RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 BRD3OSQ6XYD6 125 aa16.37■□□□□ 0.21
SFXN1-209ENST00000508290 SLC25A26Q70HW3 274 aa16.37■□□□□ 0.21
SFXN1-209ENST00000508290 VMO1Q7Z5L0 202 aa16.37■□□□□ 0.21
SFXN1-209ENST00000508290 PARP16Q8N5Y8 322 aa16.37■□□□□ 0.21
SFXN1-209ENST00000508290 CD177Q8N6Q3 437 aa16.37■□□□□ 0.21
SFXN1-209ENST00000508290 OR5D13Q8NGL4 314 aa16.37■□□□□ 0.21
SFXN1-209ENST00000508290 CNIH3Q8TBE1 160 aa16.37■□□□□ 0.21
SFXN1-209ENST00000508290 GCDHQ92947 438 aaPredicted RBP16.37■□□□□ 0.21
SFXN1-209ENST00000508290 LHX4Q969G2 390 aa16.37■□□□□ 0.21
SFXN1-209ENST00000508290 ZNF48Q96MX3 618 aaPredicted RBP16.37■□□□□ 0.21
SFXN1-209ENST00000508290 ZCCHC4Q9H5U6 513 aa16.37■□□□□ 0.21
SFXN1-209ENST00000508290 CNOT2Q9NZN8 540 aaKnown RBP16.37■□□□□ 0.21
SFXN1-209ENST00000508290 DHDHQ9UQ10 334 aa16.37■□□□□ 0.21
SFXN1-209ENST00000508290 IGKV1-27A0A075B6S5 117 aa16.36■□□□□ 0.21
SFXN1-209ENST00000508290 IGKV1-9A0A0C4DH69 117 aa16.36■□□□□ 0.21
SFXN1-209ENST00000508290 TMEM89A2RUT3 159 aa16.36■□□□□ 0.21
SFXN1-209ENST00000508290 EFCAB10A6NFE3 127 aa16.36■□□□□ 0.21
SFXN1-209ENST00000508290 H0YJX3 145 aa16.36■□□□□ 0.21
SFXN1-209ENST00000508290 CLIC3O95833 236 aa16.36■□□□□ 0.21
SFXN1-209ENST00000508290 CD2P06729 351 aa16.36■□□□□ 0.21
SFXN1-209ENST00000508290 SPIN3Q5JUX0 258 aa16.36■□□□□ 0.21
SFXN1-209ENST00000508290 C12orf54Q6X4T0 127 aa16.36■□□□□ 0.21
SFXN1-209ENST00000508290 SAXO1Q8IYX7 474 aa16.36■□□□□ 0.21
SFXN1-209ENST00000508290 FGFRL1Q8N441 504 aa16.36■□□□□ 0.21
SFXN1-209ENST00000508290 OR51A4Q8NGJ6 313 aa16.36■□□□□ 0.21
SFXN1-209ENST00000508290 OR52N1Q8NH53 320 aa16.36■□□□□ 0.21
SFXN1-209ENST00000508290 TMEM80Q96HE8 168 aa16.36■□□□□ 0.21
SFXN1-209ENST00000508290 MTCH1Q9NZJ7 389 aa16.36■□□□□ 0.21
SFXN1-209ENST00000508290 GLS2Q9UI32 602 aa16.36■□□□□ 0.21
SFXN1-209ENST00000508290 PCDHGB5Q9Y5G0 923 aa16.36■□□□□ 0.21
SFXN1-209ENST00000508290 POMT1Q9Y6A1 747 aa16.36■□□□□ 0.21
SFXN1-209ENST00000508290 TK1P04183 234 aa16.35■□□□□ 0.21
SFXN1-209ENST00000508290 RPL31P62899 125 aaKnown RBP16.35■□□□□ 0.21
SFXN1-209ENST00000508290 SLC34A1Q06495 639 aa16.35■□□□□ 0.21
SFXN1-209ENST00000508290 PDZK1IP1Q13113 114 aa16.35■□□□□ 0.21
SFXN1-209ENST00000508290 DEFB112Q30KQ8 113 aa16.35■□□□□ 0.21
SFXN1-209ENST00000508290 OR10AC1Q8NH08 325 aa16.35■□□□□ 0.21
SFXN1-209ENST00000508290 GPR148Q8TDV2 347 aa16.35■□□□□ 0.21
SFXN1-209ENST00000508290 TSEN15Q8WW01 171 aaKnown RBP16.35■□□□□ 0.21
SFXN1-209ENST00000508290 SLAMF9Q96A28 289 aa16.35■□□□□ 0.21
SFXN1-209ENST00000508290 PLCXD1Q9NUJ7 323 aa16.35■□□□□ 0.21
SFXN1-209ENST00000508290 BABAM2Q9NXR7 383 aa16.35■□□□□ 0.21
SFXN1-209ENST00000508290 OR14J1Q9UGF5 321 aa16.35■□□□□ 0.21
SFXN1-209ENST00000508290 E9PI62 339 aa16.34■□□□□ 0.21
SFXN1-209ENST00000508290 K7N7A8 449 aa16.34■□□□□ 0.21
SFXN1-209ENST00000508290 SULT1B1O43704 296 aa16.34■□□□□ 0.21
SFXN1-209ENST00000508290 ETV1P50549 477 aa16.34■□□□□ 0.21
SFXN1-209ENST00000508290 RPL15P61313 204 aaKnown RBP16.34■□□□□ 0.21
SFXN1-209ENST00000508290 ACSM1Q08AH1 577 aa16.34■□□□□ 0.21
SFXN1-209ENST00000508290 FOXL1Q12952 345 aa16.34■□□□□ 0.21
SFXN1-209ENST00000508290 CDK5R1Q15078 307 aa16.34■□□□□ 0.21
SFXN1-209ENST00000508290 SLC9A3R2Q15599 337 aa16.34■□□□□ 0.21
SFXN1-209ENST00000508290 Q6YL49 198 aa16.34■□□□□ 0.21
SFXN1-209ENST00000508290 ZSCAN4Q8NAM6 433 aaPredicted RBP16.34■□□□□ 0.21
SFXN1-209ENST00000508290 OR13C9Q8NGT0 318 aa16.34■□□□□ 0.21
SFXN1-209ENST00000508290 RPS4Y2Q8TD47 263 aa16.34■□□□□ 0.21
SFXN1-209ENST00000508290 FBLIM1Q8WUP2 373 aa16.34■□□□□ 0.21
SFXN1-209ENST00000508290 SSMEM1Q8WWF3 244 aa16.34■□□□□ 0.21
SFXN1-209ENST00000508290 EMG1Q92979 244 aaKnown RBP16.34■□□□□ 0.21
SFXN1-209ENST00000508290 ANKRD65E5RJM6 399 aa16.33■□□□□ 0.2
SFXN1-209ENST00000508290 MAGEB3O15480 346 aa16.33■□□□□ 0.2
SFXN1-209ENST00000508290 HKR1P10072 659 aa16.33■□□□□ 0.2
SFXN1-209ENST00000508290 POU3F4P49335 361 aa16.33■□□□□ 0.2
SFXN1-209ENST00000508290 BMXP51813 675 aa16.33■□□□□ 0.2
SFXN1-209ENST00000508290 UBE2E1P51965 193 aa16.33■□□□□ 0.2
SFXN1-209ENST00000508290 TAS2R43P59537 309 aa16.33■□□□□ 0.2
SFXN1-209ENST00000508290 ZNF146Q15072 292 aa16.33■□□□□ 0.2
SFXN1-209ENST00000508290 LDLRAD3Q86YD5 345 aa16.33■□□□□ 0.2
SFXN1-209ENST00000508290 FAM185AQ8N0U4 392 aa16.33■□□□□ 0.2
SFXN1-209ENST00000508290 FAM58AQ8N1B3 248 aa16.33■□□□□ 0.2
SFXN1-209ENST00000508290 Q8N7P7 452 aa16.33■□□□□ 0.2
SFXN1-209ENST00000508290 PPP1R35Q8TAP8 253 aa16.33■□□□□ 0.2
SFXN1-209ENST00000508290 SMIM19Q96E16 107 aa16.33■□□□□ 0.2
SFXN1-209ENST00000508290 C1orf147Q96MC9 270 aaPredicted RBP16.33■□□□□ 0.2
SFXN1-209ENST00000508290 PDCD1LG2Q9BQ51 273 aa16.33■□□□□ 0.2
SFXN1-209ENST00000508290 FAM96BQ9Y3D0 163 aa16.33■□□□□ 0.2
SFXN1-209ENST00000508290 TFF1P04155 84 aa16.32■□□□□ 0.2
SFXN1-209ENST00000508290 HCKP08631 526 aa16.32■□□□□ 0.2
SFXN1-209ENST00000508290 FBP1P09467 338 aa16.32■□□□□ 0.2
SFXN1-209ENST00000508290 RAB3AP20336 220 aa16.32■□□□□ 0.2
SFXN1-209ENST00000508290 ST3GAL4Q11206 333 aa16.32■□□□□ 0.2
SFXN1-209ENST00000508290 RUSC1-AS1Q66K80 236 aa16.32■□□□□ 0.2
SFXN1-209ENST00000508290 OR8H2Q8N162 312 aa16.32■□□□□ 0.2
SFXN1-209ENST00000508290 ASCC1Q8N9N2 400 aaKnown RBP16.32■□□□□ 0.2
SFXN1-209ENST00000508290 TFAP2CQ92754 450 aa16.32■□□□□ 0.2
SFXN1-209ENST00000508290 SNX22Q96L94 193 aa16.32■□□□□ 0.2
SFXN1-209ENST00000508290 VCX3BQ9H321 246 aa16.32■□□□□ 0.2
SFXN1-209ENST00000508290 SIRT7Q9NRC8 400 aa16.32■□□□□ 0.2
SFXN1-209ENST00000508290 SF3B6Q9Y3B4 125 aaKnown RBP16.32■□□□□ 0.2
SFXN1-209ENST00000508290 OGG1O15527 345 aa16.31■□□□□ 0.2
SFXN1-209ENST00000508290 HOXA3O43365 443 aaPredicted RBP16.31■□□□□ 0.2
SFXN1-209ENST00000508290 ZNF737O75373 536 aa16.31■□□□□ 0.2
SFXN1-209ENST00000508290 KDM4BO94953 1096 aa16.31■□□□□ 0.2
SFXN1-209ENST00000508290 HAND1O96004 215 aa16.31■□□□□ 0.2
SFXN1-209ENST00000508290 RBP4P02753 201 aa16.31■□□□□ 0.2
SFXN1-209ENST00000508290 COL10A1Q03692 680 aa16.31■□□□□ 0.2
SFXN1-209ENST00000508290 MEF2CQ06413 473 aaPredicted RBP16.31■□□□□ 0.2
SFXN1-209ENST00000508290 C16orf87Q6PH81 154 aa16.31■□□□□ 0.2
SFXN1-209ENST00000508290 GDPD3Q7L5L3 318 aa16.31■□□□□ 0.2
SFXN1-209ENST00000508290 TNFRSF14Q92956 283 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms