RNA–Protein interactions for RNA: ENST00000508736.1

PRPF40B-203, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,861 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-203ENST00000508736 PRRG4Q9BZD6 226 aa10.02□□□□□ -0.8
PRPF40B-203ENST00000508736 METTL8Q9H825 291 aaKnown RBP10.02□□□□□ -0.8
PRPF40B-203ENST00000508736 HSF4Q9ULV5 492 aa10.02□□□□□ -0.8
PRPF40B-203ENST00000508736 ZNF175Q9Y473 711 aa10.02□□□□□ -0.8
PRPF40B-203ENST00000508736 FAM230AA0A1W2PPH8 454 aa10.02□□□□□ -0.81
PRPF40B-203ENST00000508736 ZNF891A8MT65 544 aaPredicted RBP10.02□□□□□ -0.81
PRPF40B-203ENST00000508736 C1QTNF9BB2RNN3 333 aa10.02□□□□□ -0.81
PRPF40B-203ENST00000508736 ZNF587BE7ETH6 402 aa10.02□□□□□ -0.81
PRPF40B-203ENST00000508736 SDCBPO00560 298 aaPredicted RBP10.02□□□□□ -0.81
PRPF40B-203ENST00000508736 XRCC2O43543 280 aa10.02□□□□□ -0.81
PRPF40B-203ENST00000508736 IGHG3P01860 377 aa10.02□□□□□ -0.81
PRPF40B-203ENST00000508736 C1QTNF9P0C862 333 aa10.02□□□□□ -0.81
PRPF40B-203ENST00000508736 TPT1P13693 172 aaKnown RBP10.02□□□□□ -0.81
PRPF40B-203ENST00000508736 WT1P19544 449 aaPredicted RBP10.02□□□□□ -0.81
PRPF40B-203ENST00000508736 ACKR3P25106 362 aa10.02□□□□□ -0.81
PRPF40B-203ENST00000508736 PAN3Q58A45 887 aaKnown RBP10.02□□□□□ -0.81
PRPF40B-203ENST00000508736 C6orf201Q7Z4U5 140 aa10.02□□□□□ -0.81
PRPF40B-203ENST00000508736 RELL2Q8NC24 303 aaPredicted RBP10.02□□□□□ -0.81
PRPF40B-203ENST00000508736 FDCSPQ8NFU4 85 aa10.02□□□□□ -0.81
PRPF40B-203ENST00000508736 OR2AE1Q8NHA4 323 aa10.02□□□□□ -0.81
PRPF40B-203ENST00000508736 SNIP1Q8TAD8 396 aaKnown RBP10.02□□□□□ -0.81
PRPF40B-203ENST00000508736 STOML3Q8TAV4 291 aa10.02□□□□□ -0.81
PRPF40B-203ENST00000508736 MRPS24Q96EL2 167 aaKnown RBP10.02□□□□□ -0.81
PRPF40B-203ENST00000508736 WDYHV1Q96HA8 205 aa10.02□□□□□ -0.81
PRPF40B-203ENST00000508736 WNT5BQ9H1J7 359 aa10.02□□□□□ -0.81
PRPF40B-203ENST00000508736 LDAHQ9H6V9 325 aa10.02□□□□□ -0.81
PRPF40B-203ENST00000508736 SLC7A10Q9NS82 523 aa10.02□□□□□ -0.81
PRPF40B-203ENST00000508736 DKK4Q9UBT3 224 aa10.02□□□□□ -0.81
PRPF40B-203ENST00000508736 SLC7A11Q9UPY5 501 aa10.02□□□□□ -0.81
PRPF40B-203ENST00000508736 LIPGQ9Y5X9 500 aa10.02□□□□□ -0.81
PRPF40B-203ENST00000508736 DMXL2Q8TDJ6 3036 aa10.01□□□□□ -0.81
PRPF40B-203ENST00000508736 CEACAM4O75871 244 aa10.01□□□□□ -0.81
PRPF40B-203ENST00000508736 NRASP01111 189 aa10.01□□□□□ -0.81
PRPF40B-203ENST00000508736 IFNA2P01563 188 aa10.01□□□□□ -0.81
PRPF40B-203ENST00000508736 COX5BP10606 129 aa10.01□□□□□ -0.81
PRPF40B-203ENST00000508736 DTYMKP23919 212 aa10.01□□□□□ -0.81
PRPF40B-203ENST00000508736 RBMXP38159 391 aaKnown RBP10.01□□□□□ -0.81
PRPF40B-203ENST00000508736 SUPT4H1P63272 117 aaKnown RBP10.01□□□□□ -0.81
PRPF40B-203ENST00000508736 NAAAQ02083 359 aa10.01□□□□□ -0.81
PRPF40B-203ENST00000508736 BEX5Q5H9J7 111 aa10.01□□□□□ -0.81
PRPF40B-203ENST00000508736 TMEM42Q69YG0 159 aa10.01□□□□□ -0.81
PRPF40B-203ENST00000508736 PRSS54Q6PEW0 395 aa10.01□□□□□ -0.81
PRPF40B-203ENST00000508736 AKR7LQ8NHP1 331 aa10.01□□□□□ -0.81
PRPF40B-203ENST00000508736 APH1AQ96BI3 265 aa10.01□□□□□ -0.81
PRPF40B-203ENST00000508736 C2orf50Q96LR7 162 aa10.01□□□□□ -0.81
PRPF40B-203ENST00000508736 ZNF75AQ96N20 296 aa10.01□□□□□ -0.81
PRPF40B-203ENST00000508736 WDR13Q9H1Z4 485 aa10.01□□□□□ -0.81
PRPF40B-203ENST00000508736 C1orf123Q9NWV4 160 aa10.01□□□□□ -0.81
PRPF40B-203ENST00000508736 TRAV17A0A0B4J275 112 aa10□□□□□ -0.81
PRPF40B-203ENST00000508736 PI3P19957 117 aa10□□□□□ -0.81
PRPF40B-203ENST00000508736 EIF2S3P41091 472 aaKnown RBP10□□□□□ -0.81
PRPF40B-203ENST00000508736 CCL11P51671 97 aa10□□□□□ -0.81
PRPF40B-203ENST00000508736 FUT6P51993 359 aa10□□□□□ -0.81
PRPF40B-203ENST00000508736 RNFT1Q5M7Z0 435 aa10□□□□□ -0.81
PRPF40B-203ENST00000508736 FAM74A1Q5RGS3 127 aa10□□□□□ -0.81
PRPF40B-203ENST00000508736 ASCL4Q6XD76 172 aa10□□□□□ -0.81
PRPF40B-203ENST00000508736 SGPP2Q8IWX5 399 aa10□□□□□ -0.81
PRPF40B-203ENST00000508736 MCEMP1Q8IX19 187 aa10□□□□□ -0.81
PRPF40B-203ENST00000508736 SREK1IP1Q8N9Q2 155 aaPredicted RBP10□□□□□ -0.81
PRPF40B-203ENST00000508736 ZSCAN4Q8NAM6 433 aaPredicted RBP10□□□□□ -0.81
PRPF40B-203ENST00000508736 MAFIPQ8WZ33 124 aa10□□□□□ -0.81
PRPF40B-203ENST00000508736 PIK3IP1Q96FE7 263 aa10□□□□□ -0.81
PRPF40B-203ENST00000508736 C1QTNF6Q9BXI9 259 aa10□□□□□ -0.81
PRPF40B-203ENST00000508736 PRDM14Q9GZV8 571 aa10□□□□□ -0.81
PRPF40B-203ENST00000508736 DEFB127Q9H1M4 99 aa10□□□□□ -0.81
PRPF40B-203ENST00000508736 CALHM2Q9HA72 323 aa10□□□□□ -0.81
PRPF40B-203ENST00000508736 NECAP2Q9NVZ3 263 aa10□□□□□ -0.81
PRPF40B-203ENST00000508736 IL36GQ9NZH8 169 aa10□□□□□ -0.81
PRPF40B-203ENST00000508736 SPRR3Q9UBC9 169 aa10□□□□□ -0.81
PRPF40B-203ENST00000508736 ANXA10Q9UJ72 324 aa10□□□□□ -0.81
PRPF40B-203ENST00000508736 ZFHX4Q86UP3 3567 aa10□□□□□ -0.81
PRPF40B-203ENST00000508736 ZNF816-ZNF321PA0A0X1KG74 233 aa10□□□□□ -0.81
PRPF40B-203ENST00000508736 hCG_38984A0A1B0GV85 526 aa10□□□□□ -0.81
PRPF40B-203ENST00000508736 F8VVB4 439 aa10□□□□□ -0.81
PRPF40B-203ENST00000508736 F8VWA3 439 aa10□□□□□ -0.81
PRPF40B-203ENST00000508736 CTSDP07339 412 aaPredicted RBP10□□□□□ -0.81
PRPF40B-203ENST00000508736 LYL1P12980 280 aa10□□□□□ -0.81
PRPF40B-203ENST00000508736 GLRA1P23415 457 aa10□□□□□ -0.81
PRPF40B-203ENST00000508736 ARF1P84077 181 aaKnown RBP10□□□□□ -0.81
PRPF40B-203ENST00000508736 HGFACQ04756 655 aa10□□□□□ -0.81
PRPF40B-203ENST00000508736 ANKRD55Q3KP44 614 aa10□□□□□ -0.81
PRPF40B-203ENST00000508736 RPUSD3Q6P087 351 aaKnown RBP10□□□□□ -0.81
PRPF40B-203ENST00000508736 UNQ6494/PRO21346Q6UXR6 183 aa10□□□□□ -0.81
PRPF40B-203ENST00000508736 DPPA2Q7Z7J5 298 aa10□□□□□ -0.81
PRPF40B-203ENST00000508736 FGFBP3Q8TAT2 258 aa10□□□□□ -0.81
PRPF40B-203ENST00000508736 CMSS1Q9BQ75 279 aaKnown RBP10□□□□□ -0.81
PRPF40B-203ENST00000508736 ZNF2Q9BSG1 426 aaPredicted RBP10□□□□□ -0.81
PRPF40B-203ENST00000508736 PIGMQ9H3S5 423 aa10□□□□□ -0.81
PRPF40B-203ENST00000508736 TAS2R3Q9NYW6 316 aa10□□□□□ -0.81
PRPF40B-203ENST00000508736 DNAJB11Q9UBS4 358 aa10□□□□□ -0.81
PRPF40B-203ENST00000508736 GPR160Q9UJ42 338 aa10□□□□□ -0.81
PRPF40B-203ENST00000508736 RAXQ9Y2V3 346 aa10□□□□□ -0.81
PRPF40B-203ENST00000508736 APC2O95996 2303 aa9.99□□□□□ -0.81
PRPF40B-203ENST00000508736 CFAP47Q6ZTR5 3102 aa9.99□□□□□ -0.81
PRPF40B-203ENST00000508736 SPRY1O43609 319 aaPredicted RBP9.99□□□□□ -0.81
PRPF40B-203ENST00000508736 ANGPTL7O43827 346 aa9.99□□□□□ -0.81
PRPF40B-203ENST00000508736 ADAP1O75689 374 aa9.99□□□□□ -0.81
PRPF40B-203ENST00000508736 KNG1P01042 644 aa9.99□□□□□ -0.81
PRPF40B-203ENST00000508736 EIF5AP63241 154 aaKnown RBP9.99□□□□□ -0.81
PRPF40B-203ENST00000508736 TAGLNQ01995 201 aaKnown RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms