RNA–Protein interactions for RNA: ENST00000510003.5

SNCAIP-214, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,039 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-214ENST00000510003 LRRC61Q9BV99 259 aa12.74□□□□□ -0.37
SNCAIP-214ENST00000510003 C11orf1Q9H5F2 150 aa12.74□□□□□ -0.37
SNCAIP-214ENST00000510003 ATXN7L1Q9ULK2 861 aaPredicted RBP12.74□□□□□ -0.37
SNCAIP-214ENST00000510003 RCL1Q9Y2P8 373 aaKnown RBP12.74□□□□□ -0.37
SNCAIP-214ENST00000510003 MMP24Q9Y5R2 645 aa12.74□□□□□ -0.37
SNCAIP-214ENST00000510003 PHF3Q92576 2039 aaKnown RBP12.74□□□□□ -0.37
SNCAIP-214ENST00000510003 BRWD1Q9NSI6 2320 aa12.74□□□□□ -0.37
SNCAIP-214ENST00000510003 DOCK8Q8NF50 2099 aa12.74□□□□□ -0.37
SNCAIP-214ENST00000510003 ZNF724A8MTY0 619 aa12.74□□□□□ -0.37
SNCAIP-214ENST00000510003 RER1O15258 196 aa12.74□□□□□ -0.37
SNCAIP-214ENST00000510003 HSPA12AO43301 675 aa12.74□□□□□ -0.37
SNCAIP-214ENST00000510003 CDS2O95674 445 aa12.74□□□□□ -0.37
SNCAIP-214ENST00000510003 RD3LP0DJH9 198 aa12.74□□□□□ -0.37
SNCAIP-214ENST00000510003 FCGR2AP12318 317 aa12.74□□□□□ -0.37
SNCAIP-214ENST00000510003 CTHP32929 405 aa12.74□□□□□ -0.37
SNCAIP-214ENST00000510003 EFNA3P52797 238 aa12.74□□□□□ -0.37
SNCAIP-214ENST00000510003 RND3P61587 244 aa12.74□□□□□ -0.37
SNCAIP-214ENST00000510003 HIST3H3Q16695 136 aa12.74□□□□□ -0.37
SNCAIP-214ENST00000510003 TMEM31Q5JXX7 168 aa12.74□□□□□ -0.37
SNCAIP-214ENST00000510003 SLC22A25Q6T423 547 aa12.74□□□□□ -0.37
SNCAIP-214ENST00000510003 DPPA3Q6W0C5 159 aa12.74□□□□□ -0.37
SNCAIP-214ENST00000510003 SSX9Q7RTT3 188 aa12.74□□□□□ -0.37
SNCAIP-214ENST00000510003 ZNF429Q86V71 674 aa12.74□□□□□ -0.37
SNCAIP-214ENST00000510003 FBXL14Q8N1E6 418 aa12.74□□□□□ -0.37
SNCAIP-214ENST00000510003 CCDC71LQ8N9Z2 235 aa12.74□□□□□ -0.37
SNCAIP-214ENST00000510003 OR2G3Q8NGZ4 309 aa12.74□□□□□ -0.37
SNCAIP-214ENST00000510003 RBMXL1Q96E39 390 aaKnown RBP12.74□□□□□ -0.37
SNCAIP-214ENST00000510003 CDCA3Q99618 268 aaPredicted RBP12.74□□□□□ -0.37
SNCAIP-214ENST00000510003 NIPSNAP3BQ9BS92 247 aa12.74□□□□□ -0.37
SNCAIP-214ENST00000510003 TSTD3H0UI37 97 aa12.73□□□□□ -0.37
SNCAIP-214ENST00000510003 TRAF3IP2O43734 574 aaPredicted RBP12.73□□□□□ -0.37
SNCAIP-214ENST00000510003 CXCL1P09341 107 aa12.73□□□□□ -0.37
SNCAIP-214ENST00000510003 NR2C1P13056 603 aa12.73□□□□□ -0.37
SNCAIP-214ENST00000510003 FBLP22087 321 aaKnown RBP12.73□□□□□ -0.37
SNCAIP-214ENST00000510003 MSX1P28360 303 aa12.73□□□□□ -0.37
SNCAIP-214ENST00000510003 CSNK1A1P48729 337 aa12.73□□□□□ -0.37
SNCAIP-214ENST00000510003 LSM6P62312 80 aaKnown RBP12.73□□□□□ -0.37
SNCAIP-214ENST00000510003 DLK1P80370 383 aa12.73□□□□□ -0.37
SNCAIP-214ENST00000510003 KIAA0895LQ68EN5 471 aa12.73□□□□□ -0.37
SNCAIP-214ENST00000510003 OGFOD3Q6PK18 319 aa12.73□□□□□ -0.37
SNCAIP-214ENST00000510003 OR2C3Q8N628 320 aa12.73□□□□□ -0.37
SNCAIP-214ENST00000510003 OR52M1Q8NGK5 317 aa12.73□□□□□ -0.37
SNCAIP-214ENST00000510003 RNASE11Q8TAA1 199 aaKnown RBP12.73□□□□□ -0.37
SNCAIP-214ENST00000510003 LYZL4Q96KX0 146 aa12.73□□□□□ -0.37
SNCAIP-214ENST00000510003 SLC25A31Q9H0C2 315 aa12.73□□□□□ -0.37
SNCAIP-214ENST00000510003 SLC2A9Q9NRM0 540 aa12.73□□□□□ -0.37
SNCAIP-214ENST00000510003 SDHAF3Q9NRP4 125 aa12.73□□□□□ -0.37
SNCAIP-214ENST00000510003 PCNX3Q9H6A9 2034 aa12.73□□□□□ -0.37
SNCAIP-214ENST00000510003 OR5H15A6NDH6 313 aa12.72□□□□□ -0.37
SNCAIP-214ENST00000510003 ARGFXA6NJG6 315 aa12.72□□□□□ -0.37
SNCAIP-214ENST00000510003 OR5H1A6NKK0 313 aa12.72□□□□□ -0.37
SNCAIP-214ENST00000510003 ZNF850A8MQ14 1090 aa12.72□□□□□ -0.37
SNCAIP-214ENST00000510003 HBE1P02100 147 aa12.72□□□□□ -0.37
SNCAIP-214ENST00000510003 ATP6V0CP27449 155 aa12.72□□□□□ -0.37
SNCAIP-214ENST00000510003 CDAP32320 146 aa12.72□□□□□ -0.37
SNCAIP-214ENST00000510003 GFERP55789 205 aa12.72□□□□□ -0.37
SNCAIP-214ENST00000510003 MYBPHQ13203 477 aa12.72□□□□□ -0.37
SNCAIP-214ENST00000510003 SP6Q3SY56 376 aa12.72□□□□□ -0.37
SNCAIP-214ENST00000510003 STX12Q86Y82 276 aa12.72□□□□□ -0.37
SNCAIP-214ENST00000510003 RNF138Q8WVD3 245 aa12.72□□□□□ -0.37
SNCAIP-214ENST00000510003 GNPNAT1Q96EK6 184 aaPredicted RBP12.72□□□□□ -0.37
SNCAIP-214ENST00000510003 NUDT22Q9BRQ3 303 aa12.72□□□□□ -0.37
SNCAIP-214ENST00000510003 LIME1Q9H400 295 aa12.72□□□□□ -0.37
SNCAIP-214ENST00000510003 FAM86C1Q9NVL1 165 aa12.72□□□□□ -0.37
SNCAIP-214ENST00000510003 TMEM242Q9NWH2 141 aa12.72□□□□□ -0.37
SNCAIP-214ENST00000510003 PTRH2Q9Y3E5 179 aaKnown RBP12.72□□□□□ -0.37
SNCAIP-214ENST00000510003 ZNF727A8MUV8 499 aa12.72□□□□□ -0.37
SNCAIP-214ENST00000510003 ZNF732B4DXR9 585 aa12.72□□□□□ -0.37
SNCAIP-214ENST00000510003 SCAF4O95104 1147 aaKnown RBP12.72□□□□□ -0.37
SNCAIP-214ENST00000510003 PAX1P15863 534 aa12.72□□□□□ -0.37
SNCAIP-214ENST00000510003 DRD1P21728 446 aa12.72□□□□□ -0.37
SNCAIP-214ENST00000510003 GABRR1P24046 479 aa12.72□□□□□ -0.37
SNCAIP-214ENST00000510003 RNF4P78317 190 aa12.72□□□□□ -0.37
SNCAIP-214ENST00000510003 DLX2Q07687 328 aaPredicted RBP12.72□□□□□ -0.37
SNCAIP-214ENST00000510003 MFAP5Q13361 173 aa12.72□□□□□ -0.37
SNCAIP-214ENST00000510003 SMAD4Q13485 552 aaKnown RBP12.72□□□□□ -0.37
SNCAIP-214ENST00000510003 RSU1Q15404 277 aa12.72□□□□□ -0.37
SNCAIP-214ENST00000510003 TMEM92Q6UXU6 159 aa12.72□□□□□ -0.37
SNCAIP-214ENST00000510003 SPNS3Q6ZMD2 512 aa12.72□□□□□ -0.37
SNCAIP-214ENST00000510003 D2HGDHQ8N465 521 aa12.72□□□□□ -0.37
SNCAIP-214ENST00000510003 OR5R1Q8NH85 324 aa12.72□□□□□ -0.37
SNCAIP-214ENST00000510003 TOMM40LQ969M1 308 aa12.72□□□□□ -0.37
SNCAIP-214ENST00000510003 S100PBPQ96BU1 408 aa12.72□□□□□ -0.37
SNCAIP-214ENST00000510003 PLEKHF2Q9H8W4 249 aa12.72□□□□□ -0.37
SNCAIP-214ENST00000510003 ELL3Q9HB65 397 aaPredicted RBP12.72□□□□□ -0.37
SNCAIP-214ENST00000510003 AK3Q9UIJ7 227 aa12.72□□□□□ -0.37
SNCAIP-214ENST00000510003 UNC80Q8N2C7 3258 aa12.71□□□□□ -0.37
SNCAIP-214ENST00000510003 LOC102725191A0A1B0GVB3 256 aa12.71□□□□□ -0.37
SNCAIP-214ENST00000510003 H3BML4 177 aa12.71□□□□□ -0.37
SNCAIP-214ENST00000510003 MSTNO14793 375 aa12.71□□□□□ -0.37
SNCAIP-214ENST00000510003 ATXN8OSP0DMR3 200 aa12.71□□□□□ -0.37
SNCAIP-214ENST00000510003 CEACAM1P13688 526 aa12.71□□□□□ -0.37
SNCAIP-214ENST00000510003 ANOS1P23352 680 aa12.71□□□□□ -0.37
SNCAIP-214ENST00000510003 DDTP30046 118 aa12.71□□□□□ -0.37
SNCAIP-214ENST00000510003 TAS2R60P59551 318 aa12.71□□□□□ -0.37
SNCAIP-214ENST00000510003 ERVFRD-1P60508 538 aa12.71□□□□□ -0.37
SNCAIP-214ENST00000510003 CCL20P78556 96 aa12.71□□□□□ -0.37
SNCAIP-214ENST00000510003 ICAM4Q14773 271 aa12.71□□□□□ -0.37
SNCAIP-214ENST00000510003 TMEM176BQ3YBM2 270 aaPredicted RBP12.71□□□□□ -0.37
SNCAIP-214ENST00000510003 KHDC3LQ587J8 217 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 110.9 ms