-211ENST00000512151 SCRN3Q0VDG4 424 aa7.27□□□□□ -1.25
NUP54-211ENST00000512151 GK2Q14410 553 aaPredicted RBP7.27□□□□□ -1.25
NUP54-211ENST00000512151 OR8G1Q15617 311 aa7.27□□□□□ -1.25
NUP54-211ENST00000512151 RSPO1Q2MKA7 263 aaPredicted RBP7.27□□□□□ -1.25
NUP54-211ENST00000512151 HIST2H3PS2Q5TEC6 136 aa7.27□□□□□ -1.25
NUP54-211ENST00000512151 XAF1Q6GPH4 301 aa7.27□□□□□ -1.25
NUP54-211ENST00000512151 CORO6Q6QEF8 472 aa7.27□□□□□ -1.25
NUP54-211ENST00000512151 HIST2H3AQ71DI3 136 aa7.27□□□□□ -1.25
NUP54-211ENST00000512151 OVCH2Q7RTZ1 564 aa7.27□□□□□ -1.25
NUP54-211ENST00000512151 CENPVQ7Z7K6 275 aaPredicted RBP7.27□□□□□ -1.25
NUP54-211ENST00000512151 CLVS1Q8IUQ0 354 aaPredicted RBP7.27□□□□□ -1.25
NUP54-211ENST00000512151 LINC00346Q8IVM7 164 aa7.27□□□□□ -1.25
NUP54-211ENST00000512151 GID4Q8IVV7 300 aa7.27□□□□□ -1.25
NUP54-211ENST00000512151 SPARTQ8N0X7 666 aa7.27□□□□□ -1.25
NUP54-211ENST00000512151 OR5L1Q8NGL2 311 aa7.27□□□□□ -1.25
NUP54-211ENST00000512151 OR13F1Q8NGS4 319 aa7.27□□□□□ -1.25
NUP54-211ENST00000512151 GGHQ92820 318 aa7.27□□□□□ -1.25
NUP54-211ENST00000512151 APOBEC3DQ96AK3 386 aaPredicted RBP7.27□□□□□ -1.25
NUP54-211ENST00000512151 ISOC1Q96CN7 298 aa7.27□□□□□ -1.25
NUP54-211ENST00000512151 LGALS12Q96DT0 336 aa7.27□□□□□ -1.25
NUP54-211ENST00000512151 RNFT2Q96EX2 444 aa7.27□□□□□ -1.25
NUP54-211ENST00000512151 MRPS18AQ9NVS2 196 aaKnown RBP7.27□□□□□ -1.25
NUP54-211ENST00000512151 HAO2Q9NYQ3 351 aa7.27□□□□□ -1.25
NUP54-211ENST00000512151 WARS2Q9UGM6 360 aaKnown RBP7.27□□□□□ -1.25
NUP54-211ENST00000512151 COPS3Q9UNS2 423 aa7.27□□□□□ -1.25
NUP54-211ENST00000512151 EXOGQ9Y2C4 368 aaKnown RBP7.27□□□□□ -1.25
NUP54-211ENST00000512151 KLHDC2Q9Y2U9 406 aa7.27□□□□□ -1.25
NUP54-211ENST00000512151 PRR32B1ATL7 298 aa7.26□□□□□ -1.25
NUP54-211ENST00000512151 J3QW42 95 aa7.26□□□□□ -1.25
NUP54-211ENST00000512151 F2RL2O00254 374 aa7.26□□□□□ -1.25
NUP54-211ENST00000512151 RER1O15258 196 aa7.26□□□□□ -1.25
NUP54-211ENST00000512151 NDUFB3O43676 98 aa7.26□□□□□ -1.25
NUP54-211ENST00000512151 GRPP07492 148 aa7.26□□□□□ -1.25
NUP54-211ENST00000512151 HTR1AP08908 422 aa7.26□□□□□ -1.25
NUP54-211ENST00000512151 SPARCP09486 303 aa7.26□□□□□ -1.25
NUP54-211ENST00000512151 ZNF823P16415 610 aa7.26□□□□□ -1.25
NUP54-211ENST00000512151 ANOS1P23352 680 aa7.26□□□□□ -1.25
NUP54-211ENST00000512151 ENTPD1P49961 510 aa7.26□□□□□ -1.25
NUP54-211ENST00000512151 TMBIM6P55061 237 aa7.26□□□□□ -1.25
NUP54-211ENST00000512151 CSNK2BP67870 215 aa7.26□□□□□ -1.25
NUP54-211ENST00000512151 TMED1Q13445 227 aa7.26□□□□□ -1.25
NUP54-211ENST00000512151 TEX30Q5JUR7 227 aa7.26□□□□□ -1.25
NUP54-211ENST00000512151 LDLRAD2Q5SZI1 272 aa7.26□□□□□ -1.25
NUP54-211ENST00000512151 SLC18B1Q6NT16 456 aa7.26□□□□□ -1.25
NUP54-211ENST00000512151 CFAP77Q6ZQR2 320 aa7.26□□□□□ -1.25
NUP54-211ENST00000512151 LHFPL2Q6ZUX7 228 aa7.26□□□□□ -1.25
NUP54-211ENST00000512151 SSX6Q7RTT6 188 aa7.26□□□□□ -1.25
NUP54-211ENST00000512151 SLC16A9Q7RTY1 509 aa7.26□□□□□ -1.25
NUP54-211ENST00000512151 DPY19L4Q7Z388 723 aa7.26□□□□□ -1.25
NUP54-211ENST00000512151 C11orf53Q8IXP5 236 aa7.26□□□□□ -1.25
NUP54-211ENST00000512151 MKXQ8IYA7 352 aa7.26□□□□□ -1.25
NUP54-211ENST00000512151 BPIFB6Q8NFQ5 453 aa7.26□□□□□ -1.25
NUP54-211ENST00000512151 OR5T2Q8NGG2 359 aa7.26□□□□□ -1.25
NUP54-211ENST00000512151 OR52I1Q8NGK6 324 aa7.26□□□□□ -1.25
NUP54-211ENST00000512151 OR6N2Q8NGY6 317 aa7.26□□□□□ -1.25
NUP54-211ENST00000512151 C12orf43Q96C57 262 aaKnown RBP7.26□□□□□ -1.25
NUP54-211ENST00000512151 Q96MT0 163 aa7.26□□□□□ -1.25
NUP54-211ENST00000512151 INTS14Q96SY0 518 aa7.26□□□□□ -1.25
NUP54-211ENST00000512151 P2RX4Q99571 388 aa7.26□□□□□ -1.25
NUP54-211ENST00000512151 KRTAP9-9Q9BYP9 154 aa7.26□□□□□ -1.25
NUP54-211ENST00000512151 KRTAP9-4Q9BYQ2 154 aa7.26□□□□□ -1.25
NUP54-211ENST00000512151 DUSP21Q9H596 190 aa7.26□□□□□ -1.25
NUP54-211ENST00000512151 ELL3Q9HB65 397 aaPredicted RBP7.26□□□□□ -1.25
NUP54-211ENST00000512151 PNRC2Q9NPJ4 139 aaKnown RBP7.26□□□□□ -1.25
NUP54-211ENST00000512151 PLCXD1Q9NUJ7 323 aa7.26□□□□□ -1.25
NUP54-211ENST00000512151 PAK1IP1Q9NWT1 392 aaPredicted RBP7.26□□□□□ -1.25
NUP54-211ENST00000512151 ZMAT5Q9UDW3 170 aaKnown RBP7.26□□□□□ -1.25
NUP54-211ENST00000512151 CYB5R1Q9UHQ9 305 aa7.26□□□□□ -1.25
NUP54-211ENST00000512151 KCNG2Q9UJ96 466 aa7.26□□□□□ -1.25
NUP54-211ENST00000512151 TPRKBQ9Y3C4 175 aa7.26□□□□□ -1.25
NUP54-211ENST00000512151 hCG_1807616A0A1W2PRN6 198 aa7.25□□□□□ -1.25
NUP54-211ENST00000512151 FAM90A8PA6NJQ4 464 aa7.25□□□□□ -1.25
NUP54-211ENST00000512151 A6NLC8 198 aa7.25□□□□□ -1.25
NUP54-211ENST00000512151 MAGEB4O15481 346 aaPredicted RBP7.25□□□□□ -1.25
NUP54-211ENST00000512151 SNRNP70P08621 437 aaKnown RBP7.25□□□□□ -1.25
NUP54-211ENST00000512151 GUCA1AP43080 201 aaPredicted RBP7.25□□□□□ -1.25
NUP54-211ENST00000512151 BLVRAP53004 296 aa7.25□□□□□ -1.25
NUP54-211ENST00000512151 ERVFRD-1P60508 538 aa7.25□□□□□ -1.25
NUP54-211ENST00000512151 ZNF85Q03923 595 aa7.25□□□□□ -1.25
NUP54-211ENST00000512151 AQP6Q13520 282 aa7.25□□□□□ -1.25
NUP54-211ENST00000512151 NEDD8Q15843 81 aa7.25□□□□□ -1.25
NUP54-211ENST00000512151 LCN1P1Q5VSP4 162 aa7.25□□□□□ -1.25
NUP54-211ENST00000512151 C8orf86Q6ZUL3 223 aa7.25□□□□□ -1.25
NUP54-211ENST00000512151 DCXRQ7Z4W1 244 aa7.25□□□□□ -1.25
NUP54-211ENST00000512151 WDR86Q86TI4 376 aa7.25□□□□□ -1.25
NUP54-211ENST00000512151 SLC35F2Q8IXU6 374 aa7.25□□□□□ -1.25
NUP54-211ENST00000512151 PLPP7Q8NBV4 271 aa7.25□□□□□ -1.25
NUP54-211ENST00000512151 OTOSQ8NHW6 89 aa7.25□□□□□ -1.25
NUP54-211ENST00000512151 LRRC29Q8WV35 223 aa7.25□□□□□ -1.25
NUP54-211ENST00000512151 RFKQ969G6 155 aa7.25□□□□□ -1.25
NUP54-211ENST00000512151 MUL1Q969V5 352 aa7.25□□□□□ -1.25
NUP54-211ENST00000512151 DUX3Q96PT4 197 aa7.25□□□□□ -1.25
NUP54-211ENST00000512151 TBX5Q99593 518 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms