RNA–Protein interactions for RNA: ENST00000511002.5

SH3TC1-220, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 5

Gene SH3TC1, Length 1,124 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-220ENST00000511002 LYPD2Q6UXB3 125 aa12.95□□□□□ -0.34
SH3TC1-220ENST00000511002 SPICQ8N5J4 248 aa12.95□□□□□ -0.34
SH3TC1-220ENST00000511002 JAGN1Q8N5M9 183 aa12.95□□□□□ -0.34
SH3TC1-220ENST00000511002 OR5T2Q8NGG2 359 aa12.95□□□□□ -0.34
SH3TC1-220ENST00000511002 TNFAIP8L1Q8WVP5 186 aa12.95□□□□□ -0.34
SH3TC1-220ENST00000511002 PHYHIPQ92561 330 aa12.95□□□□□ -0.34
SH3TC1-220ENST00000511002 TMPRSS13Q9BYE2 586 aa12.95□□□□□ -0.34
SH3TC1-220ENST00000511002 FAM192AQ9GZU8 254 aa12.95□□□□□ -0.34
SH3TC1-220ENST00000511002 OR51E2Q9H255 320 aa12.95□□□□□ -0.34
SH3TC1-220ENST00000511002 HES4Q9HCC6 221 aa12.95□□□□□ -0.34
SH3TC1-220ENST00000511002 DNAJB11Q9UBS4 358 aa12.95□□□□□ -0.34
SH3TC1-220ENST00000511002 TRAV38-1A0A0B4J264 116 aa12.94□□□□□ -0.34
SH3TC1-220ENST00000511002 TRAV20A0A0B4J274 112 aa12.94□□□□□ -0.34
SH3TC1-220ENST00000511002 A0A1B0GW55 424 aa12.94□□□□□ -0.34
SH3TC1-220ENST00000511002 ARL6IP5O75915 188 aa12.94□□□□□ -0.34
SH3TC1-220ENST00000511002 NXPH2O95156 264 aa12.94□□□□□ -0.34
SH3TC1-220ENST00000511002 DUX4L2P0CJ85 424 aa12.94□□□□□ -0.34
SH3TC1-220ENST00000511002 DUX4L3P0CJ86 424 aa12.94□□□□□ -0.34
SH3TC1-220ENST00000511002 DUX4L4P0CJ87 422 aa12.94□□□□□ -0.34
SH3TC1-220ENST00000511002 DUX4L5P0CJ88 424 aa12.94□□□□□ -0.34
SH3TC1-220ENST00000511002 DUX4L6P0CJ89 424 aa12.94□□□□□ -0.34
SH3TC1-220ENST00000511002 DUX4L7P0CJ90 424 aa12.94□□□□□ -0.34
SH3TC1-220ENST00000511002 TMEM225BP0DP42 221 aa12.94□□□□□ -0.34
SH3TC1-220ENST00000511002 SRMP19623 302 aa12.94□□□□□ -0.34
SH3TC1-220ENST00000511002 SRP14P37108 136 aaKnown RBP12.94□□□□□ -0.34
SH3TC1-220ENST00000511002 MICBQ29980 383 aa12.94□□□□□ -0.34
SH3TC1-220ENST00000511002 KRTAP24-1Q3LI83 254 aa12.94□□□□□ -0.34
SH3TC1-220ENST00000511002 STUMQ69YW2 141 aa12.94□□□□□ -0.34
SH3TC1-220ENST00000511002 FAHD2BQ6P2I3 314 aaPredicted RBP12.94□□□□□ -0.34
SH3TC1-220ENST00000511002 DUX4L9Q6RFH8 374 aaPredicted RBP12.94□□□□□ -0.34
SH3TC1-220ENST00000511002 ACP7Q6ZNF0 438 aa12.94□□□□□ -0.34
SH3TC1-220ENST00000511002 DCDC5Q6ZRR9 648 aa12.94□□□□□ -0.34
SH3TC1-220ENST00000511002 C1QL2Q7Z5L3 287 aa12.94□□□□□ -0.34
SH3TC1-220ENST00000511002 LYPD6Q86Y78 171 aa12.94□□□□□ -0.34
SH3TC1-220ENST00000511002 MKXQ8IYA7 352 aa12.94□□□□□ -0.34
SH3TC1-220ENST00000511002 TMIGD2Q96BF3 282 aa12.94□□□□□ -0.34
SH3TC1-220ENST00000511002 YIPF6Q96EC8 236 aa12.94□□□□□ -0.34
SH3TC1-220ENST00000511002 CPNE2Q96FN4 548 aaPredicted RBP12.94□□□□□ -0.34
SH3TC1-220ENST00000511002 FAHD2AQ96GK7 314 aa12.94□□□□□ -0.34
SH3TC1-220ENST00000511002 GFI1Q99684 422 aa12.94□□□□□ -0.34
SH3TC1-220ENST00000511002 PATZ1Q9HBE1 687 aaKnown RBP12.94□□□□□ -0.34
SH3TC1-220ENST00000511002 SMURF1Q9HCE7 757 aa12.94□□□□□ -0.34
SH3TC1-220ENST00000511002 EXOSC4Q9NPD3 245 aaKnown RBP12.94□□□□□ -0.34
SH3TC1-220ENST00000511002 RBFOX1Q9NWB1 397 aaKnown RBP12.94□□□□□ -0.34
SH3TC1-220ENST00000511002 NLKQ9UBE8 527 aa12.94□□□□□ -0.34
SH3TC1-220ENST00000511002 IL36RNQ9UBH0 155 aa12.94□□□□□ -0.34
SH3TC1-220ENST00000511002 DUX4Q9UBX2 424 aa12.94□□□□□ -0.34
SH3TC1-220ENST00000511002 LOC105371242A0A075B767 164 aa12.93□□□□□ -0.34
SH3TC1-220ENST00000511002 SHISA3A0PJX4 238 aa12.93□□□□□ -0.34
SH3TC1-220ENST00000511002 RNF212BA8MTL3 300 aa12.93□□□□□ -0.34
SH3TC1-220ENST00000511002 F5H0A9 414 aaPredicted RBP12.93□□□□□ -0.34
SH3TC1-220ENST00000511002 TRAPPC2LH3BP13 241 aa12.93□□□□□ -0.34
SH3TC1-220ENST00000511002 TNFRSF13BO14836 293 aaPredicted RBP12.93□□□□□ -0.34
SH3TC1-220ENST00000511002 KDM4BO94953 1096 aa12.93□□□□□ -0.34
SH3TC1-220ENST00000511002 CYB5AP00167 134 aa12.93□□□□□ -0.34
SH3TC1-220ENST00000511002 ACAA1P09110 424 aaPredicted RBP12.93□□□□□ -0.34
SH3TC1-220ENST00000511002 CALCBP10092 127 aa12.93□□□□□ -0.34
SH3TC1-220ENST00000511002 RPS2P15880 293 aaKnown RBP12.93□□□□□ -0.34
SH3TC1-220ENST00000511002 MUC1P15941 1255 aaPredicted RBP12.93□□□□□ -0.34
SH3TC1-220ENST00000511002 AMY2BP19961 511 aa12.93□□□□□ -0.34
SH3TC1-220ENST00000511002 GALP22466 123 aa12.93□□□□□ -0.34
SH3TC1-220ENST00000511002 SMIM21Q3B7S5 101 aa12.93□□□□□ -0.34
SH3TC1-220ENST00000511002 SAXO1Q8IYX7 474 aa12.93□□□□□ -0.34
SH3TC1-220ENST00000511002 NKAIN3Q8N8D7 197 aa12.93□□□□□ -0.34
SH3TC1-220ENST00000511002 ZSCAN4Q8NAM6 433 aaPredicted RBP12.93□□□□□ -0.34
SH3TC1-220ENST00000511002 EMG1Q92979 244 aaKnown RBP12.93□□□□□ -0.34
SH3TC1-220ENST00000511002 CHCHD6Q9BRQ6 235 aa12.93□□□□□ -0.34
SH3TC1-220ENST00000511002 SLITRK2Q9H156 845 aa12.93□□□□□ -0.34
SH3TC1-220ENST00000511002 CNTD2Q9H8S5 307 aa12.93□□□□□ -0.34
SH3TC1-220ENST00000511002 MMP26Q9NRE1 261 aa12.93□□□□□ -0.34
SH3TC1-220ENST00000511002 TXNL4BQ9NX01 149 aaKnown RBP12.93□□□□□ -0.34
SH3TC1-220ENST00000511002 RASL12Q9NYN1 266 aa12.93□□□□□ -0.34
SH3TC1-220ENST00000511002 CTSZQ9UBR2 303 aa12.93□□□□□ -0.34
SH3TC1-220ENST00000511002 PCDHB10Q9UN67 800 aa12.93□□□□□ -0.34
SH3TC1-220ENST00000511002 DOCK11Q5JSL3 2073 aa12.92□□□□□ -0.34
SH3TC1-220ENST00000511002 IGKV1D-17A0A075B6S4 117 aa12.92□□□□□ -0.34
SH3TC1-220ENST00000511002 LOC100506127A0A0U1RQW1 187 aa12.92□□□□□ -0.34
SH3TC1-220ENST00000511002 OR2AT4A6NND4 320 aa12.92□□□□□ -0.34
SH3TC1-220ENST00000511002 ADAM20O43506 726 aa12.92□□□□□ -0.34
SH3TC1-220ENST00000511002 CDRT1O95170 752 aa12.92□□□□□ -0.34
SH3TC1-220ENST00000511002 SFTPBP07988 381 aa12.92□□□□□ -0.34
SH3TC1-220ENST00000511002 PSG2P11465 335 aa12.92□□□□□ -0.34
SH3TC1-220ENST00000511002 FGF9P31371 208 aaPredicted RBP12.92□□□□□ -0.34
SH3TC1-220ENST00000511002 PTGFRP43088 359 aa12.92□□□□□ -0.34
SH3TC1-220ENST00000511002 CEBPDP49716 269 aaPredicted RBP12.92□□□□□ -0.34
SH3TC1-220ENST00000511002 SNU13P55769 128 aaKnown RBP12.92□□□□□ -0.34
SH3TC1-220ENST00000511002 KCNJ8Q15842 424 aa12.92□□□□□ -0.34
SH3TC1-220ENST00000511002 FAM216BQ8N7L0 139 aa12.92□□□□□ -0.34
SH3TC1-220ENST00000511002 OR4D6Q8NGJ1 314 aa12.92□□□□□ -0.34
SH3TC1-220ENST00000511002 OR13F1Q8NGS4 319 aa12.92□□□□□ -0.34
SH3TC1-220ENST00000511002 OR10K1Q8NGX5 313 aa12.92□□□□□ -0.34
SH3TC1-220ENST00000511002 ANGPTL6Q8NI99 470 aa12.92□□□□□ -0.34
SH3TC1-220ENST00000511002 C12orf43Q96C57 262 aaKnown RBP12.92□□□□□ -0.34
SH3TC1-220ENST00000511002 CCL13Q99616 98 aa12.92□□□□□ -0.34
SH3TC1-220ENST00000511002 RNF167Q9H6Y7 350 aa12.92□□□□□ -0.34
SH3TC1-220ENST00000511002 ZNF222Q9UK12 451 aa12.92□□□□□ -0.34
SH3TC1-220ENST00000511002 SSR3Q9UNL2 185 aa12.92□□□□□ -0.34
SH3TC1-220ENST00000511002 COL6A5A8TX70 2615 aa12.91□□□□□ -0.34
SH3TC1-220ENST00000511002 MEGF11A6BM72 1044 aa12.91□□□□□ -0.34
SH3TC1-220ENST00000511002 FCN3O75636 299 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms