RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 ELMO1Q92556 727 aa2.4□□□□□ -2.03
TOPBP1-206ENST00000508524 UFD1Q92890 307 aa2.4□□□□□ -2.03
TOPBP1-206ENST00000508524 SMIM10Q96HG1 83 aa2.4□□□□□ -2.03
TOPBP1-206ENST00000508524 JSRP1Q96MG2 331 aaPredicted RBP2.4□□□□□ -2.03
TOPBP1-206ENST00000508524 TSGA13Q96PP4 275 aa2.4□□□□□ -2.03
TOPBP1-206ENST00000508524 AICDAQ9GZX7 198 aa2.4□□□□□ -2.03
TOPBP1-206ENST00000508524 SOX21Q9Y651 276 aaPredicted RBP2.4□□□□□ -2.03
TOPBP1-206ENST00000508524 CHCHD2Q9Y6H1 151 aaPredicted RBP2.4□□□□□ -2.03
TOPBP1-206ENST00000508524 DYNC1H1Q14204 4646 aaKnown RBP2.4□□□□□ -2.03
TOPBP1-206ENST00000508524 HSPG2P98160 4391 aa2.4□□□□□ -2.03
TOPBP1-206ENST00000508524 DMBT1Q9UGM3 2413 aaPredicted RBP2.39□□□□□ -2.03
TOPBP1-206ENST00000508524 OR51F1A6NGY5 319 aa2.39□□□□□ -2.03
TOPBP1-206ENST00000508524 IQCF5A8MTL0 148 aa2.39□□□□□ -2.03
TOPBP1-206ENST00000508524 H7C417 338 aa2.39□□□□□ -2.03
TOPBP1-206ENST00000508524 K7EIL1 84 aa2.39□□□□□ -2.03
TOPBP1-206ENST00000508524 LIN7AO14910 233 aaPredicted RBP2.39□□□□□ -2.03
TOPBP1-206ENST00000508524 CHST10O43529 356 aa2.39□□□□□ -2.03
TOPBP1-206ENST00000508524 TRAPPC6AO75865 159 aa2.39□□□□□ -2.03
TOPBP1-206ENST00000508524 VAMP5O95183 116 aa2.39□□□□□ -2.03
TOPBP1-206ENST00000508524 OXSR1O95747 527 aaPredicted RBP2.39□□□□□ -2.03
TOPBP1-206ENST00000508524 C1QAP02745 245 aa2.39□□□□□ -2.03
TOPBP1-206ENST00000508524 LINC00869P0C866 280 aa2.39□□□□□ -2.03
TOPBP1-206ENST00000508524 IL12AP29459 219 aa2.39□□□□□ -2.03
TOPBP1-206ENST00000508524 NCBP2P52298 156 aaKnown RBP eCLIP2.39□□□□□ -2.03
TOPBP1-206ENST00000508524 CLDN18P56856 261 aa2.39□□□□□ -2.03
TOPBP1-206ENST00000508524 SLC25A11Q02978 314 aaKnown RBP2.39□□□□□ -2.03
TOPBP1-206ENST00000508524 DOC2AQ14183 400 aa2.39□□□□□ -2.03
TOPBP1-206ENST00000508524 SELPLGQ14242 412 aa2.39□□□□□ -2.03
TOPBP1-206ENST00000508524 PAFAH1B3Q15102 231 aaKnown RBP2.39□□□□□ -2.03
TOPBP1-206ENST00000508524 DUSP7Q16829 419 aa2.39□□□□□ -2.03
TOPBP1-206ENST00000508524 ZBED5Q49AG3 693 aa2.39□□□□□ -2.03
TOPBP1-206ENST00000508524 LINC00173Q6ZV60 143 aa2.39□□□□□ -2.03
TOPBP1-206ENST00000508524 GLT6D1Q7Z4J2 308 aa2.39□□□□□ -2.03
TOPBP1-206ENST00000508524 CDKL3Q8IVW4 592 aaPredicted RBP2.39□□□□□ -2.03
TOPBP1-206ENST00000508524 ACOT4Q8N9L9 421 aa2.39□□□□□ -2.03
TOPBP1-206ENST00000508524 SYT14Q8NB59 555 aa2.39□□□□□ -2.03
TOPBP1-206ENST00000508524 OR10G4Q8NGN3 311 aa2.39□□□□□ -2.03
TOPBP1-206ENST00000508524 DOK4Q8TEW6 326 aa2.39□□□□□ -2.03
TOPBP1-206ENST00000508524 S100PBPQ96BU1 408 aa2.39□□□□□ -2.03
TOPBP1-206ENST00000508524 DCUN1D1Q96GG9 259 aa2.39□□□□□ -2.03
TOPBP1-206ENST00000508524 COPS8Q99627 209 aa2.39□□□□□ -2.03
TOPBP1-206ENST00000508524 GBA3Q9H227 469 aa2.39□□□□□ -2.03
TOPBP1-206ENST00000508524 ADAP2Q9NPF8 381 aa2.39□□□□□ -2.03
TOPBP1-206ENST00000508524 TAC3Q9UHF0 121 aa2.39□□□□□ -2.03
TOPBP1-206ENST00000508524 C15orf41Q9Y2V0 281 aa2.39□□□□□ -2.03
TOPBP1-206ENST00000508524 SCAMP2O15127 329 aaKnown RBP2.38□□□□□ -2.03
TOPBP1-206ENST00000508524 AQP8O94778 261 aa2.38□□□□□ -2.03
TOPBP1-206ENST00000508524 C1orf105O95561 183 aa2.38□□□□□ -2.03
TOPBP1-206ENST00000508524 ETHE1O95571 254 aa2.38□□□□□ -2.03
TOPBP1-206ENST00000508524 DIRAS3O95661 229 aa2.38□□□□□ -2.03
TOPBP1-206ENST00000508524 AGTP01019 485 aa2.38□□□□□ -2.03
TOPBP1-206ENST00000508524 ERGP11308 486 aa2.38□□□□□ -2.03
TOPBP1-206ENST00000508524 UCHL3P15374 230 aa2.38□□□□□ -2.03
TOPBP1-206ENST00000508524 SYKP43405 635 aa2.38□□□□□ -2.03
TOPBP1-206ENST00000508524 EFNA4P52798 201 aa2.38□□□□□ -2.03
TOPBP1-206ENST00000508524 ESRRGP62508 458 aa2.38□□□□□ -2.03
TOPBP1-206ENST00000508524 KMT2AQ03164 3969 aa2.38□□□□□ -2.03
TOPBP1-206ENST00000508524 PPIDQ08752 370 aaKnown RBP2.38□□□□□ -2.03
TOPBP1-206ENST00000508524 RCAN2Q14206 197 aa2.38□□□□□ -2.03
TOPBP1-206ENST00000508524 DEFB134Q4QY38 66 aa2.38□□□□□ -2.03
TOPBP1-206ENST00000508524 ZNF684Q5T5D7 378 aa2.38□□□□□ -2.03
TOPBP1-206ENST00000508524 DCUN1D2Q6PH85 259 aa2.38□□□□□ -2.03
TOPBP1-206ENST00000508524 DGAT2L6Q6ZPD8 337 aa2.38□□□□□ -2.03
TOPBP1-206ENST00000508524 KRT222Q8N1A0 295 aa2.38□□□□□ -2.03
TOPBP1-206ENST00000508524 OSR2Q8N2R0 312 aa2.38□□□□□ -2.03
TOPBP1-206ENST00000508524 SIGLECL1Q8N7X8 197 aa2.38□□□□□ -2.03
TOPBP1-206ENST00000508524 LINC00304Q8N9R0 145 aa2.38□□□□□ -2.03
TOPBP1-206ENST00000508524 FAM83FQ8NEG4 500 aaPredicted RBP2.38□□□□□ -2.03
TOPBP1-206ENST00000508524 IPMKQ8NFU5 416 aa2.38□□□□□ -2.03
TOPBP1-206ENST00000508524 OR52K1Q8NGK4 314 aa2.38□□□□□ -2.03
TOPBP1-206ENST00000508524 FNDC9Q8TBE3 224 aa2.38□□□□□ -2.03
TOPBP1-206ENST00000508524 NELFBQ8WX92 580 aa2.38□□□□□ -2.03
TOPBP1-206ENST00000508524 DNAJC1Q96KC8 554 aaKnown RBP2.38□□□□□ -2.03
TOPBP1-206ENST00000508524 ZFP3Q96NJ6 502 aa2.38□□□□□ -2.03
TOPBP1-206ENST00000508524 PRAP1Q96NZ9 151 aa2.38□□□□□ -2.03
TOPBP1-206ENST00000508524 HBEGFQ99075 208 aa2.38□□□□□ -2.03
TOPBP1-206ENST00000508524 DOHHQ9BU89 302 aa2.38□□□□□ -2.03
TOPBP1-206ENST00000508524 TRABDQ9H4I3 376 aa2.38□□□□□ -2.03
TOPBP1-206ENST00000508524 ZNRD1Q9P1U0 126 aa2.38□□□□□ -2.03
TOPBP1-206ENST00000508524 ACTR3BQ9P1U1 418 aa2.38□□□□□ -2.03
TOPBP1-206ENST00000508524 CLEC4AQ9UMR7 237 aa2.38□□□□□ -2.03
TOPBP1-206ENST00000508524 BOKQ9UMX3 212 aaPredicted RBP2.38□□□□□ -2.03
TOPBP1-206ENST00000508524 ARHGAP32A7KAX9 2087 aa2.38□□□□□ -2.03
TOPBP1-206ENST00000508524 FAT2Q9NYQ8 4349 aa2.37□□□□□ -2.03
TOPBP1-206ENST00000508524 SLC22A20A6NK97 555 aa2.37□□□□□ -2.03
TOPBP1-206ENST00000508524 LYNX1G3V0Z9 82 aa2.37□□□□□ -2.03
TOPBP1-206ENST00000508524 GOLGA8MH3BSY2 632 aa2.37□□□□□ -2.03
TOPBP1-206ENST00000508524 RBFOX2O43251 390 aaKnown RBP eCLIP2.37□□□□□ -2.03
TOPBP1-206ENST00000508524 GCM2O75603 506 aaPredicted RBP2.37□□□□□ -2.03
TOPBP1-206ENST00000508524 CALB1P05937 261 aa2.37□□□□□ -2.03
TOPBP1-206ENST00000508524 TACSTD2P09758 323 aa2.37□□□□□ -2.03
TOPBP1-206ENST00000508524 LYNX1P0DP58 116 aa2.37□□□□□ -2.03
TOPBP1-206ENST00000508524 PRPS2P11908 318 aa2.37□□□□□ -2.03
TOPBP1-206ENST00000508524 ZNF708P17019 499 aa2.37□□□□□ -2.03
TOPBP1-206ENST00000508524 PAX7P23759 505 aa2.37□□□□□ -2.03
TOPBP1-206ENST00000508524 PRTN3P24158 256 aa2.37□□□□□ -2.03
TOPBP1-206ENST00000508524 CMPK1P30085 196 aa2.37□□□□□ -2.03
TOPBP1-206ENST00000508524 FBXW4P57775 412 aa2.37□□□□□ -2.03
TOPBP1-206ENST00000508524 PRDX1Q06830 199 aaKnown RBP2.37□□□□□ -2.03
TOPBP1-206ENST00000508524 ZNHIT3Q15649 155 aaPredicted RBP2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms