RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 OR2G6Q5TZ20 316 aa13.51□□□□□ -0.25
DDX41-213ENST00000512027 UTS2BQ765I0 119 aa13.51□□□□□ -0.25
DDX41-213ENST00000512027 ZNF561Q8N587 486 aa13.51□□□□□ -0.25
DDX41-213ENST00000512027 ASCC1Q8N9N2 400 aaKnown RBP13.51□□□□□ -0.25
DDX41-213ENST00000512027 OR5D18Q8NGL1 313 aa13.51□□□□□ -0.25
DDX41-213ENST00000512027 EMG1Q92979 244 aaKnown RBP13.51□□□□□ -0.25
DDX41-213ENST00000512027 MRPL48Q96GC5 212 aaKnown RBP13.51□□□□□ -0.25
DDX41-213ENST00000512027 CHIAQ9BZP6 476 aa13.51□□□□□ -0.25
DDX41-213ENST00000512027 ZMAT3Q9HA38 289 aaKnown RBP13.51□□□□□ -0.25
DDX41-213ENST00000512027 FGF20Q9NP95 211 aaPredicted RBP13.51□□□□□ -0.25
DDX41-213ENST00000512027 INPP5EQ9NRR6 644 aa13.51□□□□□ -0.25
DDX41-213ENST00000512027 TRBV23-1A0A0A0MS06 115 aa13.5□□□□□ -0.25
DDX41-213ENST00000512027 CLDN34H7C241 214 aa13.5□□□□□ -0.25
DDX41-213ENST00000512027 KNG1P01042 644 aa13.5□□□□□ -0.25
DDX41-213ENST00000512027 IGHV4-59P01825 116 aa13.5□□□□□ -0.25
DDX41-213ENST00000512027 TK1P04183 234 aa13.5□□□□□ -0.25
DDX41-213ENST00000512027 GNAO1P09471 354 aa13.5□□□□□ -0.25
DDX41-213ENST00000512027 CCL3L1P16619 93 aa13.5□□□□□ -0.25
DDX41-213ENST00000512027 OMGP23515 440 aa13.5□□□□□ -0.25
DDX41-213ENST00000512027 DUSP1P28562 367 aa13.5□□□□□ -0.25
DDX41-213ENST00000512027 RPL31P62899 125 aaKnown RBP13.5□□□□□ -0.25
DDX41-213ENST00000512027 ZNF273Q14593 569 aa13.5□□□□□ -0.25
DDX41-213ENST00000512027 HCP5Q6MZN7 132 aa13.5□□□□□ -0.25
DDX41-213ENST00000512027 CRIP3Q6Q6R5 217 aa13.5□□□□□ -0.25
DDX41-213ENST00000512027 EGFL6Q8IUX8 553 aa13.5□□□□□ -0.25
DDX41-213ENST00000512027 DHRSXQ8N5I4 330 aa13.5□□□□□ -0.25
DDX41-213ENST00000512027 PACRGLQ8N7B6 248 aa13.5□□□□□ -0.25
DDX41-213ENST00000512027 DNAAF1Q8NEP3 725 aa13.5□□□□□ -0.25
DDX41-213ENST00000512027 RGP1Q92546 391 aaPredicted RBP13.5□□□□□ -0.25
DDX41-213ENST00000512027 OPALINQ96PE5 141 aa13.5□□□□□ -0.25
DDX41-213ENST00000512027 IGKV1-12A0A0C4DH73 117 aa13.49□□□□□ -0.25
DDX41-213ENST00000512027 FAM181BA6NEQ2 426 aa13.49□□□□□ -0.25
DDX41-213ENST00000512027 H0YAE9 185 aa13.49□□□□□ -0.25
DDX41-213ENST00000512027 M0R1W7 72 aa13.49□□□□□ -0.25
DDX41-213ENST00000512027 NPFFO15130 113 aa13.49□□□□□ -0.25
DDX41-213ENST00000512027 IGKV1D-12P01611 117 aa13.49□□□□□ -0.25
DDX41-213ENST00000512027 PRKACBP22694 351 aa13.49□□□□□ -0.25
DDX41-213ENST00000512027 GBX2P52951 348 aaPredicted RBP13.49□□□□□ -0.25
DDX41-213ENST00000512027 OGFRL1Q5TC84 451 aaPredicted RBP13.49□□□□□ -0.25
DDX41-213ENST00000512027 TTC23Q5W5X9 447 aa13.49□□□□□ -0.25
DDX41-213ENST00000512027 TMEM200BQ69YZ2 307 aa13.49□□□□□ -0.25
DDX41-213ENST00000512027 C16orf87Q6PH81 154 aa13.49□□□□□ -0.25
DDX41-213ENST00000512027 METAP1DQ6UB28 335 aaPredicted RBP13.49□□□□□ -0.25
DDX41-213ENST00000512027 FIP1L1Q6UN15 594 aaKnown RBP13.49□□□□□ -0.25
DDX41-213ENST00000512027 LHFPL2Q6ZUX7 228 aa13.49□□□□□ -0.25
DDX41-213ENST00000512027 MKXQ8IYA7 352 aa13.49□□□□□ -0.25
DDX41-213ENST00000512027 C3orf56Q8N813 242 aa13.49□□□□□ -0.25
DDX41-213ENST00000512027 OR5AK2Q8NH90 309 aa13.49□□□□□ -0.25
DDX41-213ENST00000512027 TSEN15Q8WW01 171 aaKnown RBP13.49□□□□□ -0.25
DDX41-213ENST00000512027 C17orf50Q8WW18 174 aa13.49□□□□□ -0.25
DDX41-213ENST00000512027 DMRTB1Q96MA1 342 aa13.49□□□□□ -0.25
DDX41-213ENST00000512027 NKX3-1Q99801 234 aaPredicted RBP13.49□□□□□ -0.25
DDX41-213ENST00000512027 METTL8Q9H825 291 aaKnown RBP13.49□□□□□ -0.25
DDX41-213ENST00000512027 NOX4Q9NPH5 578 aa13.49□□□□□ -0.25
DDX41-213ENST00000512027 NKX1-2Q9UD57 310 aaPredicted RBP13.49□□□□□ -0.25
DDX41-213ENST00000512027 CLEC2DQ9UHP7 191 aa13.49□□□□□ -0.25
DDX41-213ENST00000512027 SIRT4Q9Y6E7 314 aaPredicted RBP13.49□□□□□ -0.25
DDX41-213ENST00000512027 TRBV2A0A0J9YWF9 115 aa13.48□□□□□ -0.25
DDX41-213ENST00000512027 TMEM82A0PJX8 343 aa13.48□□□□□ -0.25
DDX41-213ENST00000512027 TMEM212A6NML5 194 aa13.48□□□□□ -0.25
DDX41-213ENST00000512027 CASQ2O14958 399 aaPredicted RBP13.48□□□□□ -0.25
DDX41-213ENST00000512027 ZNF737O75373 536 aa13.48□□□□□ -0.25
DDX41-213ENST00000512027 LALBAP00709 142 aa13.48□□□□□ -0.25
DDX41-213ENST00000512027 OCM2P0CE71 109 aa13.48□□□□□ -0.25
DDX41-213ENST00000512027 OCMP0CE72 109 aaPredicted RBP13.48□□□□□ -0.25
DDX41-213ENST00000512027 PRKACAP17612 351 aa13.48□□□□□ -0.25
DDX41-213ENST00000512027 PAX6P26367 422 aa13.48□□□□□ -0.25
DDX41-213ENST00000512027 SAA4P35542 130 aa13.48□□□□□ -0.25
DDX41-213ENST00000512027 SOX2P48431 317 aa13.48□□□□□ -0.25
DDX41-213ENST00000512027 LAIR2Q6ISS4 152 aa13.48□□□□□ -0.25
DDX41-213ENST00000512027 C11orf42Q8N5U0 333 aa13.48□□□□□ -0.25
DDX41-213ENST00000512027 TPRX1Q8N7U7 411 aa13.48□□□□□ -0.25
DDX41-213ENST00000512027 SPSB1Q96BD6 273 aa13.48□□□□□ -0.25
DDX41-213ENST00000512027 JAM3Q9BX67 310 aa13.48□□□□□ -0.25
DDX41-213ENST00000512027 CHST6Q9GZX3 395 aa13.48□□□□□ -0.25
DDX41-213ENST00000512027 COMMD4Q9H0A8 199 aa13.48□□□□□ -0.25
DDX41-213ENST00000512027 ZCCHC4Q9H5U6 513 aa13.48□□□□□ -0.25
DDX41-213ENST00000512027 DHDHQ9UQ10 334 aa13.48□□□□□ -0.25
DDX41-213ENST00000512027 MEIOCA2RUB1 952 aa13.47□□□□□ -0.25
DDX41-213ENST00000512027 K7N7A8 449 aa13.47□□□□□ -0.25
DDX41-213ENST00000512027 HAND1O96004 215 aa13.47□□□□□ -0.25
DDX41-213ENST00000512027 CCDC159P0C7I6 412 aa13.47□□□□□ -0.25
DDX41-213ENST00000512027 MDKP21741 143 aaPredicted RBP13.47□□□□□ -0.25
DDX41-213ENST00000512027 EEF1B2P24534 225 aaKnown RBP13.47□□□□□ -0.25
DDX41-213ENST00000512027 DCKP27707 260 aa13.47□□□□□ -0.25
DDX41-213ENST00000512027 CAPGP40121 348 aa13.47□□□□□ -0.25
DDX41-213ENST00000512027 EDDM3BP56851 147 aa13.47□□□□□ -0.25
DDX41-213ENST00000512027 GUCA2AQ02747 115 aa13.47□□□□□ -0.25
DDX41-213ENST00000512027 FOXL1Q12952 345 aa13.47□□□□□ -0.25
DDX41-213ENST00000512027 PDZK1IP1Q13113 114 aa13.47□□□□□ -0.25
DDX41-213ENST00000512027 IL18R1Q13478 541 aa13.47□□□□□ -0.25
DDX41-213ENST00000512027 BLMHQ13867 455 aa13.47□□□□□ -0.25
DDX41-213ENST00000512027 EDDM3AQ14507 147 aa13.47□□□□□ -0.25
DDX41-213ENST00000512027 ASPHD2Q6ICH7 369 aa13.47□□□□□ -0.25
DDX41-213ENST00000512027 ZNF782Q6ZMW2 699 aaPredicted RBP13.47□□□□□ -0.25
DDX41-213ENST00000512027 FAM58AQ8N1B3 248 aa13.47□□□□□ -0.25
DDX41-213ENST00000512027 SETD9Q8NE22 299 aa13.47□□□□□ -0.25
DDX41-213ENST00000512027 OR52N4Q8NGI2 321 aa13.47□□□□□ -0.25
DDX41-213ENST00000512027 OR13C5Q8NGS8 318 aa13.47□□□□□ -0.25
DDX41-213ENST00000512027 MYCBPQ99417 103 aaPredicted RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms