RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 NTSR1P30989 418 aa14.93□□□□□ -0.02
SQSTM1-211ENST00000506690 SFTPDP35247 375 aa14.93□□□□□ -0.02
SQSTM1-211ENST00000506690 YPEL5P62699 121 aa14.93□□□□□ -0.02
SQSTM1-211ENST00000506690 OGFOD3Q6PK18 319 aa14.93□□□□□ -0.02
SQSTM1-211ENST00000506690 SLC38A9Q8NBW4 561 aa14.93□□□□□ -0.02
SQSTM1-211ENST00000506690 OR4D5Q8NGN0 318 aa14.93□□□□□ -0.02
SQSTM1-211ENST00000506690 OR2AJ1Q8NGZ0 328 aa14.93□□□□□ -0.02
SQSTM1-211ENST00000506690 OR14L1PQ8NHC6 308 aa14.93□□□□□ -0.02
SQSTM1-211ENST00000506690 IGKV3D-11A0A0A0MRZ8 115 aa14.93□□□□□ -0.02
SQSTM1-211ENST00000506690 TNFP01375 233 aa14.93□□□□□ -0.02
SQSTM1-211ENST00000506690 DBHP09172 617 aa14.93□□□□□ -0.02
SQSTM1-211ENST00000506690 TMEM225BP0DP42 221 aa14.93□□□□□ -0.02
SQSTM1-211ENST00000506690 PPM1FP49593 454 aaPredicted RBP14.93□□□□□ -0.02
SQSTM1-211ENST00000506690 RND2P52198 227 aa14.93□□□□□ -0.02
SQSTM1-211ENST00000506690 CHAF1BQ13112 559 aa14.93□□□□□ -0.02
SQSTM1-211ENST00000506690 JOSD1Q15040 202 aaPredicted RBP14.93□□□□□ -0.02
SQSTM1-211ENST00000506690 TSPO2Q5TGU0 170 aa14.93□□□□□ -0.02
SQSTM1-211ENST00000506690 HLA-DQA1Q5Y7H0 255 aa14.93□□□□□ -0.02
SQSTM1-211ENST00000506690 ZNF385CQ66K41 422 aaPredicted RBP14.93□□□□□ -0.02
SQSTM1-211ENST00000506690 Q6ZSR6 202 aa14.93□□□□□ -0.02
SQSTM1-211ENST00000506690 TGIF2LXQ8IUE1 241 aa14.93□□□□□ -0.02
SQSTM1-211ENST00000506690 C1orf87Q8N0U7 546 aa14.93□□□□□ -0.02
SQSTM1-211ENST00000506690 OR2C3Q8N628 320 aa14.93□□□□□ -0.02
SQSTM1-211ENST00000506690 TOMM40LQ969M1 308 aa14.93□□□□□ -0.02
SQSTM1-211ENST00000506690 PNRC2Q9NPJ4 139 aaKnown RBP14.93□□□□□ -0.02
SQSTM1-211ENST00000506690 MMACHCQ9Y4U1 282 aa14.93□□□□□ -0.02
SQSTM1-211ENST00000506690 TMEM150CB9EJG8 249 aa14.92□□□□□ -0.02
SQSTM1-211ENST00000506690 PITX3O75364 302 aa14.92□□□□□ -0.02
SQSTM1-211ENST00000506690 HLA-DRB3P79483 266 aa14.92□□□□□ -0.02
SQSTM1-211ENST00000506690 GNMTQ14749 295 aa14.92□□□□□ -0.02
SQSTM1-211ENST00000506690 ABCA11PQ4W5N1 156 aa14.92□□□□□ -0.02
SQSTM1-211ENST00000506690 THEM4Q5T1C6 240 aa14.92□□□□□ -0.02
SQSTM1-211ENST00000506690 CLDND2Q8NHS1 167 aa14.92□□□□□ -0.02
SQSTM1-211ENST00000506690 TMEM234Q8WY98 164 aa14.92□□□□□ -0.02
SQSTM1-211ENST00000506690 FGF14Q92915 247 aa14.92□□□□□ -0.02
SQSTM1-211ENST00000506690 RAB24Q969Q5 203 aa14.92□□□□□ -0.02
SQSTM1-211ENST00000506690 VN1R1Q9GZP7 353 aa14.92□□□□□ -0.02
SQSTM1-211ENST00000506690 WWTR1Q9GZV5 400 aa14.92□□□□□ -0.02
SQSTM1-211ENST00000506690 HIPK2Q9H2X6 1198 aa14.92□□□□□ -0.02
SQSTM1-211ENST00000506690 PLEKHJ1Q9NW61 149 aa14.92□□□□□ -0.02
SQSTM1-211ENST00000506690 TMEM242Q9NWH2 141 aa14.92□□□□□ -0.02
SQSTM1-211ENST00000506690 POLR1DQ9Y2S0 133 aa14.92□□□□□ -0.02
SQSTM1-211ENST00000506690 FAM230AA0A1W2PPH8 454 aa14.92□□□□□ -0.02
SQSTM1-211ENST00000506690 DVL1O14640 695 aa14.92□□□□□ -0.02
SQSTM1-211ENST00000506690 TCAPO15273 167 aa14.92□□□□□ -0.02
SQSTM1-211ENST00000506690 TNFRSF4P43489 277 aa14.92□□□□□ -0.02
SQSTM1-211ENST00000506690 OR1D4P47884 311 aa14.92□□□□□ -0.02
SQSTM1-211ENST00000506690 GABREP78334 506 aa14.92□□□□□ -0.02
SQSTM1-211ENST00000506690 FAM57BQ71RH2 274 aa14.92□□□□□ -0.02
SQSTM1-211ENST00000506690 LGI3Q8N145 548 aa14.92□□□□□ -0.02
SQSTM1-211ENST00000506690 RNASEH2CQ8TDP1 164 aaKnown RBP14.92□□□□□ -0.02
SQSTM1-211ENST00000506690 NPRL2Q8WTW4 380 aa14.92□□□□□ -0.02
SQSTM1-211ENST00000506690 ZNF700Q9H0M5 742 aa14.92□□□□□ -0.02
SQSTM1-211ENST00000506690 NKX2-4Q9H2Z4 354 aa14.92□□□□□ -0.02
SQSTM1-211ENST00000506690 PITPNC1Q9UKF7 332 aa14.92□□□□□ -0.02
SQSTM1-211ENST00000506690 MYO7BQ6PIF6 2116 aa14.91□□□□□ -0.02
SQSTM1-211ENST00000506690 RP1P56715 2156 aa14.91□□□□□ -0.02
SQSTM1-211ENST00000506690 CCDC187A0A096LP49 1063 aa14.91□□□□□ -0.02
SQSTM1-211ENST00000506690 E9PLN8 166 aa14.91□□□□□ -0.02
SQSTM1-211ENST00000506690 QDPRP09417 244 aa14.91□□□□□ -0.02
SQSTM1-211ENST00000506690 FGF7P21781 194 aa14.91□□□□□ -0.02
SQSTM1-211ENST00000506690 SLC22A18ASQ8N1D0 253 aa14.91□□□□□ -0.02
SQSTM1-211ENST00000506690 OR10G4Q8NGN3 311 aa14.91□□□□□ -0.02
SQSTM1-211ENST00000506690 TMEM68Q96MH6 324 aa14.91□□□□□ -0.02
SQSTM1-211ENST00000506690 NOL4LQ96MY1 436 aaPredicted RBP14.91□□□□□ -0.02
SQSTM1-211ENST00000506690 NDUFAF3Q9BU61 184 aa14.91□□□□□ -0.02
SQSTM1-211ENST00000506690 CRLF2Q9HC73 371 aa14.91□□□□□ -0.02
SQSTM1-211ENST00000506690 SLC2A9Q9NRM0 540 aa14.91□□□□□ -0.02
SQSTM1-211ENST00000506690 SERINC1Q9NRX5 453 aa14.91□□□□□ -0.02
SQSTM1-211ENST00000506690 NECAP2Q9NVZ3 263 aa14.91□□□□□ -0.02
SQSTM1-211ENST00000506690 A0A1B0GWJ7 208 aa14.91□□□□□ -0.02
SQSTM1-211ENST00000506690 FAM24AA6NFZ4 105 aa14.91□□□□□ -0.02
SQSTM1-211ENST00000506690 SEMA4FO95754 770 aa14.91□□□□□ -0.02
SQSTM1-211ENST00000506690 GZMBP10144 247 aa14.91□□□□□ -0.02
SQSTM1-211ENST00000506690 ZNF133P52736 654 aaPredicted RBP14.91□□□□□ -0.02
SQSTM1-211ENST00000506690 YAF2Q8IY57 180 aa14.91□□□□□ -0.02
SQSTM1-211ENST00000506690 BEND2Q8NDZ0 799 aa14.91□□□□□ -0.02
SQSTM1-211ENST00000506690 OR5L2Q8NGL0 311 aa14.91□□□□□ -0.02
SQSTM1-211ENST00000506690 TMEM171Q8WVE6 324 aa14.91□□□□□ -0.02
SQSTM1-211ENST00000506690 RBMXL1Q96E39 390 aaKnown RBP14.91□□□□□ -0.02
SQSTM1-211ENST00000506690 B3GAT1Q9P2W7 334 aa14.91□□□□□ -0.02
SQSTM1-211ENST00000506690 IGSF23A1L1A6 192 aa14.9□□□□□ -0.02
SQSTM1-211ENST00000506690 RER1O15258 196 aa14.9□□□□□ -0.02
SQSTM1-211ENST00000506690 ATXN7O15265 892 aaPredicted RBP14.9□□□□□ -0.02
SQSTM1-211ENST00000506690 IGLV3-1P01715 115 aa14.9□□□□□ -0.02
SQSTM1-211ENST00000506690 PGA4P0DJD7 388 aa14.9□□□□□ -0.02
SQSTM1-211ENST00000506690 PGA5P0DJD9 388 aa14.9□□□□□ -0.02
SQSTM1-211ENST00000506690 GABRR1P24046 479 aa14.9□□□□□ -0.02
SQSTM1-211ENST00000506690 CDAP32320 146 aa14.9□□□□□ -0.02
SQSTM1-211ENST00000506690 NUTF2P61970 127 aaKnown RBP14.9□□□□□ -0.02
SQSTM1-211ENST00000506690 MFAP5Q13361 173 aa14.9□□□□□ -0.02
SQSTM1-211ENST00000506690 OR8G1Q15617 311 aa14.9□□□□□ -0.02
SQSTM1-211ENST00000506690 C4orf17Q53FE4 359 aa14.9□□□□□ -0.02
SQSTM1-211ENST00000506690 ZNF542PQ5EBM4 170 aa14.9□□□□□ -0.02
SQSTM1-211ENST00000506690 C5orf24Q7Z6I8 188 aa14.9□□□□□ -0.02
SQSTM1-211ENST00000506690 D2HGDHQ8N465 521 aa14.9□□□□□ -0.02
SQSTM1-211ENST00000506690 PLPP5Q8NEB5 264 aa14.9□□□□□ -0.02
SQSTM1-211ENST00000506690 LIN37Q96GY3 246 aaPredicted RBP14.9□□□□□ -0.02
SQSTM1-211ENST00000506690 SNX22Q96L94 193 aa14.9□□□□□ -0.02
SQSTM1-211ENST00000506690 NUDT22Q9BRQ3 303 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms